RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 SREBF1P36956 1147 aa10.2□□□□□ -0.78
HPS4-204ENST00000422379 GRM1Q13255 1194 aa10.2□□□□□ -0.78
HPS4-204ENST00000422379 PTGDRQ13258 359 aa10.2□□□□□ -0.78
HPS4-204ENST00000422379 BAATQ14032 418 aaPredicted RBP10.2□□□□□ -0.78
HPS4-204ENST00000422379 ATL3Q6DD88 541 aa10.2□□□□□ -0.78
HPS4-204ENST00000422379 RIOX2Q8IUF8 465 aa10.2□□□□□ -0.78
HPS4-204ENST00000422379 LENG9Q96B70 501 aa10.2□□□□□ -0.78
HPS4-204ENST00000422379 TAAR1Q96RJ0 339 aa10.2□□□□□ -0.78
HPS4-204ENST00000422379 UIMC1Q96RL1 719 aa10.2□□□□□ -0.78
HPS4-204ENST00000422379 GOLPH3LQ9H4A5 285 aa10.2□□□□□ -0.78
HPS4-204ENST00000422379 SLC45A1Q9Y2W3 748 aa10.2□□□□□ -0.78
HPS4-204ENST00000422379 MYH7BA7E2Y1 1941 aa10.2□□□□□ -0.78
HPS4-204ENST00000422379 LCTP09848 1927 aa10.2□□□□□ -0.78
HPS4-204ENST00000422379 FAM86B1E9PN63 330 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 FAM86B2P0C5J1 330 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 LIG1P18858 919 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 ERCC3P19447 782 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 OSBPP22059 807 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 TRAPPC10P48553 1259 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 ERVK-9P63128 1117 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 ERVK-24P63145 666 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 ARHGAP4P98171 946 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 AP3B2Q13367 1082 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 STK38Q15208 465 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 SPECC1Q5M775 1068 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 NSMFQ6X4W1 530 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 USP49Q70CQ1 688 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 NEK8Q86SG6 692 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 POTEDQ86YR6 584 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 ANKRD13CQ8N6S4 541 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 MB21D1Q8N884 522 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 HHIPL1Q96JK4 782 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 CYP39A1Q9NYL5 469 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 RABGAP1Q9Y3P9 1069 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 CTDP1Q9Y5B0 961 aaPredicted RBP10.19□□□□□ -0.78
HPS4-204ENST00000422379 RPTORQ8N122 1335 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 CCNT1O60563 726 aaKnown RBP10.19□□□□□ -0.78
HPS4-204ENST00000422379 ATP2C1P98194 919 aaPredicted RBP10.19□□□□□ -0.78
HPS4-204ENST00000422379 CNTN2Q02246 1040 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 PABPC4Q13310 644 aaKnown RBP eCLIP10.19□□□□□ -0.78
HPS4-204ENST00000422379 SHC4Q6S5L8 630 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 IFNL1Q8IU54 200 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 TSPY26PQ9H489 355 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 EFCC1Q9HA90 598 aa10.19□□□□□ -0.78
HPS4-204ENST00000422379 NOL7Q9UMY1 257 aaKnown RBP10.19□□□□□ -0.78
HPS4-204ENST00000422379 RBBP6Q7Z6E9 1792 aaKnown RBP10.19□□□□□ -0.78
HPS4-204ENST00000422379 FRMPD4Q14CM0 1322 aa10.18□□□□□ -0.78
HPS4-204ENST00000422379 IGLV3-22A0A075B6J6 115 aa10.18□□□□□ -0.78
HPS4-204ENST00000422379 MANSC4A6NHS7 340 aaPredicted RBP10.18□□□□□ -0.78
HPS4-204ENST00000422379 RASSF10A6NK89 507 aa10.18□□□□□ -0.78
HPS4-204ENST00000422379 PTPREP23469 700 aa10.18□□□□□ -0.78
HPS4-204ENST00000422379 ME1P48163 572 aa10.18□□□□□ -0.78
HPS4-204ENST00000422379 APLP1P51693 650 aa10.18□□□□□ -0.78
HPS4-204ENST00000422379 MRPS9P82933 396 aaKnown RBP10.18□□□□□ -0.78
HPS4-204ENST00000422379 RNF207Q6ZRF8 634 aa10.18□□□□□ -0.78
HPS4-204ENST00000422379 NCAPG2Q86XI2 1143 aa10.18□□□□□ -0.78
HPS4-204ENST00000422379 KCNG4Q8TDN1 519 aa10.18□□□□□ -0.78
HPS4-204ENST00000422379 SMCR8Q8TEV9 937 aaPredicted RBP10.18□□□□□ -0.78
HPS4-204ENST00000422379 BBXQ8WY36 941 aaPredicted RBP10.18□□□□□ -0.78
HPS4-204ENST00000422379 HAS1Q92839 578 aa10.18□□□□□ -0.78
HPS4-204ENST00000422379 FGD4Q96M96 766 aa10.18□□□□□ -0.78
HPS4-204ENST00000422379 MBOAT7Q96N66 472 aa10.18□□□□□ -0.78
HPS4-204ENST00000422379 MTMR9Q96QG7 549 aa10.18□□□□□ -0.78
HPS4-204ENST00000422379 GLT8D2Q9H1C3 349 aa10.18□□□□□ -0.78
HPS4-204ENST00000422379 ACAD9Q9H845 621 aa10.18□□□□□ -0.78
HPS4-204ENST00000422379 CREBZFQ9NS37 354 aa10.18□□□□□ -0.78
HPS4-204ENST00000422379 CYP3A7-CYP3A51PA0A087WV96 503 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 GOLGA6L4A6NEF3 574 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 SPDYE3A6NKU9 549 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 PPP6R2O75170 966 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 LETM1O95202 739 aaPredicted RBP10.17□□□□□ -0.78
HPS4-204ENST00000422379 CYP3A7P24462 503 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 TRAF1Q13077 416 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 CCDC102AQ96A19 550 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 MORF4L1Q9UBU8 362 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 CPA4Q9UI42 421 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 PNMA3Q9UL41 463 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 SOWAHBA6NEL2 793 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 PP2D1A8MPX8 630 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 NEMFO60524 1076 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 FOSP01100 380 aaPredicted RBP10.17□□□□□ -0.78
HPS4-204ENST00000422379 PGK2P07205 417 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 ITGB5P18084 799 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 EIF2AK2P19525 551 aaKnown RBP10.17□□□□□ -0.78
HPS4-204ENST00000422379 TM4SF4P48230 202 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 CAP1Q01518 475 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 TKFCQ3LXA3 575 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 PPP4R3AQ6IN85 833 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 PAXIP1Q6ZW49 1069 aaPredicted RBP10.17□□□□□ -0.78
HPS4-204ENST00000422379 MCF2L2Q86YR7 1114 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 RNF214Q8ND24 703 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 CHST13Q8NET6 341 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 CAPNS2Q96L46 248 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 CSRNP2Q9H175 543 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 PXMP2Q9NR77 195 aa10.17□□□□□ -0.78
HPS4-204ENST00000422379 SRPRBQ9Y5M8 271 aaKnown RBP10.17□□□□□ -0.78
HPS4-204ENST00000422379 MORC2Q9Y6X9 1032 aaPredicted RBP10.17□□□□□ -0.78
HPS4-204ENST00000422379 A0A087X0B3 334 aa10.16□□□□□ -0.78
HPS4-204ENST00000422379 A0A1B0GVL5 298 aa10.16□□□□□ -0.78
HPS4-204ENST00000422379 NR1I2O75469 434 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms