RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 KIF5BP33176 963 aa19.11■□□□□ 0.65
LINC00404-201ENST00000418660 HSD17B4P51659 736 aa19.11■□□□□ 0.65
LINC00404-201ENST00000418660 FAAP100Q0VG06 881 aa19.11■□□□□ 0.65
LINC00404-201ENST00000418660 COL9A3Q14050 684 aaPredicted RBP19.11■□□□□ 0.65
LINC00404-201ENST00000418660 CXCL17Q6UXB2 119 aa19.11■□□□□ 0.65
LINC00404-201ENST00000418660 NFXL1Q6ZNB6 911 aa19.11■□□□□ 0.65
LINC00404-201ENST00000418660 SMARCA1P28370 1054 aa19.1■□□□□ 0.65
LINC00404-201ENST00000418660 PPP2R5BQ15173 497 aa19.1■□□□□ 0.65
LINC00404-201ENST00000418660 ARHGEF16Q5VV41 709 aa19.1■□□□□ 0.65
LINC00404-201ENST00000418660 BADQ92934 168 aa19.1■□□□□ 0.65
LINC00404-201ENST00000418660 LZTS2Q9BRK4 669 aa19.1■□□□□ 0.65
LINC00404-201ENST00000418660 MYL10Q9BUA6 226 aa19.1■□□□□ 0.65
LINC00404-201ENST00000418660 TMEM39AQ9NV64 488 aa19.1■□□□□ 0.65
LINC00404-201ENST00000418660 LTBP2Q14767 1821 aa19.09■□□□□ 0.65
LINC00404-201ENST00000418660 CALM1P0DP23 149 aa19.09■□□□□ 0.65
LINC00404-201ENST00000418660 CALM2P0DP24 149 aa19.09■□□□□ 0.65
LINC00404-201ENST00000418660 CALM3P0DP25 149 aa19.09■□□□□ 0.65
LINC00404-201ENST00000418660 GNAQP50148 359 aa19.09■□□□□ 0.65
LINC00404-201ENST00000418660 TTLL4Q14679 1199 aa19.09■□□□□ 0.65
LINC00404-201ENST00000418660 STXBP2Q15833 593 aa19.09■□□□□ 0.65
LINC00404-201ENST00000418660 LRIT3Q3SXY7 679 aa19.09■□□□□ 0.65
LINC00404-201ENST00000418660 TSGA10IPQ3SY00 556 aa19.09■□□□□ 0.65
LINC00404-201ENST00000418660 OR6J1Q8NGC5 347 aa19.09■□□□□ 0.65
LINC00404-201ENST00000418660 NEK1Q96PY6 1258 aa19.09■□□□□ 0.65
LINC00404-201ENST00000418660 SPZ1Q9BXG8 430 aa19.09■□□□□ 0.65
LINC00404-201ENST00000418660 MYH6P13533 1939 aa19.09■□□□□ 0.65
LINC00404-201ENST00000418660 RANBP2P49792 3224 aaKnown RBP19.08■□□□□ 0.65
LINC00404-201ENST00000418660 SOX1O00570 391 aaPredicted RBP19.08■□□□□ 0.64
LINC00404-201ENST00000418660 TXNP10599 105 aaKnown RBP19.08■□□□□ 0.64
LINC00404-201ENST00000418660 RAG1P15918 1043 aa19.08■□□□□ 0.64
LINC00404-201ENST00000418660 EIF2AK2P19525 551 aaKnown RBP19.08■□□□□ 0.64
LINC00404-201ENST00000418660 ITGB8P26012 769 aa19.08■□□□□ 0.64
LINC00404-201ENST00000418660 CPT1AP50416 773 aa19.08■□□□□ 0.64
LINC00404-201ENST00000418660 SLC43A3Q8NBI5 491 aa19.08■□□□□ 0.64
LINC00404-201ENST00000418660 SEZ6LQ9BYH1 1024 aa19.08■□□□□ 0.64
LINC00404-201ENST00000418660 PXMP2Q9NR77 195 aa19.08■□□□□ 0.64
LINC00404-201ENST00000418660 POLR3EQ9NVU0 708 aa19.08■□□□□ 0.64
LINC00404-201ENST00000418660 SLC12A7Q9Y666 1083 aa19.08■□□□□ 0.64
LINC00404-201ENST00000418660 GCOM1H8Y6P7 765 aaPredicted RBP19.07■□□□□ 0.64
LINC00404-201ENST00000418660 NR3C2P08235 984 aa19.07■□□□□ 0.64
LINC00404-201ENST00000418660 POLR2MP0CAP2 368 aa19.07■□□□□ 0.64
LINC00404-201ENST00000418660 ITGA7Q13683 1181 aa19.07■□□□□ 0.64
LINC00404-201ENST00000418660 KRT32Q14532 448 aa19.07■□□□□ 0.64
LINC00404-201ENST00000418660 CCDC62Q6P9F0 684 aa19.07■□□□□ 0.64
LINC00404-201ENST00000418660 SGMS1Q86VZ5 419 aa19.07■□□□□ 0.64
LINC00404-201ENST00000418660 FAM126BQ8IXS8 530 aa19.07■□□□□ 0.64
LINC00404-201ENST00000418660 RASEFQ8IZ41 740 aa19.07■□□□□ 0.64
LINC00404-201ENST00000418660 RRP36Q96EU6 259 aaKnown RBP19.07■□□□□ 0.64
LINC00404-201ENST00000418660 LRRC2Q9BYS8 371 aa19.07■□□□□ 0.64
LINC00404-201ENST00000418660 TLR3O15455 904 aaKnown RBP19.06■□□□□ 0.64
LINC00404-201ENST00000418660 EIF3JO75822 258 aaKnown RBP19.06■□□□□ 0.64
LINC00404-201ENST00000418660 ARIH2O95376 493 aa19.06■□□□□ 0.64
LINC00404-201ENST00000418660 HOXA13P31271 388 aaPredicted RBP19.06■□□□□ 0.64
LINC00404-201ENST00000418660 EXOSC10Q01780 885 aaKnown RBP19.06■□□□□ 0.64
LINC00404-201ENST00000418660 BRDTQ58F21 947 aaPredicted RBP19.06■□□□□ 0.64
LINC00404-201ENST00000418660 SEPT14Q6ZU15 432 aa19.06■□□□□ 0.64
LINC00404-201ENST00000418660 DHX32Q7L7V1 743 aaKnown RBP19.06■□□□□ 0.64
LINC00404-201ENST00000418660 PIBF1Q8WXW3 757 aa19.06■□□□□ 0.64
LINC00404-201ENST00000418660 COPS5Q92905 334 aa19.06■□□□□ 0.64
LINC00404-201ENST00000418660 LRCH3Q96II8 777 aa19.06■□□□□ 0.64
LINC00404-201ENST00000418660 PDCD2LQ9BRP1 358 aa19.06■□□□□ 0.64
LINC00404-201ENST00000418660 TBX21Q9UL17 535 aa19.06■□□□□ 0.64
LINC00404-201ENST00000418660 GRIN2DO15399 1336 aa19.05■□□□□ 0.64
LINC00404-201ENST00000418660 A6NJR5 290 aa19.05■□□□□ 0.64
LINC00404-201ENST00000418660 KPNA6O60684 536 aa19.05■□□□□ 0.64
LINC00404-201ENST00000418660 PLEKHA8P1O95397 391 aa19.05■□□□□ 0.64
LINC00404-201ENST00000418660 TIMP1P01033 207 aa19.05■□□□□ 0.64
LINC00404-201ENST00000418660 CD4P01730 458 aa19.05■□□□□ 0.64
LINC00404-201ENST00000418660 RXRAP19793 462 aa19.05■□□□□ 0.64
LINC00404-201ENST00000418660 PURAQ00577 322 aaKnown RBP19.05■□□□□ 0.64
LINC00404-201ENST00000418660 ADCK5Q3MIX3 580 aa19.05■□□□□ 0.64
LINC00404-201ENST00000418660 SYNE3Q6ZMZ3 975 aa19.05■□□□□ 0.64
LINC00404-201ENST00000418660 SRBD1Q8N5C6 995 aaKnown RBP19.05■□□□□ 0.64
LINC00404-201ENST00000418660 FANCBQ8NB91 859 aa19.05■□□□□ 0.64
LINC00404-201ENST00000418660 SEC63Q9UGP8 760 aaKnown RBP19.05■□□□□ 0.64
LINC00404-201ENST00000418660 DNAH12Q6ZR08 3092 aa19.04■□□□□ 0.64
LINC00404-201ENST00000418660 MYL3P08590 195 aa19.04■□□□□ 0.64
LINC00404-201ENST00000418660 PSMC6P62333 389 aa19.04■□□□□ 0.64
LINC00404-201ENST00000418660 VSIG10LQ86VR7 867 aa19.04■□□□□ 0.64
LINC00404-201ENST00000418660 KCNB2Q92953 911 aa19.04■□□□□ 0.64
LINC00404-201ENST00000418660 MTG1Q9BT17 334 aaPredicted RBP19.04■□□□□ 0.64
LINC00404-201ENST00000418660 GH1P01241 217 aa19.03■□□□□ 0.64
LINC00404-201ENST00000418660 HMGB1P09429 215 aaKnown RBP19.03■□□□□ 0.64
LINC00404-201ENST00000418660 MYCLP12524 364 aaPredicted RBP19.03■□□□□ 0.64
LINC00404-201ENST00000418660 FPGSQ05932 587 aa19.03■□□□□ 0.64
LINC00404-201ENST00000418660 PGM5Q15124 567 aa19.03■□□□□ 0.64
LINC00404-201ENST00000418660 SHHQ15465 462 aa19.03■□□□□ 0.64
LINC00404-201ENST00000418660 LY6KQ17RY6 165 aa19.03■□□□□ 0.64
LINC00404-201ENST00000418660 ERICH6BQ5W0A0 696 aa19.03■□□□□ 0.64
LINC00404-201ENST00000418660 GPR153Q6NV75 609 aa19.03■□□□□ 0.64
LINC00404-201ENST00000418660 FCHSD1Q86WN1 690 aa19.03■□□□□ 0.64
LINC00404-201ENST00000418660 RAB11FIP4Q86YS3 637 aa19.03■□□□□ 0.64
LINC00404-201ENST00000418660 CMTR1Q8N1G2 835 aaKnown RBP19.03■□□□□ 0.64
LINC00404-201ENST00000418660 DDX41Q9UJV9 622 aaKnown RBP19.03■□□□□ 0.64
LINC00404-201ENST00000418660 HSPA4P34932 840 aa19.02■□□□□ 0.64
LINC00404-201ENST00000418660 ARHGAP1Q07960 439 aa19.02■□□□□ 0.64
LINC00404-201ENST00000418660 C9orf50Q5SZB4 431 aa19.02■□□□□ 0.64
LINC00404-201ENST00000418660 MFSD5Q6N075 450 aa19.02■□□□□ 0.64
LINC00404-201ENST00000418660 APOA5Q6Q788 366 aa19.02■□□□□ 0.64
LINC00404-201ENST00000418660 TMTC3Q6ZXV5 915 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms