RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 ATP11BQ9Y2G3 1177 aa21.02■□□□□ 0.96
ECHDC3-202ENST00000420401 SMCHD1A6NHR9 2005 aa21.02■□□□□ 0.96
ECHDC3-202ENST00000420401 DNM1LO00429 736 aa21.01■□□□□ 0.95
ECHDC3-202ENST00000420401 SEC24BO95487 1268 aa21.01■□□□□ 0.95
ECHDC3-202ENST00000420401 EVCP57679 992 aa21.01■□□□□ 0.95
ECHDC3-202ENST00000420401 GHRHRQ02643 423 aa21.01■□□□□ 0.95
ECHDC3-202ENST00000420401 PDE4DQ08499 809 aa21.01■□□□□ 0.95
ECHDC3-202ENST00000420401 ANO1Q5XXA6 986 aa21.01■□□□□ 0.95
ECHDC3-202ENST00000420401 NSUN6Q8TEA1 469 aaKnown RBP21.01■□□□□ 0.95
ECHDC3-202ENST00000420401 KATNBL1Q9H079 304 aa21.01■□□□□ 0.95
ECHDC3-202ENST00000420401 VTA1Q9NP79 307 aa21.01■□□□□ 0.95
ECHDC3-202ENST00000420401 GCOM1H8Y6P7 765 aaPredicted RBP21■□□□□ 0.95
ECHDC3-202ENST00000420401 OPLAHO14841 1288 aa21■□□□□ 0.95
ECHDC3-202ENST00000420401 POLR2MP0CAP2 368 aa21■□□□□ 0.95
ECHDC3-202ENST00000420401 HSD17B4P51659 736 aa21■□□□□ 0.95
ECHDC3-202ENST00000420401 CCDC144BQ3MJ40 725 aa21■□□□□ 0.95
ECHDC3-202ENST00000420401 C8orf34Q49A92 452 aa21■□□□□ 0.95
ECHDC3-202ENST00000420401 CDX2Q99626 313 aaPredicted RBP21■□□□□ 0.95
ECHDC3-202ENST00000420401 XPNPEP3Q9NQH7 507 aa21■□□□□ 0.95
ECHDC3-202ENST00000420401 GJC2Q5T442 439 aaPredicted RBP20.99■□□□□ 0.95
ECHDC3-202ENST00000420401 MAFAQ8NHW3 353 aaPredicted RBP20.99■□□□□ 0.95
ECHDC3-202ENST00000420401 IL17RAQ96F46 866 aa20.99■□□□□ 0.95
ECHDC3-202ENST00000420401 TAAR1Q96RJ0 339 aa20.99■□□□□ 0.95
ECHDC3-202ENST00000420401 IWS1Q96ST2 819 aa20.99■□□□□ 0.95
ECHDC3-202ENST00000420401 RMDN3Q96TC7 470 aa20.99■□□□□ 0.95
ECHDC3-202ENST00000420401 PRDM5Q9NQX1 630 aaPredicted RBP20.99■□□□□ 0.95
ECHDC3-202ENST00000420401 FAM217BQ9NTX9 383 aaPredicted RBP20.99■□□□□ 0.95
ECHDC3-202ENST00000420401 KBTBD13C9JR72 458 aa20.98■□□□□ 0.95
ECHDC3-202ENST00000420401 DUSP11O75319 330 aaKnown RBP20.98■□□□□ 0.95
ECHDC3-202ENST00000420401 MYCNP04198 464 aaPredicted RBP20.98■□□□□ 0.95
ECHDC3-202ENST00000420401 PDIA3P30101 505 aaKnown RBP20.98■□□□□ 0.95
ECHDC3-202ENST00000420401 CDC27P30260 824 aa20.98■□□□□ 0.95
ECHDC3-202ENST00000420401 ADD1P35611 737 aaKnown RBP20.98■□□□□ 0.95
ECHDC3-202ENST00000420401 TOB2Q14106 344 aaPredicted RBP20.98■□□□□ 0.95
ECHDC3-202ENST00000420401 SHHQ15465 462 aa20.98■□□□□ 0.95
ECHDC3-202ENST00000420401 ARHGEF16Q5VV41 709 aa20.98■□□□□ 0.95
ECHDC3-202ENST00000420401 IQSEC1Q6DN90 963 aa20.98■□□□□ 0.95
ECHDC3-202ENST00000420401 EEPD1Q7L9B9 569 aa20.98■□□□□ 0.95
ECHDC3-202ENST00000420401 RNF180Q86T96 592 aa20.98■□□□□ 0.95
ECHDC3-202ENST00000420401 CUL5Q93034 780 aa20.98■□□□□ 0.95
ECHDC3-202ENST00000420401 SEMA6BQ9H3T3 888 aa20.98■□□□□ 0.95
ECHDC3-202ENST00000420401 COL20A1Q9P218 1284 aa20.98■□□□□ 0.95
ECHDC3-202ENST00000420401 DDX49Q9Y6V7 483 aaKnown RBP20.98■□□□□ 0.95
ECHDC3-202ENST00000420401 V9GY48 417 aaPredicted RBP20.98■□□□□ 0.95
ECHDC3-202ENST00000420401 CNTNAP5Q8WYK1 1306 aa20.98■□□□□ 0.95
ECHDC3-202ENST00000420401 MYH6P13533 1939 aa20.98■□□□□ 0.95
ECHDC3-202ENST00000420401 NID2Q14112 1375 aa20.97■□□□□ 0.95
ECHDC3-202ENST00000420401 hCG_1642624A0A1W2PR95 340 aa20.97■□□□□ 0.95
ECHDC3-202ENST00000420401 EDNRBP24530 442 aa20.97■□□□□ 0.95
ECHDC3-202ENST00000420401 HOXA13P31271 388 aaPredicted RBP20.97■□□□□ 0.95
ECHDC3-202ENST00000420401 TNFAIP2Q03169 654 aa20.97■□□□□ 0.95
ECHDC3-202ENST00000420401 FUT2Q10981 343 aa20.97■□□□□ 0.95
ECHDC3-202ENST00000420401 NOL8Q76FK4 1167 aaKnown RBP20.97■□□□□ 0.95
ECHDC3-202ENST00000420401 HEATR3Q7Z4Q2 680 aa20.97■□□□□ 0.95
ECHDC3-202ENST00000420401 FBXO16Q8IX29 292 aaPredicted RBP20.97■□□□□ 0.95
ECHDC3-202ENST00000420401 ZNF274Q96GC6 653 aaPredicted RBP20.97■□□□□ 0.95
ECHDC3-202ENST00000420401 ALDH8A1Q9H2A2 487 aaPredicted RBP20.97■□□□□ 0.95
ECHDC3-202ENST00000420401 SPC25Q9HBM1 224 aa20.97■□□□□ 0.95
ECHDC3-202ENST00000420401 BAZ2BQ9UIF8 2168 aaKnown RBP20.97■□□□□ 0.95
ECHDC3-202ENST00000420401 ANKRD1Q15327 319 aa20.96■□□□□ 0.95
ECHDC3-202ENST00000420401 LRRC41Q15345 812 aa20.96■□□□□ 0.95
ECHDC3-202ENST00000420401 TAPT1Q6NXT6 567 aa20.96■□□□□ 0.95
ECHDC3-202ENST00000420401 SLC39A5Q6ZMH5 540 aa20.96■□□□□ 0.95
ECHDC3-202ENST00000420401 PXMP2Q9NR77 195 aa20.96■□□□□ 0.95
ECHDC3-202ENST00000420401 GTF3C3Q9Y5Q9 886 aa20.96■□□□□ 0.95
ECHDC3-202ENST00000420401 EYSQ5T1H1 3165 aa20.95■□□□□ 0.94
ECHDC3-202ENST00000420401 PGK1P00558 417 aa20.95■□□□□ 0.94
ECHDC3-202ENST00000420401 EIF2AK2P19525 551 aaKnown RBP20.95■□□□□ 0.94
ECHDC3-202ENST00000420401 ADCYAP1R1P41586 468 aa20.95■□□□□ 0.94
ECHDC3-202ENST00000420401 STXBP2Q15833 593 aa20.95■□□□□ 0.94
ECHDC3-202ENST00000420401 FCHSD1Q86WN1 690 aa20.95■□□□□ 0.94
ECHDC3-202ENST00000420401 SMARCC2Q8TAQ2 1214 aa20.95■□□□□ 0.94
ECHDC3-202ENST00000420401 LENG1Q96BZ8 264 aaPredicted RBP20.95■□□□□ 0.94
ECHDC3-202ENST00000420401 PSTPIP2Q9H939 334 aa20.95■□□□□ 0.94
ECHDC3-202ENST00000420401 PDGFCQ9NRA1 345 aa20.95■□□□□ 0.94
ECHDC3-202ENST00000420401 VCANP13611 3396 aa20.94■□□□□ 0.94
ECHDC3-202ENST00000420401 hCG_1984214I3L0E3 225 aa20.94■□□□□ 0.94
ECHDC3-202ENST00000420401 PIK3CDO00329 1044 aa20.94■□□□□ 0.94
ECHDC3-202ENST00000420401 CCT2P78371 535 aaKnown RBP20.94■□□□□ 0.94
ECHDC3-202ENST00000420401 AKAP17AQ02040 695 aaKnown RBP20.94■□□□□ 0.94
ECHDC3-202ENST00000420401 C9orf50Q5SZB4 431 aa20.94■□□□□ 0.94
ECHDC3-202ENST00000420401 ZNF713Q8N859 430 aaPredicted RBP20.94■□□□□ 0.94
ECHDC3-202ENST00000420401 BADQ92934 168 aa20.94■□□□□ 0.94
ECHDC3-202ENST00000420401 SYNRGQ9UMZ2 1314 aa20.94■□□□□ 0.94
ECHDC3-202ENST00000420401 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.93■□□□□ 0.94
ECHDC3-202ENST00000420401 RBM47A0AV96 593 aaKnown RBP20.93■□□□□ 0.94
ECHDC3-202ENST00000420401 ADCY6O43306 1168 aa20.93■□□□□ 0.94
ECHDC3-202ENST00000420401 PRPF3O43395 683 aaKnown RBP20.93■□□□□ 0.94
ECHDC3-202ENST00000420401 ADAMTS4O75173 837 aa20.93■□□□□ 0.94
ECHDC3-202ENST00000420401 EIF3JO75822 258 aaKnown RBP20.93■□□□□ 0.94
ECHDC3-202ENST00000420401 NR3C2P08235 984 aa20.93■□□□□ 0.94
ECHDC3-202ENST00000420401 SMPD1P17405 629 aa20.93■□□□□ 0.94
ECHDC3-202ENST00000420401 GJA9P57773 515 aa20.93■□□□□ 0.94
ECHDC3-202ENST00000420401 WWC2Q6AWC2 1192 aa20.93■□□□□ 0.94
ECHDC3-202ENST00000420401 PPP1R18Q6NYC8 613 aa20.93■□□□□ 0.94
ECHDC3-202ENST00000420401 SCFD2Q8WU76 684 aa20.93■□□□□ 0.94
ECHDC3-202ENST00000420401 MYLIPQ8WY64 445 aa20.93■□□□□ 0.94
ECHDC3-202ENST00000420401 GPKOWQ92917 476 aaPredicted RBP eCLIP20.93■□□□□ 0.94
ECHDC3-202ENST00000420401 LARP6Q9BRS8 491 aaKnown RBP20.93■□□□□ 0.94
ECHDC3-202ENST00000420401 TSEN34Q9BSV6 310 aaKnown RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms