RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 IWS1Q96ST2 819 aa19.3■□□□□ 0.68
VRK2-204ENST00000428021 TSEN34Q9BSV6 310 aaKnown RBP19.3■□□□□ 0.68
VRK2-204ENST00000428021 PXMP2Q9NR77 195 aa19.3■□□□□ 0.68
VRK2-204ENST00000428021 NR2E3Q9Y5X4 410 aa19.3■□□□□ 0.68
VRK2-204ENST00000428021 CNTNAP5Q8WYK1 1306 aa19.29■□□□□ 0.68
VRK2-204ENST00000428021 GOLGA8AA7E2F4 631 aa19.29■□□□□ 0.68
VRK2-204ENST00000428021 GOLGA8BA8MQT2 603 aa19.29■□□□□ 0.68
VRK2-204ENST00000428021 GCOM1H8Y6P7 765 aaPredicted RBP19.29■□□□□ 0.68
VRK2-204ENST00000428021 C6orf222P0C671 652 aaPredicted RBP19.29■□□□□ 0.68
VRK2-204ENST00000428021 POLR2MP0CAP2 368 aa19.29■□□□□ 0.68
VRK2-204ENST00000428021 KCNA10Q16322 511 aa19.29■□□□□ 0.68
VRK2-204ENST00000428021 DUSP28Q4G0W2 176 aa19.29■□□□□ 0.68
VRK2-204ENST00000428021 SLC39A5Q6ZMH5 540 aa19.29■□□□□ 0.68
VRK2-204ENST00000428021 NOL8Q76FK4 1167 aaKnown RBP19.29■□□□□ 0.68
VRK2-204ENST00000428021 MPHOSPH6Q99547 160 aaKnown RBP19.29■□□□□ 0.68
VRK2-204ENST00000428021 WDR11Q9BZH6 1224 aa19.29■□□□□ 0.68
VRK2-204ENST00000428021 SEC63Q9UGP8 760 aaKnown RBP19.29■□□□□ 0.68
VRK2-204ENST00000428021 B4DLN1 442 aa19.28■□□□□ 0.68
VRK2-204ENST00000428021 SEC24BO95487 1268 aa19.28■□□□□ 0.68
VRK2-204ENST00000428021 EIF2AK2P19525 551 aaKnown RBP19.28■□□□□ 0.68
VRK2-204ENST00000428021 ADD1P35611 737 aaKnown RBP19.28■□□□□ 0.68
VRK2-204ENST00000428021 MRPL12P52815 198 aaKnown RBP19.28■□□□□ 0.68
VRK2-204ENST00000428021 ACLYP53396 1101 aa19.28■□□□□ 0.68
VRK2-204ENST00000428021 EVCP57679 992 aa19.28■□□□□ 0.68
VRK2-204ENST00000428021 TOB2Q14106 344 aaPredicted RBP19.28■□□□□ 0.68
VRK2-204ENST00000428021 SNX17Q15036 470 aa19.28■□□□□ 0.68
VRK2-204ENST00000428021 ARHGEF16Q5VV41 709 aa19.28■□□□□ 0.68
VRK2-204ENST00000428021 TLK2Q86UE8 772 aa19.28■□□□□ 0.68
VRK2-204ENST00000428021 Q9Y3F1 56 aa19.28■□□□□ 0.68
VRK2-204ENST00000428021 CYP46A1Q9Y6A2 500 aa19.28■□□□□ 0.68
VRK2-204ENST00000428021 NID2Q14112 1375 aa19.28■□□□□ 0.68
VRK2-204ENST00000428021 A0A1W2PQ45 241 aaPredicted RBP19.27■□□□□ 0.68
VRK2-204ENST00000428021 A0A1W2PQY0 241 aa19.27■□□□□ 0.68
VRK2-204ENST00000428021 DYNC1LI2O43237 492 aaPredicted RBP19.27■□□□□ 0.68
VRK2-204ENST00000428021 NR3C2P08235 984 aa19.27■□□□□ 0.68
VRK2-204ENST00000428021 BEX3Q00994 111 aa19.27■□□□□ 0.68
VRK2-204ENST00000428021 GNASQ5JWF2 1037 aa19.27■□□□□ 0.68
VRK2-204ENST00000428021 PDCD2LQ9BRP1 358 aa19.27■□□□□ 0.68
VRK2-204ENST00000428021 UPF3BQ9BZI7 483 aaKnown RBP19.27■□□□□ 0.68
VRK2-204ENST00000428021 SPC25Q9HBM1 224 aa19.27■□□□□ 0.68
VRK2-204ENST00000428021 NAP1L2Q9ULW6 460 aaPredicted RBP19.27■□□□□ 0.68
VRK2-204ENST00000428021 KIAA1217Q5T5P2 1943 aa19.27■□□□□ 0.67
VRK2-204ENST00000428021 MOXD2PA6NHM9 499 aa19.26■□□□□ 0.67
VRK2-204ENST00000428021 MEIS2O14770 477 aa19.26■□□□□ 0.67
VRK2-204ENST00000428021 ARIH2O95376 493 aa19.26■□□□□ 0.67
VRK2-204ENST00000428021 ASGR1P07306 291 aa19.26■□□□□ 0.67
VRK2-204ENST00000428021 METAP2P50579 478 aaKnown RBP eCLIP19.26■□□□□ 0.67
VRK2-204ENST00000428021 RTP1P59025 263 aa19.26■□□□□ 0.67
VRK2-204ENST00000428021 PPP2R5BQ15173 497 aa19.26■□□□□ 0.67
VRK2-204ENST00000428021 STXBP2Q15833 593 aa19.26■□□□□ 0.67
VRK2-204ENST00000428021 C1orf53Q5VUE5 145 aa19.26■□□□□ 0.67
VRK2-204ENST00000428021 CCDC62Q6P9F0 684 aa19.26■□□□□ 0.67
VRK2-204ENST00000428021 FCHSD1Q86WN1 690 aa19.26■□□□□ 0.67
VRK2-204ENST00000428021 PCSK9Q8NBP7 692 aaKnown RBP19.26■□□□□ 0.67
VRK2-204ENST00000428021 IL31RAQ8NI17 732 aa19.26■□□□□ 0.67
VRK2-204ENST00000428021 SCFD2Q8WU76 684 aa19.26■□□□□ 0.67
VRK2-204ENST00000428021 V9GY48 417 aaPredicted RBP19.26■□□□□ 0.67
VRK2-204ENST00000428021 PIK3CDO00329 1044 aa19.25■□□□□ 0.67
VRK2-204ENST00000428021 EIF3JO75822 258 aaKnown RBP19.25■□□□□ 0.67
VRK2-204ENST00000428021 PDIA3P30101 505 aaKnown RBP19.25■□□□□ 0.67
VRK2-204ENST00000428021 PGM5Q15124 567 aa19.25■□□□□ 0.67
VRK2-204ENST00000428021 FSCN1Q16658 493 aaKnown RBP19.25■□□□□ 0.67
VRK2-204ENST00000428021 USP17L6PQ6QN14 398 aa19.25■□□□□ 0.67
VRK2-204ENST00000428021 VSIG10LQ86VR7 867 aa19.25■□□□□ 0.67
VRK2-204ENST00000428021 GPKOWQ92917 476 aaPredicted RBP eCLIP19.25■□□□□ 0.67
VRK2-204ENST00000428021 IL17RAQ96F46 866 aa19.25■□□□□ 0.67
VRK2-204ENST00000428021 AP5M1Q9H0R1 490 aa19.25■□□□□ 0.67
VRK2-204ENST00000428021 ZMYND8Q9ULU4 1186 aaPredicted RBP19.25■□□□□ 0.67
VRK2-204ENST00000428021 FRMPD4Q14CM0 1322 aa19.25■□□□□ 0.67
VRK2-204ENST00000428021 RGS20O76081 388 aa19.24■□□□□ 0.67
VRK2-204ENST00000428021 ANAPC15P60006 121 aa19.24■□□□□ 0.67
VRK2-204ENST00000428021 TRIM60Q495X7 471 aa19.24■□□□□ 0.67
VRK2-204ENST00000428021 WWC2Q6AWC2 1192 aa19.24■□□□□ 0.67
VRK2-204ENST00000428021 TYW1BQ6NUM6 668 aa19.24■□□□□ 0.67
VRK2-204ENST00000428021 SEPT14Q6ZU15 432 aa19.24■□□□□ 0.67
VRK2-204ENST00000428021 HEATR3Q7Z4Q2 680 aa19.24■□□□□ 0.67
VRK2-204ENST00000428021 COPS5Q92905 334 aa19.24■□□□□ 0.67
VRK2-204ENST00000428021 PCDH10Q9P2E7 1040 aa19.24■□□□□ 0.67
VRK2-204ENST00000428021 RANBP2P49792 3224 aaKnown RBP19.23■□□□□ 0.67
VRK2-204ENST00000428021 CCDC196A0A1B0GTZ2 297 aa19.23■□□□□ 0.67
VRK2-204ENST00000428021 NKRFO15226 690 aaKnown RBP eCLIP19.23■□□□□ 0.67
VRK2-204ENST00000428021 TXNP10599 105 aaKnown RBP19.23■□□□□ 0.67
VRK2-204ENST00000428021 SYN1P17600 705 aa19.23■□□□□ 0.67
VRK2-204ENST00000428021 TTLL4Q14679 1199 aa19.23■□□□□ 0.67
VRK2-204ENST00000428021 NTRK3Q16288 839 aa19.23■□□□□ 0.67
VRK2-204ENST00000428021 LARP6Q9BRS8 491 aaKnown RBP19.23■□□□□ 0.67
VRK2-204ENST00000428021 PSTPIP2Q9H939 334 aa19.23■□□□□ 0.67
VRK2-204ENST00000428021 PDRG1Q9NUG6 133 aa19.23■□□□□ 0.67
VRK2-204ENST00000428021 ATP11BQ9Y2G3 1177 aa19.23■□□□□ 0.67
VRK2-204ENST00000428021 ELP1O95163 1332 aa19.23■□□□□ 0.67
VRK2-204ENST00000428021 MYCLP12524 364 aaPredicted RBP19.22■□□□□ 0.67
VRK2-204ENST00000428021 TLE2Q04725 743 aa19.22■□□□□ 0.67
VRK2-204ENST00000428021 LY6KQ17RY6 165 aa19.22■□□□□ 0.67
VRK2-204ENST00000428021 C8orf34Q49A92 452 aa19.22■□□□□ 0.67
VRK2-204ENST00000428021 OR6J1Q8NGC5 347 aa19.22■□□□□ 0.67
VRK2-204ENST00000428021 PRO3102Q9H379 93 aa19.22■□□□□ 0.67
VRK2-204ENST00000428021 NCOA5Q9HCD5 579 aaKnown RBP19.22■□□□□ 0.67
VRK2-204ENST00000428021 STARD7Q9NQZ5 370 aa19.22■□□□□ 0.67
VRK2-204ENST00000428021 STXBP3O00186 592 aa19.21■□□□□ 0.67
VRK2-204ENST00000428021 EIF5BO60841 1220 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms