RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 COL20A1Q9P218 1284 aa15.28■□□□□ 0.04
DEPDC7-203ENST00000427755 CUL9Q8IWT3 2517 aa15.27■□□□□ 0.04
DEPDC7-203ENST00000427755 TNKSO95271 1327 aa15.27■□□□□ 0.04
DEPDC7-203ENST00000427755 ABCB11O95342 1321 aa15.27■□□□□ 0.04
DEPDC7-203ENST00000427755 CYP2C9P11712 490 aa15.27■□□□□ 0.04
DEPDC7-203ENST00000427755 IMMTQ16891 758 aaKnown RBP15.27■□□□□ 0.04
DEPDC7-203ENST00000427755 QRICH1Q2TAL8 776 aa15.27■□□□□ 0.04
DEPDC7-203ENST00000427755 NBPF20Q3BBV1 942 aa15.27■□□□□ 0.04
DEPDC7-203ENST00000427755 ASPRV1Q53RT3 343 aa15.27■□□□□ 0.04
DEPDC7-203ENST00000427755 CCDC62Q6P9F0 684 aa15.27■□□□□ 0.04
DEPDC7-203ENST00000427755 OTOP2Q7RTS6 562 aa15.27■□□□□ 0.04
DEPDC7-203ENST00000427755 USP38Q8NB14 1042 aa15.27■□□□□ 0.04
DEPDC7-203ENST00000427755 SYTL5Q8TDW5 730 aaPredicted RBP15.27■□□□□ 0.04
DEPDC7-203ENST00000427755 SCLYQ96I15 445 aa15.27■□□□□ 0.04
DEPDC7-203ENST00000427755 MPHOSPH6Q99547 160 aaKnown RBP15.27■□□□□ 0.04
DEPDC7-203ENST00000427755 CTNNA3Q9UI47 895 aa15.27■□□□□ 0.04
DEPDC7-203ENST00000427755 SUPT20HL2P0C7V6 817 aa15.26■□□□□ 0.03
DEPDC7-203ENST00000427755 TXNP10599 105 aaKnown RBP15.26■□□□□ 0.03
DEPDC7-203ENST00000427755 GSPT1P15170 499 aaKnown RBP15.26■□□□□ 0.03
DEPDC7-203ENST00000427755 PDE4AP27815 886 aa15.26■□□□□ 0.03
DEPDC7-203ENST00000427755 PPP1R13LQ8WUF5 828 aa15.26■□□□□ 0.03
DEPDC7-203ENST00000427755 TAAR1Q96RJ0 339 aa15.26■□□□□ 0.03
DEPDC7-203ENST00000427755 KRT23Q9C075 422 aa15.26■□□□□ 0.03
DEPDC7-203ENST00000427755 MTIF3Q9H2K0 278 aaKnown RBP15.26■□□□□ 0.03
DEPDC7-203ENST00000427755 JMJD4Q9H9V9 463 aa15.26■□□□□ 0.03
DEPDC7-203ENST00000427755 GPHNQ9NQX3 736 aaPredicted RBP15.26■□□□□ 0.03
DEPDC7-203ENST00000427755 YBX2Q9Y2T7 364 aaKnown RBP15.26■□□□□ 0.03
DEPDC7-203ENST00000427755 EYSQ5T1H1 3165 aa15.26■□□□□ 0.03
DEPDC7-203ENST00000427755 RAD50Q92878 1312 aa15.25■□□□□ 0.03
DEPDC7-203ENST00000427755 B4DLN1 442 aa15.25■□□□□ 0.03
DEPDC7-203ENST00000427755 KPNA6O60684 536 aa15.25■□□□□ 0.03
DEPDC7-203ENST00000427755 PARP1P09874 1014 aaKnown RBP15.25■□□□□ 0.03
DEPDC7-203ENST00000427755 MRPL12P52815 198 aaKnown RBP15.25■□□□□ 0.03
DEPDC7-203ENST00000427755 TTLL4Q14679 1199 aa15.25■□□□□ 0.03
DEPDC7-203ENST00000427755 SEC23AQ15436 765 aa15.25■□□□□ 0.03
DEPDC7-203ENST00000427755 RAB30Q15771 203 aa15.25■□□□□ 0.03
DEPDC7-203ENST00000427755 BRDTQ58F21 947 aaPredicted RBP15.25■□□□□ 0.03
DEPDC7-203ENST00000427755 NFRKBQ6P4R8 1299 aa15.25■□□□□ 0.03
DEPDC7-203ENST00000427755 RPUSD2Q8IZ73 545 aaKnown RBP15.25■□□□□ 0.03
DEPDC7-203ENST00000427755 STAG2Q8N3U4 1231 aa15.25■□□□□ 0.03
DEPDC7-203ENST00000427755 NKX2-4Q9H2Z4 354 aa15.25■□□□□ 0.03
DEPDC7-203ENST00000427755 PRDM12Q9H4Q4 367 aa15.25■□□□□ 0.03
DEPDC7-203ENST00000427755 CNNM2Q9H8M5 875 aa15.25■□□□□ 0.03
DEPDC7-203ENST00000427755 MSRAQ9UJ68 235 aa15.25■□□□□ 0.03
DEPDC7-203ENST00000427755 OPLAHO14841 1288 aa15.24■□□□□ 0.03
DEPDC7-203ENST00000427755 ADGRE1Q14246 886 aa15.24■□□□□ 0.03
DEPDC7-203ENST00000427755 CYB5R4Q7L1T6 521 aa15.24■□□□□ 0.03
DEPDC7-203ENST00000427755 FBXO11Q86XK2 927 aa15.24■□□□□ 0.03
DEPDC7-203ENST00000427755 MCF2L2Q86YR7 1114 aa15.24■□□□□ 0.03
DEPDC7-203ENST00000427755 NSUN6Q8TEA1 469 aaKnown RBP15.24■□□□□ 0.03
DEPDC7-203ENST00000427755 MTMR8Q96EF0 704 aa15.24■□□□□ 0.03
DEPDC7-203ENST00000427755 UBAC1Q9BSL1 405 aa15.24■□□□□ 0.03
DEPDC7-203ENST00000427755 MRPL11Q9Y3B7 192 aaKnown RBP15.24■□□□□ 0.03
DEPDC7-203ENST00000427755 VCANP13611 3396 aa15.24■□□□□ 0.03
DEPDC7-203ENST00000427755 PPP1R11O60927 126 aaPredicted RBP15.23■□□□□ 0.03
DEPDC7-203ENST00000427755 PFKMP08237 780 aa15.23■□□□□ 0.03
DEPDC7-203ENST00000427755 RABGGTBP53611 331 aa15.23■□□□□ 0.03
DEPDC7-203ENST00000427755 GHRHRQ02643 423 aa15.23■□□□□ 0.03
DEPDC7-203ENST00000427755 PTPN11Q06124 597 aaPredicted RBP15.23■□□□□ 0.03
DEPDC7-203ENST00000427755 ARHGAP1Q07960 439 aa15.23■□□□□ 0.03
DEPDC7-203ENST00000427755 LY6KQ17RY6 165 aa15.23■□□□□ 0.03
DEPDC7-203ENST00000427755 SLC35G1Q2M3R5 365 aa15.23■□□□□ 0.03
DEPDC7-203ENST00000427755 FAM47CQ5HY64 1035 aa15.23■□□□□ 0.03
DEPDC7-203ENST00000427755 IFIT1BQ5T764 474 aaKnown RBP15.23■□□□□ 0.03
DEPDC7-203ENST00000427755 TTC22Q5TAA0 569 aa15.23■□□□□ 0.03
DEPDC7-203ENST00000427755 SEPT14Q6ZU15 432 aa15.23■□□□□ 0.03
DEPDC7-203ENST00000427755 AFG1LQ8WV93 481 aa15.23■□□□□ 0.03
DEPDC7-203ENST00000427755 CTAGE1Q96RT6 745 aa15.23■□□□□ 0.03
DEPDC7-203ENST00000427755 IWS1Q96ST2 819 aa15.23■□□□□ 0.03
DEPDC7-203ENST00000427755 RMDN3Q96TC7 470 aa15.23■□□□□ 0.03
DEPDC7-203ENST00000427755 VAT1LQ9HCJ6 419 aa15.23■□□□□ 0.03
DEPDC7-203ENST00000427755 PITPNM1O00562 1244 aa15.22■□□□□ 0.03
DEPDC7-203ENST00000427755 MMP3P08254 477 aa15.22■□□□□ 0.03
DEPDC7-203ENST00000427755 HSD17B4P51659 736 aa15.22■□□□□ 0.03
DEPDC7-203ENST00000427755 STXBP2Q15833 593 aa15.22■□□□□ 0.03
DEPDC7-203ENST00000427755 DEFB128Q7Z7B8 93 aa15.22■□□□□ 0.03
DEPDC7-203ENST00000427755 KAT2BQ92831 832 aa15.22■□□□□ 0.03
DEPDC7-203ENST00000427755 GAS2L1Q99501 681 aaPredicted RBP15.22■□□□□ 0.03
DEPDC7-203ENST00000427755 PRDM6Q9NQX0 595 aa15.22■□□□□ 0.03
DEPDC7-203ENST00000427755 MAD2L2Q9UI95 211 aa15.22■□□□□ 0.03
DEPDC7-203ENST00000427755 SLC4A7Q9Y6M7 1214 aa15.22■□□□□ 0.03
DEPDC7-203ENST00000427755 PALM3A6NDB9 673 aaPredicted RBP15.21■□□□□ 0.03
DEPDC7-203ENST00000427755 KLRF2D3W0D1 207 aa15.21■□□□□ 0.03
DEPDC7-203ENST00000427755 DHX16O60231 1041 aaKnown RBP15.21■□□□□ 0.03
DEPDC7-203ENST00000427755 GH1P01241 217 aa15.21■□□□□ 0.03
DEPDC7-203ENST00000427755 NR3C2P08235 984 aa15.21■□□□□ 0.03
DEPDC7-203ENST00000427755 IQCF3P0C7M6 154 aa15.21■□□□□ 0.03
DEPDC7-203ENST00000427755 MYOGP15173 224 aa15.21■□□□□ 0.03
DEPDC7-203ENST00000427755 ATP2A2P16615 1042 aaKnown RBP15.21■□□□□ 0.03
DEPDC7-203ENST00000427755 EIF2AK2P19525 551 aaKnown RBP15.21■□□□□ 0.03
DEPDC7-203ENST00000427755 ARHGEF16Q5VV41 709 aa15.21■□□□□ 0.03
DEPDC7-203ENST00000427755 SESTD1Q86VW0 696 aa15.21■□□□□ 0.03
DEPDC7-203ENST00000427755 AMNQ9BXJ7 453 aa15.21■□□□□ 0.03
DEPDC7-203ENST00000427755 SLC28A3Q9HAS3 691 aa15.21■□□□□ 0.03
DEPDC7-203ENST00000427755 PXMP2Q9NR77 195 aa15.21■□□□□ 0.03
DEPDC7-203ENST00000427755 DDX41Q9UJV9 622 aaKnown RBP15.21■□□□□ 0.03
DEPDC7-203ENST00000427755 PCDHA11Q9Y5I1 949 aa15.21■□□□□ 0.03
DEPDC7-203ENST00000427755 LAMA4Q16363 1823 aa15.21■□□□□ 0.03
DEPDC7-203ENST00000427755 SPTBN5Q9NRC6 3674 aaKnown RBP15.21■□□□□ 0.02
DEPDC7-203ENST00000427755 SCN10AQ9Y5Y9 1956 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms