RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 KIF5BP33176 963 aa21.38■■□□□ 1.01
GPC1-205ENST00000427506 CPT1AP50416 773 aa21.38■■□□□ 1.01
GPC1-205ENST00000427506 ZNF654Q8IZM8 581 aa21.38■■□□□ 1.01
GPC1-205ENST00000427506 TMTC2Q8N394 836 aa21.38■■□□□ 1.01
GPC1-205ENST00000427506 PIBF1Q8WXW3 757 aa21.38■■□□□ 1.01
GPC1-205ENST00000427506 MYL10Q9BUA6 226 aa21.38■■□□□ 1.01
GPC1-205ENST00000427506 DNAH12Q6ZR08 3092 aa21.37■■□□□ 1.01
GPC1-205ENST00000427506 LTBP2Q14767 1821 aa21.37■■□□□ 1.01
GPC1-205ENST00000427506 PNMA6FA0A0J9YX94 578 aa21.37■■□□□ 1.01
GPC1-205ENST00000427506 DDAH1O94760 285 aa21.37■■□□□ 1.01
GPC1-205ENST00000427506 EIF2AK2P19525 551 aaKnown RBP21.37■■□□□ 1.01
GPC1-205ENST00000427506 ITGB8P26012 769 aa21.37■■□□□ 1.01
GPC1-205ENST00000427506 ITGA7Q13683 1181 aa21.37■■□□□ 1.01
GPC1-205ENST00000427506 TTLL4Q14679 1199 aa21.37■■□□□ 1.01
GPC1-205ENST00000427506 STXBP2Q15833 593 aa21.37■■□□□ 1.01
GPC1-205ENST00000427506 SLC35G1Q2M3R5 365 aa21.37■■□□□ 1.01
GPC1-205ENST00000427506 BRDTQ58F21 947 aaPredicted RBP21.37■■□□□ 1.01
GPC1-205ENST00000427506 SEPT14Q6ZU15 432 aa21.37■■□□□ 1.01
GPC1-205ENST00000427506 IWS1Q96ST2 819 aa21.37■■□□□ 1.01
GPC1-205ENST00000427506 POLR3EQ9NVU0 708 aa21.37■■□□□ 1.01
GPC1-205ENST00000427506 RANBP2P49792 3224 aaKnown RBP21.36■■□□□ 1.01
GPC1-205ENST00000427506 SH2B2O14492 632 aaPredicted RBP21.36■■□□□ 1.01
GPC1-205ENST00000427506 CYTH3O43739 400 aa21.36■■□□□ 1.01
GPC1-205ENST00000427506 MYL3P08590 195 aa21.36■■□□□ 1.01
GPC1-205ENST00000427506 MAP3K14Q99558 947 aa21.36■■□□□ 1.01
GPC1-205ENST00000427506 MAP3K20Q9NYL2 800 aaKnown RBP21.36■■□□□ 1.01
GPC1-205ENST00000427506 MYH6P13533 1939 aa21.35■■□□□ 1.01
GPC1-205ENST00000427506 OPLAHO14841 1288 aa21.35■■□□□ 1.01
GPC1-205ENST00000427506 HOXA13P31271 388 aaPredicted RBP21.35■■□□□ 1.01
GPC1-205ENST00000427506 HSD17B4P51659 736 aa21.35■■□□□ 1.01
GPC1-205ENST00000427506 PSMC6P62333 389 aa21.35■■□□□ 1.01
GPC1-205ENST00000427506 FPGSQ05932 587 aa21.35■■□□□ 1.01
GPC1-205ENST00000427506 SHHQ15465 462 aa21.35■■□□□ 1.01
GPC1-205ENST00000427506 FAM126BQ8IXS8 530 aa21.35■■□□□ 1.01
GPC1-205ENST00000427506 SAMD3Q8N6K7 520 aa21.35■■□□□ 1.01
GPC1-205ENST00000427506 COPS5Q92905 334 aa21.35■■□□□ 1.01
GPC1-205ENST00000427506 PXMP2Q9NR77 195 aa21.35■■□□□ 1.01
GPC1-205ENST00000427506 GCOM1H8Y6P7 765 aaPredicted RBP21.34■■□□□ 1.01
GPC1-205ENST00000427506 TIMP1P01033 207 aa21.34■■□□□ 1.01
GPC1-205ENST00000427506 POLR2MP0CAP2 368 aa21.34■■□□□ 1.01
GPC1-205ENST00000427506 GNAQP50148 359 aa21.34■■□□□ 1.01
GPC1-205ENST00000427506 SLC43A3Q8NBI5 491 aa21.34■■□□□ 1.01
GPC1-205ENST00000427506 RRP36Q96EU6 259 aaKnown RBP21.34■■□□□ 1.01
GPC1-205ENST00000427506 LZTS2Q9BRK4 669 aa21.34■■□□□ 1.01
GPC1-205ENST00000427506 SEZ6LQ9BYH1 1024 aa21.34■■□□□ 1.01
GPC1-205ENST00000427506 LRRC2Q9BYS8 371 aa21.34■■□□□ 1.01
GPC1-205ENST00000427506 TBX21Q9UL17 535 aa21.34■■□□□ 1.01
GPC1-205ENST00000427506 SLC12A7Q9Y666 1083 aa21.34■■□□□ 1.01
GPC1-205ENST00000427506 ARIH2O95376 493 aa21.33■■□□□ 1.01
GPC1-205ENST00000427506 NR3C2P08235 984 aa21.33■■□□□ 1.01
GPC1-205ENST00000427506 CALM1P0DP23 149 aa21.33■■□□□ 1.01
GPC1-205ENST00000427506 CALM2P0DP24 149 aa21.33■■□□□ 1.01
GPC1-205ENST00000427506 CALM3P0DP25 149 aa21.33■■□□□ 1.01
GPC1-205ENST00000427506 MYCLP12524 364 aaPredicted RBP21.33■■□□□ 1.01
GPC1-205ENST00000427506 LIFRP42702 1097 aa21.33■■□□□ 1.01
GPC1-205ENST00000427506 COL9A3Q14050 684 aaPredicted RBP21.33■■□□□ 1.01
GPC1-205ENST00000427506 C9orf50Q5SZB4 431 aa21.33■■□□□ 1.01
GPC1-205ENST00000427506 NEK1Q96PY6 1258 aa21.33■■□□□ 1.01
GPC1-205ENST00000427506 MTG1Q9BT17 334 aaPredicted RBP21.33■■□□□ 1.01
GPC1-205ENST00000427506 PPP1R12CQ9BZL4 782 aa21.33■■□□□ 1.01
GPC1-205ENST00000427506 SEC63Q9UGP8 760 aaKnown RBP21.33■■□□□ 1.01
GPC1-205ENST00000427506 GRIN2DO15399 1336 aa21.32■■□□□ 1
GPC1-205ENST00000427506 EIF3JO75822 258 aaKnown RBP21.32■■□□□ 1
GPC1-205ENST00000427506 RXRAP19793 462 aa21.32■■□□□ 1
GPC1-205ENST00000427506 PURAQ00577 322 aaKnown RBP21.32■■□□□ 1
GPC1-205ENST00000427506 GHRHRQ02643 423 aa21.32■■□□□ 1
GPC1-205ENST00000427506 LY6KQ17RY6 165 aa21.32■■□□□ 1
GPC1-205ENST00000427506 MFSD5Q6N075 450 aa21.32■■□□□ 1
GPC1-205ENST00000427506 GPR153Q6NV75 609 aa21.32■■□□□ 1
GPC1-205ENST00000427506 SYNE3Q6ZMZ3 975 aa21.32■■□□□ 1
GPC1-205ENST00000427506 FCHSD1Q86WN1 690 aa21.32■■□□□ 1
GPC1-205ENST00000427506 RAB11FIP4Q86YS3 637 aa21.32■■□□□ 1
GPC1-205ENST00000427506 SPZ1Q9BXG8 430 aa21.32■■□□□ 1
GPC1-205ENST00000427506 KPNA6O60684 536 aa21.31■■□□□ 1
GPC1-205ENST00000427506 GH1P01241 217 aa21.31■■□□□ 1
GPC1-205ENST00000427506 CD4P01730 458 aa21.31■■□□□ 1
GPC1-205ENST00000427506 SMARCA1P28370 1054 aa21.31■■□□□ 1
GPC1-205ENST00000427506 CCDC62Q6P9F0 684 aa21.31■■□□□ 1
GPC1-205ENST00000427506 PDCD2LQ9BRP1 358 aa21.31■■□□□ 1
GPC1-205ENST00000427506 MRVI1Q9Y6F6 885 aa21.31■■□□□ 1
GPC1-205ENST00000427506 A6NJR5 290 aa21.3■■□□□ 1
GPC1-205ENST00000427506 PLEKHA8P1O95397 391 aa21.3■■□□□ 1
GPC1-205ENST00000427506 EPHB4P54760 987 aa21.3■■□□□ 1
GPC1-205ENST00000427506 FAM47CQ5HY64 1035 aa21.3■■□□□ 1
GPC1-205ENST00000427506 CMTR1Q8N1G2 835 aaKnown RBP21.3■■□□□ 1
GPC1-205ENST00000427506 TMEM199Q8N511 208 aa21.3■■□□□ 1
GPC1-205ENST00000427506 DEFB123Q8N688 67 aa21.3■■□□□ 1
GPC1-205ENST00000427506 RNPC3Q96LT9 517 aaKnown RBP21.3■■□□□ 1
GPC1-205ENST00000427506 TRPV6Q9H1D0 765 aa21.3■■□□□ 1
GPC1-205ENST00000427506 B4GALT4O60513 344 aa21.29■■□□□ 1
GPC1-205ENST00000427506 CHMP4BP1P59074 171 aa21.29■■□□□ 1
GPC1-205ENST00000427506 PPIGQ13427 754 aaKnown RBP eCLIP21.29■■□□□ 1
GPC1-205ENST00000427506 KRT32Q14532 448 aa21.29■■□□□ 1
GPC1-205ENST00000427506 PGM5Q15124 567 aa21.29■■□□□ 1
GPC1-205ENST00000427506 Q7L0L9 218 aa21.29■■□□□ 1
GPC1-205ENST00000427506 MICU3Q86XE3 530 aa21.29■■□□□ 1
GPC1-205ENST00000427506 SRBD1Q8N5C6 995 aaKnown RBP21.29■■□□□ 1
GPC1-205ENST00000427506 AFG1LQ8WV93 481 aa21.29■■□□□ 1
GPC1-205ENST00000427506 HIPK3Q9H422 1215 aa21.29■■□□□ 1
GPC1-205ENST00000427506 CCND2P30279 289 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms