RNA–Protein interactions for RNA: ENST00000420115.6

CDV3-202, Transcript of CDV3 homolog, humanhuman

TSL 2 BASIC

Gene CDV3, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-202ENST00000420115 THAP9Q9H5L6 903 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 TRPM3Q9HCF6 1732 aaPredicted RBP11.17□□□□□ -0.62
CDV3-202ENST00000420115 TMCO5BA8MYB1 307 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 ZSCAN9O15535 394 aaPredicted RBP11.17□□□□□ -0.62
CDV3-202ENST00000420115 UQCRFS1P1P0C7P4 283 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 SRGNP10124 158 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 TRIM21P19474 475 aaKnown RBP11.17□□□□□ -0.62
CDV3-202ENST00000420115 VAV2P52735 878 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 MRPS25P82663 173 aaKnown RBP11.17□□□□□ -0.62
CDV3-202ENST00000420115 CYP27A1Q02318 531 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 DBN1Q16643 649 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 SPRED3Q2MJR0 410 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 KCTD16Q68DU8 428 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 BZW1Q7L1Q6 419 aaKnown RBP11.17□□□□□ -0.62
CDV3-202ENST00000420115 VGLL2Q8N8G2 317 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 TNFRSF25Q93038 417 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 CAVIN3Q969G5 261 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 NUP58Q9BVL2 599 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 CNNM1Q9NRU3 951 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 BACH1O14867 736 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 SETSIPP0DME0 302 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 PRLRP16471 622 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 PMS1P54277 932 aaKnown RBP11.17□□□□□ -0.62
CDV3-202ENST00000420115 SLC7A5Q01650 507 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 PPARAQ07869 468 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 TRIM28Q13263 835 aaKnown RBP11.17□□□□□ -0.62
CDV3-202ENST00000420115 CYB5D1Q6P9G0 228 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 RETREG2Q8NC44 543 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 NACAP1Q9BZK3 213 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 STIM2Q9P246 746 aa11.17□□□□□ -0.62
CDV3-202ENST00000420115 hCG_1642624A0A1W2PR95 340 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 PRPF3O43395 683 aaKnown RBP11.16□□□□□ -0.62
CDV3-202ENST00000420115 ITGA6P23229 1130 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 KRT28Q7Z3Y7 464 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 ZBTB38Q8NAP3 1195 aaPredicted RBP11.16□□□□□ -0.62
CDV3-202ENST00000420115 MAGEC2Q9UBF1 373 aaPredicted RBP11.16□□□□□ -0.62
CDV3-202ENST00000420115 MYH2Q9UKX2 1941 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 FER1L4A9Z1Z3 1794 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 RTL9Q8NET4 1388 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 NUTM2BA6NNL0 878 aaPredicted RBP11.16□□□□□ -0.62
CDV3-202ENST00000420115 NUTM2EB1AL46 878 aaPredicted RBP11.16□□□□□ -0.62
CDV3-202ENST00000420115 B4DLN1 442 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 PRKAB2O43741 272 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 PRPHP41219 470 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 FUT2Q10981 343 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 MAP3K12Q12852 859 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 RNF41Q9H4P4 317 aaPredicted RBP11.16□□□□□ -0.62
CDV3-202ENST00000420115 EXOC1Q9NV70 894 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 SOS2Q07890 1332 aaPredicted RBP11.16□□□□□ -0.62
CDV3-202ENST00000420115 MAP3K13O43283 966 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 TACC1O75410 805 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 PDE8BO95263 885 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 TNFRSF8P28908 595 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 SEC24CP53992 1094 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 IL17AQ16552 155 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 YTHDF3Q7Z739 585 aaKnown RBP11.16□□□□□ -0.62
CDV3-202ENST00000420115 SH2D3CQ8N5H7 860 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 ZIM3Q96PE6 472 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 PAGR1Q9BTK6 254 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 LRWD1Q9UFC0 647 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 V9GY48 417 aaPredicted RBP11.16□□□□□ -0.62
CDV3-202ENST00000420115 SPATA31A3Q5VYP0 1347 aa11.16□□□□□ -0.62
CDV3-202ENST00000420115 RASSF10A6NK89 507 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 SMIM24O75264 130 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 ZNF189O75820 626 aaPredicted RBP11.15□□□□□ -0.62
CDV3-202ENST00000420115 MATR3P43243 847 aaKnown RBP eCLIP11.15□□□□□ -0.62
CDV3-202ENST00000420115 CDK17Q00537 523 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 NNTQ13423 1086 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 SEC23AQ15436 765 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 SPA17Q15506 151 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 NPY5RQ15761 445 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 HAUS3Q68CZ6 603 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 MICALCLQ6ZW33 695 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 PHC3Q8NDX5 983 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 SMCR8Q8TEV9 937 aaPredicted RBP11.15□□□□□ -0.62
CDV3-202ENST00000420115 TRIM47Q96LD4 638 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 GREM2Q9H772 168 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 CAPN6Q9Y6Q1 641 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 TNKSO95271 1327 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 ZNF263O14978 683 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 GNAT2P19087 354 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 FUT4P22083 530 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 CCDC178Q5BJE1 867 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 KDM7AQ6ZMT4 941 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 OSBPL9Q96SU4 736 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 TUBGCP2Q9BSJ2 902 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 EPN3Q9H201 632 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 PAPOLBQ9NRJ5 636 aaKnown RBP11.15□□□□□ -0.62
CDV3-202ENST00000420115 PCDHGC5Q9Y5F6 944 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 SLC4A4Q9Y6R1 1079 aa11.15□□□□□ -0.62
CDV3-202ENST00000420115 USO1O60763 962 aaKnown RBP11.15□□□□□ -0.63
CDV3-202ENST00000420115 KRT14P02533 472 aa11.15□□□□□ -0.63
CDV3-202ENST00000420115 TCP1P17987 556 aaKnown RBP11.15□□□□□ -0.63
CDV3-202ENST00000420115 LSP1P33241 339 aa11.15□□□□□ -0.63
CDV3-202ENST00000420115 MIS18BP1Q6P0N0 1132 aa11.15□□□□□ -0.63
CDV3-202ENST00000420115 SPATA5Q8NB90 893 aa11.15□□□□□ -0.63
CDV3-202ENST00000420115 CCDC42Q96M95 316 aa11.15□□□□□ -0.63
CDV3-202ENST00000420115 SH2D4AQ9H788 454 aa11.15□□□□□ -0.63
CDV3-202ENST00000420115 TRPC6Q9Y210 931 aa11.15□□□□□ -0.63
CDV3-202ENST00000420115 UBR2Q8IWV8 1755 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms