RNA–Protein interactions for RNA: ENST00000419799.5

NOD1-205, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-205ENST00000419799 ORC4O43929 436 aa16.22■□□□□ 0.19
NOD1-205ENST00000419799 ALAS1P13196 640 aa16.22■□□□□ 0.19
NOD1-205ENST00000419799 CHMLP26374 656 aa16.22■□□□□ 0.19
NOD1-205ENST00000419799 PURAQ00577 322 aaKnown RBP16.22■□□□□ 0.19
NOD1-205ENST00000419799 TMEM63BQ5T3F8 832 aa16.22■□□□□ 0.19
NOD1-205ENST00000419799 KRT40Q6A162 431 aa16.22■□□□□ 0.19
NOD1-205ENST00000419799 MFSD6Q6ZSS7 791 aa16.22■□□□□ 0.19
NOD1-205ENST00000419799 KIAA1211Q6ZU35 1233 aa16.22■□□□□ 0.19
NOD1-205ENST00000419799 CENPQQ7L2Z9 268 aaPredicted RBP16.22■□□□□ 0.19
NOD1-205ENST00000419799 EEPD1Q7L9B9 569 aa16.22■□□□□ 0.19
NOD1-205ENST00000419799 ARNTL2Q8WYA1 636 aa16.22■□□□□ 0.19
NOD1-205ENST00000419799 C11orf16Q9NQ32 467 aa16.22■□□□□ 0.19
NOD1-205ENST00000419799 ZMYM6O95789 1325 aa16.21■□□□□ 0.19
NOD1-205ENST00000419799 PITPNM1O00562 1244 aa16.21■□□□□ 0.19
NOD1-205ENST00000419799 RASGRP2Q7LDG7 609 aa16.21■□□□□ 0.19
NOD1-205ENST00000419799 HERC6Q8IVU3 1022 aa16.21■□□□□ 0.19
NOD1-205ENST00000419799 CCDC136Q96JN2 1154 aa16.21■□□□□ 0.19
NOD1-205ENST00000419799 DDX49Q9Y6V7 483 aaKnown RBP16.21■□□□□ 0.19
NOD1-205ENST00000419799 NEDD4P46934 1319 aa16.2■□□□□ 0.18
NOD1-205ENST00000419799 LOC102724159A0A0B4J2E5 919 aa16.2■□□□□ 0.18
NOD1-205ENST00000419799 PI4K2BG5E9Z4 385 aa16.2■□□□□ 0.18
NOD1-205ENST00000419799 BAIAP3O94812 1187 aa16.2■□□□□ 0.18
NOD1-205ENST00000419799 ARHGEF15O94989 841 aa16.2■□□□□ 0.18
NOD1-205ENST00000419799 NEFLP07196 543 aa16.2■□□□□ 0.18
NOD1-205ENST00000419799 FGRP09769 529 aa16.2■□□□□ 0.18
NOD1-205ENST00000419799 IQCF3P0C7M6 154 aa16.2■□□□□ 0.18
NOD1-205ENST00000419799 MCCP23508 829 aa16.2■□□□□ 0.18
NOD1-205ENST00000419799 SLC1A4P43007 532 aa16.2■□□□□ 0.18
NOD1-205ENST00000419799 CPT1AP50416 773 aa16.2■□□□□ 0.18
NOD1-205ENST00000419799 IKQ13123 557 aaPredicted RBP16.2■□□□□ 0.18
NOD1-205ENST00000419799 GRB10Q13322 594 aa16.2■□□□□ 0.18
NOD1-205ENST00000419799 PWP2Q15269 919 aaKnown RBP16.2■□□□□ 0.18
NOD1-205ENST00000419799 MUM1L1Q5H9M0 696 aa16.2■□□□□ 0.18
NOD1-205ENST00000419799 RUFY2Q8WXA3 655 aa16.2■□□□□ 0.18
NOD1-205ENST00000419799 KHSRPQ92945 711 aaKnown RBP eCLIP16.2■□□□□ 0.18
NOD1-205ENST00000419799 ZKSCAN3Q9BRR0 538 aa16.2■□□□□ 0.18
NOD1-205ENST00000419799 MTG1Q9BT17 334 aaPredicted RBP16.2■□□□□ 0.18
NOD1-205ENST00000419799 DSCC1Q9BVC3 393 aa16.2■□□□□ 0.18
NOD1-205ENST00000419799 PRRC2BQ5JSZ5 2229 aaKnown RBP16.2■□□□□ 0.18
NOD1-205ENST00000419799 LPXNO60711 386 aa16.19■□□□□ 0.18
NOD1-205ENST00000419799 IMMTQ16891 758 aaKnown RBP16.19■□□□□ 0.18
NOD1-205ENST00000419799 NFRKBQ6P4R8 1299 aa16.19■□□□□ 0.18
NOD1-205ENST00000419799 KCTD1Q719H9 257 aa16.19■□□□□ 0.18
NOD1-205ENST00000419799 RETREG2Q8NC44 543 aa16.19■□□□□ 0.18
NOD1-205ENST00000419799 RNF41Q9H4P4 317 aaPredicted RBP16.19■□□□□ 0.18
NOD1-205ENST00000419799 GPHNQ9NQX3 736 aaPredicted RBP16.19■□□□□ 0.18
NOD1-205ENST00000419799 LMCD1Q9NZU5 365 aa16.19■□□□□ 0.18
NOD1-205ENST00000419799 SCN5AQ14524 2016 aa16.18■□□□□ 0.18
NOD1-205ENST00000419799 RBM47A0AV96 593 aaKnown RBP16.18■□□□□ 0.18
NOD1-205ENST00000419799 MYL3P08590 195 aa16.18■□□□□ 0.18
NOD1-205ENST00000419799 SNAP25P60880 206 aa16.18■□□□□ 0.18
NOD1-205ENST00000419799 PTH1RQ03431 593 aa16.18■□□□□ 0.18
NOD1-205ENST00000419799 PTPN11Q06124 597 aaPredicted RBP16.18■□□□□ 0.18
NOD1-205ENST00000419799 CCDC96Q2M329 555 aa16.18■□□□□ 0.18
NOD1-205ENST00000419799 PPP4R3BQ5MIZ7 849 aa16.18■□□□□ 0.18
NOD1-205ENST00000419799 RCSD1Q6JBY9 416 aa16.18■□□□□ 0.18
NOD1-205ENST00000419799 NSMFQ6X4W1 530 aa16.18■□□□□ 0.18
NOD1-205ENST00000419799 WDR11Q9BZH6 1224 aa16.18■□□□□ 0.18
NOD1-205ENST00000419799 ADD3Q9UEY8 706 aaKnown RBP16.18■□□□□ 0.18
NOD1-205ENST00000419799 CTNNA3Q9UI47 895 aa16.18■□□□□ 0.18
NOD1-205ENST00000419799 PRR12Q9ULL5 1215 aa16.18■□□□□ 0.18
NOD1-205ENST00000419799 TRANK1O15050 2925 aa16.18■□□□□ 0.18
NOD1-205ENST00000419799 TANC1Q9C0D5 1861 aa16.17■□□□□ 0.18
NOD1-205ENST00000419799 B4E1Z4 1266 aa16.17■□□□□ 0.18
NOD1-205ENST00000419799 KPNA6O60684 536 aa16.17■□□□□ 0.18
NOD1-205ENST00000419799 KDM4AO75164 1064 aa16.17■□□□□ 0.18
NOD1-205ENST00000419799 ALDH5A1P51649 535 aaPredicted RBP16.17■□□□□ 0.18
NOD1-205ENST00000419799 BFSP2Q13515 415 aa16.17■□□□□ 0.18
NOD1-205ENST00000419799 NBPF20Q3BBV1 942 aa16.17■□□□□ 0.18
NOD1-205ENST00000419799 BRDTQ58F21 947 aaPredicted RBP16.17■□□□□ 0.18
NOD1-205ENST00000419799 FAM47CQ5HY64 1035 aa16.17■□□□□ 0.18
NOD1-205ENST00000419799 ESR2Q92731 530 aa16.17■□□□□ 0.18
NOD1-205ENST00000419799 PURBQ96QR8 312 aaKnown RBP16.17■□□□□ 0.18
NOD1-205ENST00000419799 TMEM47Q9BQJ4 181 aa16.17■□□□□ 0.18
NOD1-205ENST00000419799 FTOQ9C0B1 505 aaKnown RBP eCLIP16.17■□□□□ 0.18
NOD1-205ENST00000419799 CCPG1Q9ULG6 757 aa16.17■□□□□ 0.18
NOD1-205ENST00000419799 LCTP09848 1927 aa16.17■□□□□ 0.18
NOD1-205ENST00000419799 FRMPD2Q68DX3 1309 aaPredicted RBP16.17■□□□□ 0.18
NOD1-205ENST00000419799 RAD50Q92878 1312 aa16.17■□□□□ 0.18
NOD1-205ENST00000419799 FAM86C2PA6NEL3 165 aa16.16■□□□□ 0.18
NOD1-205ENST00000419799 PRR33A8MZF0 331 aa16.16■□□□□ 0.18
NOD1-205ENST00000419799 NKRFO15226 690 aaKnown RBP eCLIP16.16■□□□□ 0.18
NOD1-205ENST00000419799 ICAM1P05362 532 aa16.16■□□□□ 0.18
NOD1-205ENST00000419799 OR6J1Q8NGC5 347 aa16.16■□□□□ 0.18
NOD1-205ENST00000419799 GPCPD1Q9NPB8 672 aa16.16■□□□□ 0.18
NOD1-205ENST00000419799 CD320Q9NPF0 282 aa16.16■□□□□ 0.18
NOD1-205ENST00000419799 SCN10AQ9Y5Y9 1956 aa16.16■□□□□ 0.18
NOD1-205ENST00000419799 COL4A4P53420 1690 aaPredicted RBP16.15■□□□□ 0.18
NOD1-205ENST00000419799 SGSM2O43147 1006 aa16.15■□□□□ 0.18
NOD1-205ENST00000419799 TOP1P11387 765 aaKnown RBP16.15■□□□□ 0.18
NOD1-205ENST00000419799 PCP11498 1178 aaKnown RBP16.15■□□□□ 0.18
NOD1-205ENST00000419799 KCNJ6P48051 423 aa16.15■□□□□ 0.18
NOD1-205ENST00000419799 BAATQ14032 418 aaPredicted RBP16.15■□□□□ 0.18
NOD1-205ENST00000419799 TTBK2Q6IQ55 1244 aa16.15■□□□□ 0.18
NOD1-205ENST00000419799 TCP11L1Q9NUJ3 509 aa16.15■□□□□ 0.18
NOD1-205ENST00000419799 A6NJR5 290 aa16.14■□□□□ 0.17
NOD1-205ENST00000419799 SLC16A2P36021 539 aa16.14■□□□□ 0.17
NOD1-205ENST00000419799 SPRED2Q7Z698 418 aa16.14■□□□□ 0.17
NOD1-205ENST00000419799 CAGE1Q8TC20 777 aa16.14■□□□□ 0.17
NOD1-205ENST00000419799 RANBP17Q9H2T7 1088 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms