RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 ANKRD20A2Q5SQ80 823 aa17.73■□□□□ 0.43
C9orf3-206ENST00000428313 ANKRD20A1Q5TYW2 823 aa17.73■□□□□ 0.43
C9orf3-206ENST00000428313 ANKRD20A3Q5VUR7 823 aa17.73■□□□□ 0.43
C9orf3-206ENST00000428313 PIGWQ7Z7B1 504 aa17.73■□□□□ 0.43
C9orf3-206ENST00000428313 HOMEZQ8IX15 550 aa17.73■□□□□ 0.43
C9orf3-206ENST00000428313 XPO6Q96QU8 1125 aaKnown RBP17.73■□□□□ 0.43
C9orf3-206ENST00000428313 CWC25Q9NXE8 425 aaPredicted RBP17.73■□□□□ 0.43
C9orf3-206ENST00000428313 XDHP47989 1333 aa17.73■□□□□ 0.43
C9orf3-206ENST00000428313 VIMP08670 466 aaKnown RBP17.73■□□□□ 0.43
C9orf3-206ENST00000428313 CDC25CP30307 473 aa17.73■□□□□ 0.43
C9orf3-206ENST00000428313 KIF5BP33176 963 aa17.73■□□□□ 0.43
C9orf3-206ENST00000428313 CCDC57Q2TAC2 916 aa17.73■□□□□ 0.43
C9orf3-206ENST00000428313 CMPK2Q5EBM0 449 aa17.73■□□□□ 0.43
C9orf3-206ENST00000428313 SPATA21Q7Z572 469 aa17.73■□□□□ 0.43
C9orf3-206ENST00000428313 NGDNQ8NEJ9 315 aaKnown RBP17.73■□□□□ 0.43
C9orf3-206ENST00000428313 EXOC1Q9NV70 894 aa17.73■□□□□ 0.43
C9orf3-206ENST00000428313 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.73■□□□□ 0.43
C9orf3-206ENST00000428313 TMEM94Q12767 1356 aa17.73■□□□□ 0.43
C9orf3-206ENST00000428313 SMIM24O75264 130 aa17.72■□□□□ 0.43
C9orf3-206ENST00000428313 CNGA1P29973 690 aa17.72■□□□□ 0.43
C9orf3-206ENST00000428313 CTNNA1P35221 906 aaKnown RBP17.72■□□□□ 0.43
C9orf3-206ENST00000428313 UAP1Q16222 522 aaPredicted RBP17.72■□□□□ 0.43
C9orf3-206ENST00000428313 CYB5R4Q7L1T6 521 aa17.72■□□□□ 0.43
C9orf3-206ENST00000428313 RNF10Q8N5U6 811 aaKnown RBP17.72■□□□□ 0.43
C9orf3-206ENST00000428313 B4GALNT2Q8NHY0 566 aa17.72■□□□□ 0.43
C9orf3-206ENST00000428313 A0A0G2JS52 829 aa17.72■□□□□ 0.43
C9orf3-206ENST00000428313 TRIM75PA6NK02 468 aa17.72■□□□□ 0.43
C9orf3-206ENST00000428313 PPFIA2O75334 1257 aa17.72■□□□□ 0.43
C9orf3-206ENST00000428313 SDCCAG8Q86SQ7 713 aaPredicted RBP17.72■□□□□ 0.43
C9orf3-206ENST00000428313 TRIM74Q86UV6 250 aa17.72■□□□□ 0.43
C9orf3-206ENST00000428313 TRIM73Q86UV7 250 aa17.72■□□□□ 0.43
C9orf3-206ENST00000428313 NEUROD6Q96NK8 337 aa17.72■□□□□ 0.43
C9orf3-206ENST00000428313 ZNF317Q96PQ6 595 aaPredicted RBP17.72■□□□□ 0.43
C9orf3-206ENST00000428313 METTL22Q9BUU2 404 aaPredicted RBP17.72■□□□□ 0.43
C9orf3-206ENST00000428313 LAMB4A4D0S4 1761 aa17.71■□□□□ 0.43
C9orf3-206ENST00000428313 LRRD1A4D1F6 860 aa17.71■□□□□ 0.43
C9orf3-206ENST00000428313 ATP2A2P16615 1042 aaKnown RBP17.71■□□□□ 0.43
C9orf3-206ENST00000428313 ZNF131P52739 623 aa17.71■□□□□ 0.43
C9orf3-206ENST00000428313 TNNC1P63316 161 aa17.71■□□□□ 0.43
C9orf3-206ENST00000428313 MRPS35P82673 323 aaKnown RBP17.71■□□□□ 0.43
C9orf3-206ENST00000428313 LBRQ14739 615 aaKnown RBP17.71■□□□□ 0.43
C9orf3-206ENST00000428313 TRPM8Q7Z2W7 1104 aa17.71■□□□□ 0.43
C9orf3-206ENST00000428313 ARHGAP22Q7Z5H3 698 aa17.71■□□□□ 0.43
C9orf3-206ENST00000428313 NAF1Q96HR8 494 aaKnown RBP17.71■□□□□ 0.43
C9orf3-206ENST00000428313 PSMB7Q99436 277 aa17.71■□□□□ 0.43
C9orf3-206ENST00000428313 MAGEC2Q9UBF1 373 aaPredicted RBP17.71■□□□□ 0.43
C9orf3-206ENST00000428313 KCNJ14Q9UNX9 436 aa17.71■□□□□ 0.43
C9orf3-206ENST00000428313 AFDNP55196 1824 aaKnown RBP17.71■□□□□ 0.43
C9orf3-206ENST00000428313 GPR75-ASB3A0A0A6YYF3 556 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 PDLIM1O00151 329 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 BACH1O14867 736 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 NCK2O43639 380 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 WFS1O76024 890 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 SGSM1Q2NKQ1 1148 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 AKAP4Q5JQC9 854 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 KLHDC7AQ5VTJ3 777 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 TRIM22Q8IYM9 498 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 KRT12Q99456 494 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 GORASP1Q9BQQ3 440 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 NOVA2Q9UNW9 492 aaKnown RBP17.7■□□□□ 0.42
C9orf3-206ENST00000428313 TBX22Q9Y458 520 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 ASB3Q9Y575 518 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 NFAT5O94916 1531 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 RGPD8O14715 1765 aaPredicted RBP17.7■□□□□ 0.42
C9orf3-206ENST00000428313 FLOT1O75955 427 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 RNF8O76064 485 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 ARID4AP29374 1257 aaPredicted RBP17.7■□□□□ 0.42
C9orf3-206ENST00000428313 ECHS1P30084 290 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 ALDH5A1P51649 535 aaPredicted RBP17.7■□□□□ 0.42
C9orf3-206ENST00000428313 FAM69CQ0P6D2 419 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 AIMP1Q12904 312 aaKnown RBP17.7■□□□□ 0.42
C9orf3-206ENST00000428313 TAF11Q15544 211 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 GNPTABQ3T906 1256 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 KRT26Q7Z3Y9 468 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 ADSSL1Q8N142 457 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 FAM81AQ8TBF8 368 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 IGDCC4Q8TDY8 1250 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 APPBP2Q92624 585 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 DTNBP1Q96EV8 351 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 NOX5Q96PH1 765 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 EPAS1Q99814 870 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 LY9Q9HBG7 655 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 CCDC9Q9Y3X0 531 aaKnown RBP17.7■□□□□ 0.42
C9orf3-206ENST00000428313 MYH7BA7E2Y1 1941 aa17.7■□□□□ 0.42
C9orf3-206ENST00000428313 UBE2Q2LH0YL09 131 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 PYGLP06737 847 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 IMPDH2P12268 514 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 LIFRP42702 1097 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 PRCPP42785 496 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 KIF11P52732 1056 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 MAGOHP61326 146 aaKnown RBP17.69■□□□□ 0.42
C9orf3-206ENST00000428313 LMNB2Q03252 620 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 PDIA6Q15084 440 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 PDXDC2PQ6P474 469 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 NFXL1Q6ZNB6 911 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 MAGOHBQ96A72 148 aaKnown RBP17.69■□□□□ 0.42
C9orf3-206ENST00000428313 TLCD1Q96CP7 247 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 BICD1Q96G01 975 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 MS4A14Q96JA4 679 aa17.69■□□□□ 0.42
C9orf3-206ENST00000428313 PLAGL2Q9UPG8 496 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms