RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 AP5M1Q9H0R1 490 aa11.15□□□□□ -0.62
HERC3-204ENST00000422770 ZSWIM6Q9HCJ5 1215 aa11.15□□□□□ -0.62
HERC3-204ENST00000422770 VTA1Q9NP79 307 aa11.15□□□□□ -0.62
HERC3-204ENST00000422770 PDGFCQ9NRA1 345 aa11.15□□□□□ -0.62
HERC3-204ENST00000422770 COL20A1Q9P218 1284 aa11.15□□□□□ -0.62
HERC3-204ENST00000422770 RBM19Q9Y4C8 960 aaKnown RBP11.15□□□□□ -0.62
HERC3-204ENST00000422770 CPLX1O14810 134 aa11.14□□□□□ -0.63
HERC3-204ENST00000422770 ADCY6O43306 1168 aa11.14□□□□□ -0.63
HERC3-204ENST00000422770 DUSP11O75319 330 aaKnown RBP11.14□□□□□ -0.63
HERC3-204ENST00000422770 SMARCA1P28370 1054 aa11.14□□□□□ -0.63
HERC3-204ENST00000422770 NAPAP54920 295 aa11.14□□□□□ -0.63
HERC3-204ENST00000422770 PPP2R5BQ15173 497 aa11.14□□□□□ -0.63
HERC3-204ENST00000422770 TLK2Q86UE8 772 aa11.14□□□□□ -0.63
HERC3-204ENST00000422770 NCOA5Q9HCD5 579 aaKnown RBP11.14□□□□□ -0.63
HERC3-204ENST00000422770 PXMP2Q9NR77 195 aa11.14□□□□□ -0.63
HERC3-204ENST00000422770 V9GY48 417 aaPredicted RBP11.14□□□□□ -0.63
HERC3-204ENST00000422770 MYADML2A6NDP7 307 aa11.13□□□□□ -0.63
HERC3-204ENST00000422770 OPLAHO14841 1288 aa11.13□□□□□ -0.63
HERC3-204ENST00000422770 DYNC1LI2O43237 492 aaPredicted RBP11.13□□□□□ -0.63
HERC3-204ENST00000422770 SMPD1P17405 629 aa11.13□□□□□ -0.63
HERC3-204ENST00000422770 PTGS1P23219 599 aa11.13□□□□□ -0.63
HERC3-204ENST00000422770 CCND2P30279 289 aa11.13□□□□□ -0.63
HERC3-204ENST00000422770 ADD1P35611 737 aaKnown RBP11.13□□□□□ -0.63
HERC3-204ENST00000422770 MNX1P50219 401 aaPredicted RBP11.13□□□□□ -0.63
HERC3-204ENST00000422770 HSD17B4P51659 736 aa11.13□□□□□ -0.63
HERC3-204ENST00000422770 IRX5P78411 483 aaPredicted RBP11.13□□□□□ -0.63
HERC3-204ENST00000422770 BEX3Q00994 111 aa11.13□□□□□ -0.63
HERC3-204ENST00000422770 TOB2Q14106 344 aaPredicted RBP11.13□□□□□ -0.63
HERC3-204ENST00000422770 STXBP2Q15833 593 aa11.13□□□□□ -0.63
HERC3-204ENST00000422770 UBE2SQ16763 222 aa11.13□□□□□ -0.63
HERC3-204ENST00000422770 GNASQ5JWF2 1037 aa11.13□□□□□ -0.63
HERC3-204ENST00000422770 UBE2Q1Q7Z7E8 422 aa11.13□□□□□ -0.63
HERC3-204ENST00000422770 ZFP91Q96JP5 570 aaPredicted RBP11.13□□□□□ -0.63
HERC3-204ENST00000422770 KIF2CQ99661 725 aa11.13□□□□□ -0.63
HERC3-204ENST00000422770 SLC26A6Q9BXS9 759 aa11.13□□□□□ -0.63
HERC3-204ENST00000422770 WDR11Q9BZH6 1224 aa11.13□□□□□ -0.63
HERC3-204ENST00000422770 TM6SF1Q9BZW5 370 aa11.13□□□□□ -0.63
HERC3-204ENST00000422770 KATNBL1Q9H079 304 aa11.13□□□□□ -0.63
HERC3-204ENST00000422770 PSTPIP2Q9H939 334 aa11.13□□□□□ -0.63
HERC3-204ENST00000422770 ATP11BQ9Y2G3 1177 aa11.13□□□□□ -0.63
HERC3-204ENST00000422770 NR2E3Q9Y5X4 410 aa11.13□□□□□ -0.63
HERC3-204ENST00000422770 BRCA2P51587 3418 aa11.13□□□□□ -0.63
HERC3-204ENST00000422770 LOC102724159A0A0B4J2E5 919 aa11.12□□□□□ -0.63
HERC3-204ENST00000422770 SORBS3O60504 671 aa11.12□□□□□ -0.63
HERC3-204ENST00000422770 NR3C2P08235 984 aa11.12□□□□□ -0.63
HERC3-204ENST00000422770 TXNP10599 105 aaKnown RBP11.12□□□□□ -0.63
HERC3-204ENST00000422770 SYN1P17600 705 aa11.12□□□□□ -0.63
HERC3-204ENST00000422770 PDIA3P30101 505 aaKnown RBP11.12□□□□□ -0.63
HERC3-204ENST00000422770 RCAN1P53805 252 aa11.12□□□□□ -0.63
HERC3-204ENST00000422770 CHMP4BP1P59074 171 aa11.12□□□□□ -0.63
HERC3-204ENST00000422770 TTLL4Q14679 1199 aa11.12□□□□□ -0.63
HERC3-204ENST00000422770 PGM5Q15124 567 aa11.12□□□□□ -0.63
HERC3-204ENST00000422770 PWP2Q15269 919 aaKnown RBP11.12□□□□□ -0.63
HERC3-204ENST00000422770 LRRC26Q2I0M4 334 aa11.12□□□□□ -0.63
HERC3-204ENST00000422770 WWC2Q6AWC2 1192 aa11.12□□□□□ -0.63
HERC3-204ENST00000422770 IQSEC1Q6DN90 963 aa11.12□□□□□ -0.63
HERC3-204ENST00000422770 TAPT1Q6NXT6 567 aa11.12□□□□□ -0.63
HERC3-204ENST00000422770 USP17L6PQ6QN14 398 aa11.12□□□□□ -0.63
HERC3-204ENST00000422770 HSCBQ8IWL3 235 aa11.12□□□□□ -0.63
HERC3-204ENST00000422770 PCSK9Q8NBP7 692 aaKnown RBP11.12□□□□□ -0.63
HERC3-204ENST00000422770 OR6J1Q8NGC5 347 aa11.12□□□□□ -0.63
HERC3-204ENST00000422770 SCFD2Q8WU76 684 aa11.12□□□□□ -0.63
HERC3-204ENST00000422770 PHKBQ93100 1093 aa11.12□□□□□ -0.63
HERC3-204ENST00000422770 IWS1Q96ST2 819 aa11.12□□□□□ -0.63
HERC3-204ENST00000422770 MAP3K20Q9NYL2 800 aaKnown RBP11.12□□□□□ -0.63
HERC3-204ENST00000422770 ZMYND8Q9ULU4 1186 aaPredicted RBP11.12□□□□□ -0.63
HERC3-204ENST00000422770 A0A1W2PQ45 241 aaPredicted RBP11.11□□□□□ -0.63
HERC3-204ENST00000422770 A0A1W2PQY0 241 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 SPDYE3A6NKU9 549 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 H0YGN5 161 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 ST18O60284 1047 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 ZEB2O60315 1214 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 ADAMTS4O75173 837 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 MYL3P08590 195 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 ADCY7P51828 1080 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 NEK4P51957 841 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 ACLYP53396 1101 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 RTP1P59025 263 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 KCNA10Q16322 511 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 FSCN1Q16658 493 aaKnown RBP11.11□□□□□ -0.63
HERC3-204ENST00000422770 TMEM63BQ5T3F8 832 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 CPLX2Q6PUV4 134 aaKnown RBP11.11□□□□□ -0.63
HERC3-204ENST00000422770 TRIM22Q8IYM9 498 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 SAMD3Q8N6K7 520 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 IL31RAQ8NI17 732 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 MORC4Q8TE76 937 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 COPS5Q92905 334 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 PDCD2LQ9BRP1 358 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 MAF1Q9H063 256 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 SLKQ9H2G2 1235 aaPredicted RBP11.11□□□□□ -0.63
HERC3-204ENST00000422770 EHMT1Q9H9B1 1298 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 PRDM5Q9NQX1 630 aaPredicted RBP11.11□□□□□ -0.63
HERC3-204ENST00000422770 STARD7Q9NQZ5 370 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 FAM217BQ9NTX9 383 aaPredicted RBP11.11□□□□□ -0.63
HERC3-204ENST00000422770 PRKAG2Q9UGJ0 569 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 MRVI1Q9Y6F6 885 aa11.11□□□□□ -0.63
HERC3-204ENST00000422770 ASGR1P07306 291 aa11.1□□□□□ -0.63
HERC3-204ENST00000422770 COL6A1P12109 1028 aa11.1□□□□□ -0.63
HERC3-204ENST00000422770 SCG2P13521 617 aa11.1□□□□□ -0.63
HERC3-204ENST00000422770 EDNRBP24530 442 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms