RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 BAHCC1Q9P281 2608 aa11.06□□□□□ -0.64
LSG1-202ENST00000427461 GVINP1Q7Z2Y8 2422 aa11.06□□□□□ -0.64
LSG1-202ENST00000427461 USP17L12C9JPN9 530 aa11.05□□□□□ -0.64
LSG1-202ENST00000427461 USP17L21D6R901 530 aa11.05□□□□□ -0.64
LSG1-202ENST00000427461 F5H6K3 240 aa11.05□□□□□ -0.64
LSG1-202ENST00000427461 NDUFB10O96000 172 aa11.05□□□□□ -0.64
LSG1-202ENST00000427461 SELPP16109 830 aa11.05□□□□□ -0.64
LSG1-202ENST00000427461 HTRA4P83105 476 aaPredicted RBP11.05□□□□□ -0.64
LSG1-202ENST00000427461 KLRC3Q07444 240 aa11.05□□□□□ -0.64
LSG1-202ENST00000427461 IKBKEQ14164 716 aa11.05□□□□□ -0.64
LSG1-202ENST00000427461 GDF6Q6KF10 455 aaPredicted RBP11.05□□□□□ -0.64
LSG1-202ENST00000427461 TMEM192Q8IY95 271 aa11.05□□□□□ -0.64
LSG1-202ENST00000427461 MYOCDQ8IZQ8 938 aa11.05□□□□□ -0.64
LSG1-202ENST00000427461 LCORLQ8N3X6 602 aa11.05□□□□□ -0.64
LSG1-202ENST00000427461 OR6J1Q8NGC5 347 aa11.05□□□□□ -0.64
LSG1-202ENST00000427461 CCDC17Q96LX7 622 aa11.05□□□□□ -0.64
LSG1-202ENST00000427461 ACAD9Q9H845 621 aa11.05□□□□□ -0.64
LSG1-202ENST00000427461 NCOR2Q9Y618 2525 aa11.05□□□□□ -0.64
LSG1-202ENST00000427461 NCK2O43639 380 aa11.04□□□□□ -0.64
LSG1-202ENST00000427461 PRKAB2O43741 272 aa11.04□□□□□ -0.64
LSG1-202ENST00000427461 CKBP12277 381 aa11.04□□□□□ -0.64
LSG1-202ENST00000427461 CPT1AP50416 773 aa11.04□□□□□ -0.64
LSG1-202ENST00000427461 FBXO11Q86XK2 927 aa11.04□□□□□ -0.64
LSG1-202ENST00000427461 CAGE1Q8TC20 777 aa11.04□□□□□ -0.64
LSG1-202ENST00000427461 COPS5Q92905 334 aa11.04□□□□□ -0.64
LSG1-202ENST00000427461 SAMD11Q96NU1 681 aa11.04□□□□□ -0.64
LSG1-202ENST00000427461 WDR11Q9BZH6 1224 aa11.04□□□□□ -0.64
LSG1-202ENST00000427461 CCDC8Q9H0W5 538 aaPredicted RBP11.04□□□□□ -0.64
LSG1-202ENST00000427461 VTA1Q9NP79 307 aa11.04□□□□□ -0.64
LSG1-202ENST00000427461 GPR108Q9NPR9 543 aa11.04□□□□□ -0.64
LSG1-202ENST00000427461 RNF146Q9NTX7 359 aa11.04□□□□□ -0.64
LSG1-202ENST00000427461 GRM6O15303 877 aa11.03□□□□□ -0.64
LSG1-202ENST00000427461 LGR5O75473 907 aa11.03□□□□□ -0.64
LSG1-202ENST00000427461 RRP1P56182 461 aaKnown RBP11.03□□□□□ -0.64
LSG1-202ENST00000427461 PTPN11Q06124 597 aaPredicted RBP11.03□□□□□ -0.64
LSG1-202ENST00000427461 MBTPS1Q14703 1052 aa11.03□□□□□ -0.64
LSG1-202ENST00000427461 CBX2Q14781 532 aaPredicted RBP11.03□□□□□ -0.64
LSG1-202ENST00000427461 CCDC155Q8N6L0 562 aa11.03□□□□□ -0.64
LSG1-202ENST00000427461 TMEM105Q8N8V8 129 aa11.03□□□□□ -0.64
LSG1-202ENST00000427461 MSLNLQ96KJ4 702 aa11.03□□□□□ -0.64
LSG1-202ENST00000427461 RPGRIP1Q96KN7 1286 aa11.03□□□□□ -0.64
LSG1-202ENST00000427461 INCENPQ9NQS7 918 aa11.03□□□□□ -0.64
LSG1-202ENST00000427461 SMC4Q9NTJ3 1288 aa11.03□□□□□ -0.64
LSG1-202ENST00000427461 NOB1Q9ULX3 412 aaKnown RBP11.03□□□□□ -0.64
LSG1-202ENST00000427461 GREB1LQ9C091 1923 aaPredicted RBP11.03□□□□□ -0.64
LSG1-202ENST00000427461 RALGAPA2Q2PPJ7 1873 aa11.02□□□□□ -0.64
LSG1-202ENST00000427461 EFCAB14O75071 495 aa11.02□□□□□ -0.65
LSG1-202ENST00000427461 UPP2O95045 317 aa11.02□□□□□ -0.65
LSG1-202ENST00000427461 EYA4O95677 639 aa11.02□□□□□ -0.65
LSG1-202ENST00000427461 NDUFV1P49821 464 aa11.02□□□□□ -0.65
LSG1-202ENST00000427461 OAZ1P54368 228 aa11.02□□□□□ -0.65
LSG1-202ENST00000427461 ADAM15Q13444 863 aa11.02□□□□□ -0.65
LSG1-202ENST00000427461 SLFNL1Q499Z3 407 aa11.02□□□□□ -0.65
LSG1-202ENST00000427461 MUM1L1Q5H9M0 696 aa11.02□□□□□ -0.65
LSG1-202ENST00000427461 C12orf60Q5U649 245 aa11.02□□□□□ -0.65
LSG1-202ENST00000427461 TRAF7Q6Q0C0 670 aa11.02□□□□□ -0.65
LSG1-202ENST00000427461 C16orf86Q6ZW13 317 aa11.02□□□□□ -0.65
LSG1-202ENST00000427461 WNT8BQ93098 351 aa11.02□□□□□ -0.65
LSG1-202ENST00000427461 RIPOR3Q96MK2 946 aa11.02□□□□□ -0.65
LSG1-202ENST00000427461 YME1L1Q96TA2 773 aa11.02□□□□□ -0.65
LSG1-202ENST00000427461 ARMT1Q9H993 441 aa11.02□□□□□ -0.65
LSG1-202ENST00000427461 RALYQ9UKM9 306 aaKnown RBP11.02□□□□□ -0.65
LSG1-202ENST00000427461 ZNF292O60281 2723 aa11.02□□□□□ -0.65
LSG1-202ENST00000427461 TPRP12270 2363 aaKnown RBP11.02□□□□□ -0.65
LSG1-202ENST00000427461 MYH4Q9Y623 1939 aa11.01□□□□□ -0.65
LSG1-202ENST00000427461 AMHP03971 560 aa11.01□□□□□ -0.65
LSG1-202ENST00000427461 ALAS1P13196 640 aa11.01□□□□□ -0.65
LSG1-202ENST00000427461 PDE6AP16499 860 aa11.01□□□□□ -0.65
LSG1-202ENST00000427461 NUBP1P53384 320 aa11.01□□□□□ -0.65
LSG1-202ENST00000427461 SNAP25P60880 206 aa11.01□□□□□ -0.65
LSG1-202ENST00000427461 ZNF618Q5T7W0 954 aa11.01□□□□□ -0.65
LSG1-202ENST00000427461 SLC9C2Q5TAH2 1124 aa11.01□□□□□ -0.65
LSG1-202ENST00000427461 STK11IPQ8N1F8 1099 aa11.01□□□□□ -0.65
LSG1-202ENST00000427461 DBF4BQ8NFT6 615 aa11.01□□□□□ -0.65
LSG1-202ENST00000427461 CHMP4CQ96CF2 233 aa11.01□□□□□ -0.65
LSG1-202ENST00000427461 TRERF1Q96PN7 1200 aa11.01□□□□□ -0.65
LSG1-202ENST00000427461 CYP39A1Q9NYL5 469 aa11.01□□□□□ -0.65
LSG1-202ENST00000427461 CLEC1BQ9P126 229 aa11.01□□□□□ -0.65
LSG1-202ENST00000427461 ZNF532Q9HCE3 1301 aa11.01□□□□□ -0.65
LSG1-202ENST00000427461 A6NJR5 290 aa11□□□□□ -0.65
LSG1-202ENST00000427461 PARNO95453 639 aaKnown RBP11□□□□□ -0.65
LSG1-202ENST00000427461 GNAI3P08754 354 aa11□□□□□ -0.65
LSG1-202ENST00000427461 CTNNB1P35222 781 aa11□□□□□ -0.65
LSG1-202ENST00000427461 RBL2Q08999 1139 aa11□□□□□ -0.65
LSG1-202ENST00000427461 OS9Q13438 667 aaPredicted RBP11□□□□□ -0.65
LSG1-202ENST00000427461 PTPN21Q16825 1174 aa11□□□□□ -0.65
LSG1-202ENST00000427461 ALDH1L2Q3SY69 923 aa11□□□□□ -0.65
LSG1-202ENST00000427461 KIAA2013Q8IYS2 634 aa11□□□□□ -0.65
LSG1-202ENST00000427461 SMRP1Q8NCR6 262 aa11□□□□□ -0.65
LSG1-202ENST00000427461 MORC4Q8TE76 937 aa11□□□□□ -0.65
LSG1-202ENST00000427461 EAF2Q96CJ1 260 aaPredicted RBP11□□□□□ -0.65
LSG1-202ENST00000427461 CLIP2Q9UDT6 1046 aa11□□□□□ -0.65
LSG1-202ENST00000427461 FEM1BQ9UK73 627 aa11□□□□□ -0.65
LSG1-202ENST00000427461 USP15Q9Y4E8 981 aaPredicted RBP11□□□□□ -0.65
LSG1-202ENST00000427461 FRYLO94915 3013 aa10.99□□□□□ -0.65
LSG1-202ENST00000427461 TCRBV5S4A2TA0A5A2 114 aa10.99□□□□□ -0.65
LSG1-202ENST00000427461 RBM47A0AV96 593 aaKnown RBP10.99□□□□□ -0.65
LSG1-202ENST00000427461 ARP10275 920 aa10.99□□□□□ -0.65
LSG1-202ENST00000427461 ICAM3P32942 547 aa10.99□□□□□ -0.65
LSG1-202ENST00000427461 COL9A2Q14055 689 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms