RNA–Protein interactions for RNA: ENST00000418674.1

PTPRC-207, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-207ENST00000418674 ZC3H12DA2A288 527 aaKnown RBP4.31□□□□□ -1.72
PTPRC-207ENST00000418674 FAM221BA6H8Z2 402 aa4.31□□□□□ -1.72
PTPRC-207ENST00000418674 NPHS1O60500 1241 aa4.31□□□□□ -1.72
PTPRC-207ENST00000418674 NCKAP1LP55160 1127 aa4.31□□□□□ -1.72
PTPRC-207ENST00000418674 FXNQ16595 210 aa4.31□□□□□ -1.72
PTPRC-207ENST00000418674 LCE4AQ5TA78 99 aa4.31□□□□□ -1.72
PTPRC-207ENST00000418674 SDE2Q6IQ49 451 aa4.31□□□□□ -1.72
PTPRC-207ENST00000418674 LILRA6Q6PI73 481 aa4.31□□□□□ -1.72
PTPRC-207ENST00000418674 FAM129CQ86XR2 697 aa4.31□□□□□ -1.72
PTPRC-207ENST00000418674 CPNE8Q86YQ8 564 aa4.31□□□□□ -1.72
PTPRC-207ENST00000418674 NLGN1Q8N2Q7 840 aa4.31□□□□□ -1.72
PTPRC-207ENST00000418674 ZNF513Q8N8E2 541 aaPredicted RBP4.31□□□□□ -1.72
PTPRC-207ENST00000418674 MICAL1Q8TDZ2 1067 aa4.31□□□□□ -1.72
PTPRC-207ENST00000418674 DEPDC7Q96QD5 511 aa4.31□□□□□ -1.72
PTPRC-207ENST00000418674 KRTAP17-1Q9BYP8 105 aa4.31□□□□□ -1.72
PTPRC-207ENST00000418674 CCDC113Q9H0I3 377 aa4.31□□□□□ -1.72
PTPRC-207ENST00000418674 EPB41L4AQ9HCS5 686 aaPredicted RBP4.31□□□□□ -1.72
PTPRC-207ENST00000418674 PARD6AQ9NPB6 346 aa4.31□□□□□ -1.72
PTPRC-207ENST00000418674 NUDT5Q9UKK9 219 aa4.31□□□□□ -1.72
PTPRC-207ENST00000418674 EMC9Q9Y3B6 208 aa4.31□□□□□ -1.72
PTPRC-207ENST00000418674 RWDD3Q9Y3V2 267 aa4.31□□□□□ -1.72
PTPRC-207ENST00000418674 GLI4P10075 376 aa4.3□□□□□ -1.72
PTPRC-207ENST00000418674 PRR5P85299 388 aa4.3□□□□□ -1.72
PTPRC-207ENST00000418674 SCRN1Q12765 414 aa4.3□□□□□ -1.72
PTPRC-207ENST00000418674 RASGRF1Q13972 1273 aa4.3□□□□□ -1.72
PTPRC-207ENST00000418674 LARP1BQ659C4 914 aaKnown RBP4.3□□□□□ -1.72
PTPRC-207ENST00000418674 TRIM59Q8IWR1 403 aa4.3□□□□□ -1.72
PTPRC-207ENST00000418674 NETO2Q8NC67 525 aa4.3□□□□□ -1.72
PTPRC-207ENST00000418674 USP33Q8TEY7 942 aa4.3□□□□□ -1.72
PTPRC-207ENST00000418674 ALG3Q92685 438 aa4.3□□□□□ -1.72
PTPRC-207ENST00000418674 PEX11GQ96HA9 241 aa4.3□□□□□ -1.72
PTPRC-207ENST00000418674 PWWP2AQ96N64 755 aa4.3□□□□□ -1.72
PTPRC-207ENST00000418674 RNF38Q9H0F5 515 aa4.3□□□□□ -1.72
PTPRC-207ENST00000418674 ST7Q9NRC1 585 aa4.3□□□□□ -1.72
PTPRC-207ENST00000418674 CLEC1BQ9P126 229 aa4.3□□□□□ -1.72
PTPRC-207ENST00000418674 GULP1Q9UBP9 304 aa4.3□□□□□ -1.72
PTPRC-207ENST00000418674 FAN1Q9Y2M0 1017 aa4.3□□□□□ -1.72
PTPRC-207ENST00000418674 HCFC2Q9Y5Z7 792 aa4.3□□□□□ -1.72
PTPRC-207ENST00000418674 C7orf72A4D263 438 aa4.29□□□□□ -1.72
PTPRC-207ENST00000418674 PDPK1O15530 556 aa4.29□□□□□ -1.72
PTPRC-207ENST00000418674 TRIM13O60858 407 aa4.29□□□□□ -1.72
PTPRC-207ENST00000418674 SASH1O94885 1247 aa4.29□□□□□ -1.72
PTPRC-207ENST00000418674 GJB6O95452 261 aa4.29□□□□□ -1.72
PTPRC-207ENST00000418674 NCAM1P13591 858 aa4.29□□□□□ -1.72
PTPRC-207ENST00000418674 PLS3P13797 630 aa4.29□□□□□ -1.72
PTPRC-207ENST00000418674 HOXA5P20719 270 aa4.29□□□□□ -1.72
PTPRC-207ENST00000418674 IGFBP6P24592 240 aaPredicted RBP4.29□□□□□ -1.72
PTPRC-207ENST00000418674 CTSWP56202 376 aa4.29□□□□□ -1.72
PTPRC-207ENST00000418674 GTF2IRD2BQ6EKJ0 949 aa4.29□□□□□ -1.72
PTPRC-207ENST00000418674 C6orf15Q6UXA7 325 aaPredicted RBP4.29□□□□□ -1.72
PTPRC-207ENST00000418674 GTF2IRD2Q86UP8 949 aa4.29□□□□□ -1.72
PTPRC-207ENST00000418674 FAM178BQ8IXR5 827 aa4.29□□□□□ -1.72
PTPRC-207ENST00000418674 MARCH10Q8NA82 808 aaPredicted RBP4.29□□□□□ -1.72
PTPRC-207ENST00000418674 COPS5Q92905 334 aa4.29□□□□□ -1.72
PTPRC-207ENST00000418674 KCNC2Q96PR1 638 aa4.29□□□□□ -1.72
PTPRC-207ENST00000418674 MMP19Q99542 508 aa4.29□□□□□ -1.72
PTPRC-207ENST00000418674 NKX2-4Q9H2Z4 354 aa4.29□□□□□ -1.72
PTPRC-207ENST00000418674 CYP26B1Q9NR63 512 aa4.29□□□□□ -1.72
PTPRC-207ENST00000418674 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.29□□□□□ -1.72
PTPRC-207ENST00000418674 LRP2BPQ9P2M1 347 aa4.29□□□□□ -1.72
PTPRC-207ENST00000418674 MRPL42Q9Y6G3 142 aaKnown RBP4.29□□□□□ -1.72
PTPRC-207ENST00000418674 CCDC85CA6NKD9 419 aa4.28□□□□□ -1.72
PTPRC-207ENST00000418674 B2RBV5 119 aa4.28□□□□□ -1.72
PTPRC-207ENST00000418674 DDAH1O94760 285 aa4.28□□□□□ -1.72
PTPRC-207ENST00000418674 FUCA1P04066 466 aa4.28□□□□□ -1.72
PTPRC-207ENST00000418674 THBDP07204 575 aa4.28□□□□□ -1.72
PTPRC-207ENST00000418674 FBLN1P23142 703 aa4.28□□□□□ -1.72
PTPRC-207ENST00000418674 LIMS1P48059 325 aa4.28□□□□□ -1.72
PTPRC-207ENST00000418674 CAP1Q01518 475 aa4.28□□□□□ -1.72
PTPRC-207ENST00000418674 SLC9A5Q14940 896 aa4.28□□□□□ -1.72
PTPRC-207ENST00000418674 VMACQ2NL98 169 aa4.28□□□□□ -1.72
PTPRC-207ENST00000418674 SV2CQ496J9 727 aa4.28□□□□□ -1.72
PTPRC-207ENST00000418674 WWC2Q6AWC2 1192 aa4.28□□□□□ -1.72
PTPRC-207ENST00000418674 SP8Q8IXZ3 490 aa4.28□□□□□ -1.72
PTPRC-207ENST00000418674 LINC01356Q8N9X3 169 aa4.28□□□□□ -1.72
PTPRC-207ENST00000418674 TSPAN17Q96FV3 270 aa4.28□□□□□ -1.72
PTPRC-207ENST00000418674 MRGPRX3Q96LB0 322 aa4.28□□□□□ -1.72
PTPRC-207ENST00000418674 RNPC3Q96LT9 517 aaKnown RBP4.28□□□□□ -1.72
PTPRC-207ENST00000418674 MTA3Q9BTC8 594 aa4.28□□□□□ -1.72
PTPRC-207ENST00000418674 RXFP1Q9HBX9 757 aa4.28□□□□□ -1.72
PTPRC-207ENST00000418674 GPRC5CQ9NQ84 441 aa4.28□□□□□ -1.72
PTPRC-207ENST00000418674 ADAMTS20P59510 1910 aa4.27□□□□□ -1.73
PTPRC-207ENST00000418674 SUSD5O60279 629 aa4.27□□□□□ -1.73
PTPRC-207ENST00000418674 PPP1R11O60927 126 aaPredicted RBP4.27□□□□□ -1.73
PTPRC-207ENST00000418674 ZBTB7AO95365 584 aa4.27□□□□□ -1.73
PTPRC-207ENST00000418674 ASGR2P07307 311 aa4.27□□□□□ -1.73
PTPRC-207ENST00000418674 FOXO4P98177 505 aa4.27□□□□□ -1.73
PTPRC-207ENST00000418674 IFRD2Q12894 506 aaPredicted RBP4.27□□□□□ -1.73
PTPRC-207ENST00000418674 EGFLAMQ63HQ2 1017 aa4.27□□□□□ -1.73
PTPRC-207ENST00000418674 MRM1Q6IN84 353 aaKnown RBP4.27□□□□□ -1.73
PTPRC-207ENST00000418674 IQCEQ6IPM2 695 aa4.27□□□□□ -1.73
PTPRC-207ENST00000418674 DCP2Q8IU60 420 aaKnown RBP4.27□□□□□ -1.73
PTPRC-207ENST00000418674 LILRB2Q8N423 598 aa4.27□□□□□ -1.73
PTPRC-207ENST00000418674 BTN2A2Q8WVV5 523 aa4.27□□□□□ -1.73
PTPRC-207ENST00000418674 DNAJC7Q99615 494 aa4.27□□□□□ -1.73
PTPRC-207ENST00000418674 MARCH2Q9P0N8 246 aa4.27□□□□□ -1.73
PTPRC-207ENST00000418674 FBLN5Q9UBX5 448 aa4.27□□□□□ -1.73
PTPRC-207ENST00000418674 PLA2G2DQ9UNK4 145 aa4.27□□□□□ -1.73
PTPRC-207ENST00000418674 PMF1-BGLAPU3KQ54 211 aa4.27□□□□□ -1.73
PTPRC-207ENST00000418674 ENPP3O14638 875 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms