RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 ZAP70P43403 619 aa6.81□□□□□ -1.32
HDAC8-212ENST00000421523 NKX3-2P78367 333 aa6.81□□□□□ -1.32
HDAC8-212ENST00000421523 SNRNP48Q6IEG0 339 aaKnown RBP6.81□□□□□ -1.32
HDAC8-212ENST00000421523 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.81□□□□□ -1.32
HDAC8-212ENST00000421523 FBXO11Q86XK2 927 aa6.81□□□□□ -1.32
HDAC8-212ENST00000421523 TMEM192Q8IY95 271 aa6.81□□□□□ -1.32
HDAC8-212ENST00000421523 MYOCDQ8IZQ8 938 aa6.81□□□□□ -1.32
HDAC8-212ENST00000421523 SMRP1Q8NCR6 262 aa6.81□□□□□ -1.32
HDAC8-212ENST00000421523 KREMEN2Q8NCW0 462 aa6.81□□□□□ -1.32
HDAC8-212ENST00000421523 FLCNQ8NFG4 579 aa6.81□□□□□ -1.32
HDAC8-212ENST00000421523 RUBCNQ92622 972 aa6.81□□□□□ -1.32
HDAC8-212ENST00000421523 MSLNLQ96KJ4 702 aa6.81□□□□□ -1.32
HDAC8-212ENST00000421523 FGD4Q96M96 766 aa6.81□□□□□ -1.32
HDAC8-212ENST00000421523 HAUS7Q99871 368 aa6.81□□□□□ -1.32
HDAC8-212ENST00000421523 PHF7Q9BWX1 381 aaPredicted RBP6.81□□□□□ -1.32
HDAC8-212ENST00000421523 KATNBL1Q9H079 304 aa6.81□□□□□ -1.32
HDAC8-212ENST00000421523 PIH1D3Q9NQM4 214 aaKnown RBP6.81□□□□□ -1.32
HDAC8-212ENST00000421523 SNRKQ9NRH2 765 aa6.81□□□□□ -1.32
HDAC8-212ENST00000421523 TLR7Q9NYK1 1049 aaKnown RBP6.81□□□□□ -1.32
HDAC8-212ENST00000421523 LRP2BPQ9P2M1 347 aa6.81□□□□□ -1.32
HDAC8-212ENST00000421523 SERPINB13Q9UIV8 391 aa6.81□□□□□ -1.32
HDAC8-212ENST00000421523 ZNF214Q9UL59 606 aaPredicted RBP6.81□□□□□ -1.32
HDAC8-212ENST00000421523 BARX2Q9UMQ3 279 aaPredicted RBP6.81□□□□□ -1.32
HDAC8-212ENST00000421523 GNEQ9Y223 722 aaKnown RBP6.81□□□□□ -1.32
HDAC8-212ENST00000421523 TRIP12Q14669 1992 aaPredicted RBP6.8□□□□□ -1.32
HDAC8-212ENST00000421523 DNAJC25-GNG10A0A024R161 153 aa6.8□□□□□ -1.32
HDAC8-212ENST00000421523 SOBPA7XYQ1 873 aa6.8□□□□□ -1.32
HDAC8-212ENST00000421523 VWA5AO00534 786 aa6.8□□□□□ -1.32
HDAC8-212ENST00000421523 RAD21O60216 631 aa6.8□□□□□ -1.32
HDAC8-212ENST00000421523 SURF6O75683 361 aaKnown RBP6.8□□□□□ -1.32
HDAC8-212ENST00000421523 ARP10275 920 aa6.8□□□□□ -1.32
HDAC8-212ENST00000421523 PLCG2P16885 1265 aa6.8□□□□□ -1.32
HDAC8-212ENST00000421523 SMPD1P17405 629 aa6.8□□□□□ -1.32
HDAC8-212ENST00000421523 SHMT1P34896 483 aa6.8□□□□□ -1.32
HDAC8-212ENST00000421523 CTNNB1P35222 781 aa6.8□□□□□ -1.32
HDAC8-212ENST00000421523 COPB2P35606 906 aa6.8□□□□□ -1.32
HDAC8-212ENST00000421523 GPNMBQ14956 572 aa6.8□□□□□ -1.32
HDAC8-212ENST00000421523 CCDC158Q5M9N0 1113 aa6.8□□□□□ -1.32
HDAC8-212ENST00000421523 GORABQ5T7V8 394 aa6.8□□□□□ -1.32
HDAC8-212ENST00000421523 NAA16Q6N069 864 aaPredicted RBP6.8□□□□□ -1.32
HDAC8-212ENST00000421523 CEP85Q6P2H3 762 aa6.8□□□□□ -1.32
HDAC8-212ENST00000421523 EEPD1Q7L9B9 569 aa6.8□□□□□ -1.32
HDAC8-212ENST00000421523 ZNF467Q7Z7K2 595 aaPredicted RBP6.8□□□□□ -1.32
HDAC8-212ENST00000421523 MIER1Q8N108 512 aa6.8□□□□□ -1.32
HDAC8-212ENST00000421523 SAMD11Q96NU1 681 aa6.8□□□□□ -1.32
HDAC8-212ENST00000421523 YME1L1Q96TA2 773 aa6.8□□□□□ -1.32
HDAC8-212ENST00000421523 C1orf115Q9H7X2 142 aa6.8□□□□□ -1.32
HDAC8-212ENST00000421523 TSHZ2Q9NRE2 1034 aa6.8□□□□□ -1.32
HDAC8-212ENST00000421523 CLEC1BQ9P126 229 aa6.8□□□□□ -1.32
HDAC8-212ENST00000421523 CDV3Q9UKY7 258 aaKnown RBP6.8□□□□□ -1.32
HDAC8-212ENST00000421523 RIPK3Q9Y572 518 aa6.8□□□□□ -1.32
HDAC8-212ENST00000421523 HELZ2Q9BYK8 2649 aaKnown RBP6.8□□□□□ -1.32
HDAC8-212ENST00000421523 IGF2RP11717 2491 aa6.79□□□□□ -1.32
HDAC8-212ENST00000421523 MICAL3Q7RTP6 2002 aa6.79□□□□□ -1.32
HDAC8-212ENST00000421523 RALGAPA2Q2PPJ7 1873 aa6.79□□□□□ -1.32
HDAC8-212ENST00000421523 ABHD14A-ACY1A0A1B0GW23 586 aa6.79□□□□□ -1.32
HDAC8-212ENST00000421523 GRM6O15303 877 aa6.79□□□□□ -1.32
HDAC8-212ENST00000421523 NBNO60934 754 aa6.79□□□□□ -1.32
HDAC8-212ENST00000421523 UPP2O95045 317 aa6.79□□□□□ -1.32
HDAC8-212ENST00000421523 BRD1O95696 1058 aa6.79□□□□□ -1.32
HDAC8-212ENST00000421523 DYNLL1P63167 89 aaKnown RBP6.79□□□□□ -1.32
HDAC8-212ENST00000421523 ADAM15Q13444 863 aa6.79□□□□□ -1.32
HDAC8-212ENST00000421523 MTMR3Q13615 1198 aa6.79□□□□□ -1.32
HDAC8-212ENST00000421523 IKBKEQ14164 716 aa6.79□□□□□ -1.32
HDAC8-212ENST00000421523 LRRFIP1Q32MZ4 808 aaKnown RBP6.79□□□□□ -1.32
HDAC8-212ENST00000421523 TTC39AQ5SRH9 613 aa6.79□□□□□ -1.32
HDAC8-212ENST00000421523 LRRC8DQ7L1W4 858 aa6.79□□□□□ -1.32
HDAC8-212ENST00000421523 FBXO16Q8IX29 292 aaPredicted RBP6.79□□□□□ -1.32
HDAC8-212ENST00000421523 SIRT2Q8IXJ6 389 aa6.79□□□□□ -1.32
HDAC8-212ENST00000421523 CRIPAKQ8N1N5 446 aa6.79□□□□□ -1.32
HDAC8-212ENST00000421523 ANKRD35Q8N283 1001 aa6.79□□□□□ -1.32
HDAC8-212ENST00000421523 MAGEB6Q8N7X4 407 aa6.79□□□□□ -1.32
HDAC8-212ENST00000421523 FAM133AQ8N9E0 248 aa6.79□□□□□ -1.32
HDAC8-212ENST00000421523 AFAP1L1Q8TED9 768 aa6.79□□□□□ -1.32
HDAC8-212ENST00000421523 RIOK1Q9BRS2 568 aaKnown RBP6.79□□□□□ -1.32
HDAC8-212ENST00000421523 TEX13BQ9BXU2 312 aa6.79□□□□□ -1.32
HDAC8-212ENST00000421523 CCDC8Q9H0W5 538 aaPredicted RBP6.79□□□□□ -1.32
HDAC8-212ENST00000421523 ANTXR1Q9H6X2 564 aa6.79□□□□□ -1.32
HDAC8-212ENST00000421523 PDGFCQ9NRA1 345 aa6.79□□□□□ -1.32
HDAC8-212ENST00000421523 DMXL2Q8TDJ6 3036 aa6.78□□□□□ -1.32
HDAC8-212ENST00000421523 WDR46O15213 610 aaKnown RBP6.78□□□□□ -1.32
HDAC8-212ENST00000421523 PI15O43692 258 aa6.78□□□□□ -1.32
HDAC8-212ENST00000421523 AMHP03971 560 aa6.78□□□□□ -1.32
HDAC8-212ENST00000421523 SELPP16109 830 aa6.78□□□□□ -1.32
HDAC8-212ENST00000421523 USP5P45974 858 aa6.78□□□□□ -1.32
HDAC8-212ENST00000421523 CLCN5P51795 746 aa6.78□□□□□ -1.32
HDAC8-212ENST00000421523 HTRA4P83105 476 aaPredicted RBP6.78□□□□□ -1.32
HDAC8-212ENST00000421523 PURAQ00577 322 aaKnown RBP6.78□□□□□ -1.32
HDAC8-212ENST00000421523 CNTN2Q02246 1040 aa6.78□□□□□ -1.32
HDAC8-212ENST00000421523 GABPAQ06546 454 aa6.78□□□□□ -1.32
HDAC8-212ENST00000421523 PTGISQ16647 500 aa6.78□□□□□ -1.32
HDAC8-212ENST00000421523 CWF19L1Q69YN2 538 aaKnown RBP6.78□□□□□ -1.32
HDAC8-212ENST00000421523 TMED8Q6PL24 325 aaPredicted RBP6.78□□□□□ -1.32
HDAC8-212ENST00000421523 ADGRD2Q7Z7M1 963 aa6.78□□□□□ -1.32
HDAC8-212ENST00000421523 CCDC105Q8IYK2 499 aa6.78□□□□□ -1.32
HDAC8-212ENST00000421523 CPXCR1Q8N123 301 aa6.78□□□□□ -1.32
HDAC8-212ENST00000421523 CCDC155Q8N6L0 562 aa6.78□□□□□ -1.32
HDAC8-212ENST00000421523 REPS2Q8NFH8 660 aa6.78□□□□□ -1.32
HDAC8-212ENST00000421523 RIN2Q8WYP3 895 aaPredicted RBP6.78□□□□□ -1.32
HDAC8-212ENST00000421523 MTG1Q9BT17 334 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms