RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 SUPT20HL2P0C7V6 817 aa20.27■□□□□ 0.84
MSH6-203ENST00000420813 TTLL4Q14679 1199 aa20.27■□□□□ 0.84
MSH6-203ENST00000420813 QRICH1Q2TAL8 776 aa20.27■□□□□ 0.84
MSH6-203ENST00000420813 TTC22Q5TAA0 569 aa20.27■□□□□ 0.84
MSH6-203ENST00000420813 MCF2L2Q86YR7 1114 aa20.27■□□□□ 0.84
MSH6-203ENST00000420813 WNT8AQ9H1J5 351 aa20.27■□□□□ 0.84
MSH6-203ENST00000420813 IL25Q9H293 177 aa20.27■□□□□ 0.84
MSH6-203ENST00000420813 SCN5AQ14524 2016 aa20.27■□□□□ 0.84
MSH6-203ENST00000420813 MYH7BA7E2Y1 1941 aa20.27■□□□□ 0.84
MSH6-203ENST00000420813 FGBP02675 491 aa20.26■□□□□ 0.83
MSH6-203ENST00000420813 MYL3P08590 195 aa20.26■□□□□ 0.83
MSH6-203ENST00000420813 TXNP10599 105 aaKnown RBP20.26■□□□□ 0.83
MSH6-203ENST00000420813 GSPT1P15170 499 aaKnown RBP20.26■□□□□ 0.83
MSH6-203ENST00000420813 PDE4AP27815 886 aa20.26■□□□□ 0.83
MSH6-203ENST00000420813 IFIT1BQ5T764 474 aaKnown RBP20.26■□□□□ 0.83
MSH6-203ENST00000420813 FBXO11Q86XK2 927 aa20.26■□□□□ 0.83
MSH6-203ENST00000420813 RPUSD2Q8IZ73 545 aaKnown RBP20.26■□□□□ 0.83
MSH6-203ENST00000420813 SYTL5Q8TDW5 730 aaPredicted RBP20.26■□□□□ 0.83
MSH6-203ENST00000420813 NSUN6Q8TEA1 469 aaKnown RBP20.26■□□□□ 0.83
MSH6-203ENST00000420813 PBX4Q9BYU1 374 aa20.26■□□□□ 0.83
MSH6-203ENST00000420813 ZNF576Q9H609 170 aa20.26■□□□□ 0.83
MSH6-203ENST00000420813 JMJD4Q9H9V9 463 aa20.26■□□□□ 0.83
MSH6-203ENST00000420813 MRPL11Q9Y3B7 192 aaKnown RBP20.26■□□□□ 0.83
MSH6-203ENST00000420813 TRIP12Q14669 1992 aaPredicted RBP20.25■□□□□ 0.83
MSH6-203ENST00000420813 DHX16O60231 1041 aaKnown RBP20.25■□□□□ 0.83
MSH6-203ENST00000420813 CCL23P55773 120 aa20.25■□□□□ 0.83
MSH6-203ENST00000420813 GRIN2CQ14957 1233 aa20.25■□□□□ 0.83
MSH6-203ENST00000420813 SEC23AQ15436 765 aa20.25■□□□□ 0.83
MSH6-203ENST00000420813 NFRKBQ6P4R8 1299 aa20.25■□□□□ 0.83
MSH6-203ENST00000420813 RUFY2Q8WXA3 655 aa20.25■□□□□ 0.83
MSH6-203ENST00000420813 IWS1Q96ST2 819 aa20.25■□□□□ 0.83
MSH6-203ENST00000420813 SUPT16HQ9Y5B9 1047 aaKnown RBP20.25■□□□□ 0.83
MSH6-203ENST00000420813 BAZ2BQ9UIF8 2168 aaKnown RBP20.25■□□□□ 0.83
MSH6-203ENST00000420813 PFKMP08237 780 aa20.24■□□□□ 0.83
MSH6-203ENST00000420813 PTPN11Q06124 597 aaPredicted RBP20.24■□□□□ 0.83
MSH6-203ENST00000420813 RAB30Q15771 203 aa20.24■□□□□ 0.83
MSH6-203ENST00000420813 CCDC62Q6P9F0 684 aa20.24■□□□□ 0.83
MSH6-203ENST00000420813 TBC1D5Q92609 795 aa20.24■□□□□ 0.83
MSH6-203ENST00000420813 COPS5Q92905 334 aa20.24■□□□□ 0.83
MSH6-203ENST00000420813 TAAR1Q96RJ0 339 aa20.24■□□□□ 0.83
MSH6-203ENST00000420813 TRMT13Q9NUP7 481 aaKnown RBP20.24■□□□□ 0.83
MSH6-203ENST00000420813 COL20A1Q9P218 1284 aa20.24■□□□□ 0.83
MSH6-203ENST00000420813 GRXCR1A8MXD5 290 aa20.23■□□□□ 0.83
MSH6-203ENST00000420813 ARIH2O95376 493 aa20.23■□□□□ 0.83
MSH6-203ENST00000420813 PBX2P40425 430 aa20.23■□□□□ 0.83
MSH6-203ENST00000420813 GHRHRQ02643 423 aa20.23■□□□□ 0.83
MSH6-203ENST00000420813 TRDNQ13061 729 aa20.23■□□□□ 0.83
MSH6-203ENST00000420813 NBPF20Q3BBV1 942 aa20.23■□□□□ 0.83
MSH6-203ENST00000420813 RMDN3Q96TC7 470 aa20.23■□□□□ 0.83
MSH6-203ENST00000420813 AMNQ9BXJ7 453 aa20.23■□□□□ 0.83
MSH6-203ENST00000420813 VAT1LQ9HCJ6 419 aa20.23■□□□□ 0.83
MSH6-203ENST00000420813 CXXC1Q9P0U4 656 aaPredicted RBP20.23■□□□□ 0.83
MSH6-203ENST00000420813 CHD9Q3L8U1 2897 aa20.23■□□□□ 0.83
MSH6-203ENST00000420813 KLRF2D3W0D1 207 aa20.22■□□□□ 0.83
MSH6-203ENST00000420813 STXBP2Q15833 593 aa20.22■□□□□ 0.83
MSH6-203ENST00000420813 CYB5R4Q7L1T6 521 aa20.22■□□□□ 0.83
MSH6-203ENST00000420813 OTOP2Q7RTS6 562 aa20.22■□□□□ 0.83
MSH6-203ENST00000420813 STAG2Q8N3U4 1231 aa20.22■□□□□ 0.83
MSH6-203ENST00000420813 MTMR8Q96EF0 704 aa20.22■□□□□ 0.83
MSH6-203ENST00000420813 MAP3K20Q9NYL2 800 aaKnown RBP20.22■□□□□ 0.83
MSH6-203ENST00000420813 MSRAQ9UJ68 235 aa20.22■□□□□ 0.83
MSH6-203ENST00000420813 U3KPZ7 1027 aaPredicted RBP20.22■□□□□ 0.83
MSH6-203ENST00000420813 PALM3A6NDB9 673 aaPredicted RBP20.21■□□□□ 0.83
MSH6-203ENST00000420813 GH1P01241 217 aa20.21■□□□□ 0.83
MSH6-203ENST00000420813 CYP21A2P08686 494 aa20.21■□□□□ 0.83
MSH6-203ENST00000420813 CYP2C9P11712 490 aa20.21■□□□□ 0.83
MSH6-203ENST00000420813 CHMLP26374 656 aa20.21■□□□□ 0.83
MSH6-203ENST00000420813 HSD17B4P51659 736 aa20.21■□□□□ 0.83
MSH6-203ENST00000420813 FAM47CQ5HY64 1035 aa20.21■□□□□ 0.83
MSH6-203ENST00000420813 SAMD3Q8N6K7 520 aa20.21■□□□□ 0.83
MSH6-203ENST00000420813 VWCEQ96DN2 955 aa20.21■□□□□ 0.83
MSH6-203ENST00000420813 SCLYQ96I15 445 aa20.21■□□□□ 0.83
MSH6-203ENST00000420813 COL25A1Q9BXS0 654 aaPredicted RBP20.21■□□□□ 0.83
MSH6-203ENST00000420813 MAD2L2Q9UI95 211 aa20.21■□□□□ 0.83
MSH6-203ENST00000420813 TET1Q8NFU7 2136 aa20.2■□□□□ 0.82
MSH6-203ENST00000420813 PITPNM1O00562 1244 aa20.2■□□□□ 0.82
MSH6-203ENST00000420813 EIF3JO75822 258 aaKnown RBP20.2■□□□□ 0.82
MSH6-203ENST00000420813 RFC2P35250 354 aa20.2■□□□□ 0.82
MSH6-203ENST00000420813 ARHGAP1Q07960 439 aa20.2■□□□□ 0.82
MSH6-203ENST00000420813 ARHGEF16Q5VV41 709 aa20.2■□□□□ 0.82
MSH6-203ENST00000420813 SEPT14Q6ZU15 432 aa20.2■□□□□ 0.82
MSH6-203ENST00000420813 PXMP2Q9NR77 195 aa20.2■□□□□ 0.82
MSH6-203ENST00000420813 OPLAHO14841 1288 aa20.19■□□□□ 0.82
MSH6-203ENST00000420813 ZBTB5O15062 677 aa20.19■□□□□ 0.82
MSH6-203ENST00000420813 CFBP00751 764 aa20.19■□□□□ 0.82
MSH6-203ENST00000420813 MMP3P08254 477 aa20.19■□□□□ 0.82
MSH6-203ENST00000420813 EIF2AK2P19525 551 aaKnown RBP20.19■□□□□ 0.82
MSH6-203ENST00000420813 TRAF1Q13077 416 aa20.19■□□□□ 0.82
MSH6-203ENST00000420813 LY6KQ17RY6 165 aa20.19■□□□□ 0.82
MSH6-203ENST00000420813 AFG1LQ8WV93 481 aa20.19■□□□□ 0.82
MSH6-203ENST00000420813 GAS2L1Q99501 681 aaPredicted RBP20.19■□□□□ 0.82
MSH6-203ENST00000420813 SLC4A7Q9Y6M7 1214 aa20.19■□□□□ 0.82
MSH6-203ENST00000420813 ERICH2A1L162 156 aa20.18■□□□□ 0.82
MSH6-203ENST00000420813 NR3C2P08235 984 aa20.18■□□□□ 0.82
MSH6-203ENST00000420813 PTH1RQ03431 593 aa20.18■□□□□ 0.82
MSH6-203ENST00000420813 GRM4Q14833 912 aa20.18■□□□□ 0.82
MSH6-203ENST00000420813 SESTD1Q86VW0 696 aa20.18■□□□□ 0.82
MSH6-203ENST00000420813 EMID1Q96A84 441 aaPredicted RBP20.18■□□□□ 0.82
MSH6-203ENST00000420813 DDX41Q9UJV9 622 aaKnown RBP20.18■□□□□ 0.82
MSH6-203ENST00000420813 PCDHA1Q9Y5I3 950 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms