RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 RGS22Q8NE09 1264 aa12.21□□□□□ -0.45
RFC1-203ENST00000418436 TRPV1Q8NER1 839 aa12.21□□□□□ -0.45
RFC1-203ENST00000418436 TINF2Q9BSI4 451 aa12.21□□□□□ -0.45
RFC1-203ENST00000418436 SPZ1Q9BXG8 430 aa12.21□□□□□ -0.45
RFC1-203ENST00000418436 CYP39A1Q9NYL5 469 aa12.21□□□□□ -0.45
RFC1-203ENST00000418436 SYNGAP1Q96PV0 1343 aa12.2□□□□□ -0.46
RFC1-203ENST00000418436 SOWAHBA6NEL2 793 aa12.2□□□□□ -0.46
RFC1-203ENST00000418436 PPP1R11O60927 126 aaPredicted RBP12.2□□□□□ -0.46
RFC1-203ENST00000418436 CYBAP13498 195 aa12.2□□□□□ -0.46
RFC1-203ENST00000418436 EN2P19622 333 aaPredicted RBP12.2□□□□□ -0.46
RFC1-203ENST00000418436 RXRAP19793 462 aa12.2□□□□□ -0.46
RFC1-203ENST00000418436 CCND3P30281 292 aaPredicted RBP12.2□□□□□ -0.46
RFC1-203ENST00000418436 EVCP57679 992 aa12.2□□□□□ -0.46
RFC1-203ENST00000418436 CNTN2Q02246 1040 aa12.2□□□□□ -0.46
RFC1-203ENST00000418436 USH1GQ495M9 461 aa12.2□□□□□ -0.46
RFC1-203ENST00000418436 SYNE3Q6ZMZ3 975 aa12.2□□□□□ -0.46
RFC1-203ENST00000418436 SRBD1Q8N5C6 995 aaKnown RBP12.2□□□□□ -0.46
RFC1-203ENST00000418436 U2AF1L4Q8WU68 220 aaKnown RBP12.2□□□□□ -0.46
RFC1-203ENST00000418436 SHISA4Q96DD7 197 aa12.2□□□□□ -0.46
RFC1-203ENST00000418436 DEFB118Q96PH6 123 aa12.2□□□□□ -0.46
RFC1-203ENST00000418436 PIGSQ96S52 555 aa12.2□□□□□ -0.46
RFC1-203ENST00000418436 AMNQ9BXJ7 453 aa12.2□□□□□ -0.46
RFC1-203ENST00000418436 NRBP1Q9UHY1 535 aa12.2□□□□□ -0.46
RFC1-203ENST00000418436 ASTN1O14525 1302 aa12.19□□□□□ -0.46
RFC1-203ENST00000418436 PNMA6FA0A0J9YX94 578 aa12.19□□□□□ -0.46
RFC1-203ENST00000418436 KLF18A0A0U1RQI7 1052 aa12.19□□□□□ -0.46
RFC1-203ENST00000418436 ZBTB43O43298 467 aa12.19□□□□□ -0.46
RFC1-203ENST00000418436 PLEKHA8P1O95397 391 aa12.19□□□□□ -0.46
RFC1-203ENST00000418436 SNAI1O95863 264 aaPredicted RBP12.19□□□□□ -0.46
RFC1-203ENST00000418436 GHRHRQ02643 423 aa12.19□□□□□ -0.46
RFC1-203ENST00000418436 BAATQ14032 418 aaPredicted RBP12.19□□□□□ -0.46
RFC1-203ENST00000418436 NSMFQ6X4W1 530 aa12.19□□□□□ -0.46
RFC1-203ENST00000418436 RNF207Q6ZRF8 634 aa12.19□□□□□ -0.46
RFC1-203ENST00000418436 TMTC3Q6ZXV5 915 aa12.19□□□□□ -0.46
RFC1-203ENST00000418436 MICU3Q86XE3 530 aa12.19□□□□□ -0.46
RFC1-203ENST00000418436 RAB11FIP4Q86YS3 637 aa12.19□□□□□ -0.46
RFC1-203ENST00000418436 CCDC144CPQ8IYA2 1237 aa12.19□□□□□ -0.46
RFC1-203ENST00000418436 BRF1Q92994 677 aa12.19□□□□□ -0.46
RFC1-203ENST00000418436 FAM217BQ9NTX9 383 aaPredicted RBP12.19□□□□□ -0.46
RFC1-203ENST00000418436 RBM28Q9NW13 759 aaKnown RBP12.19□□□□□ -0.46
RFC1-203ENST00000418436 MRPL11Q9Y3B7 192 aaKnown RBP12.19□□□□□ -0.46
RFC1-203ENST00000418436 CYP46A1Q9Y6A2 500 aa12.19□□□□□ -0.46
RFC1-203ENST00000418436 NID2Q14112 1375 aa12.18□□□□□ -0.46
RFC1-203ENST00000418436 LRRC37A2A6NM11 1700 aa12.18□□□□□ -0.46
RFC1-203ENST00000418436 LOC102724159A0A0B4J2E5 919 aa12.18□□□□□ -0.46
RFC1-203ENST00000418436 OPLAHO14841 1288 aa12.18□□□□□ -0.46
RFC1-203ENST00000418436 COL9A1P20849 921 aa12.18□□□□□ -0.46
RFC1-203ENST00000418436 RPS6P62753 249 aaKnown RBP12.18□□□□□ -0.46
RFC1-203ENST00000418436 FGD1P98174 961 aa12.18□□□□□ -0.46
RFC1-203ENST00000418436 APOBRQ0VD83 1088 aa12.18□□□□□ -0.46
RFC1-203ENST00000418436 FUT2Q10981 343 aa12.18□□□□□ -0.46
RFC1-203ENST00000418436 TRAF1Q13077 416 aa12.18□□□□□ -0.46
RFC1-203ENST00000418436 TOB2Q14106 344 aaPredicted RBP12.18□□□□□ -0.46
RFC1-203ENST00000418436 PPP2R5BQ15173 497 aa12.18□□□□□ -0.46
RFC1-203ENST00000418436 PWP2Q15269 919 aaKnown RBP12.18□□□□□ -0.46
RFC1-203ENST00000418436 PRAMEF19Q5SWL8 479 aa12.18□□□□□ -0.46
RFC1-203ENST00000418436 SLC30A10Q6XR72 485 aa12.18□□□□□ -0.46
RFC1-203ENST00000418436 HOMER1Q86YM7 354 aa12.18□□□□□ -0.46
RFC1-203ENST00000418436 MORC4Q8TE76 937 aa12.18□□□□□ -0.46
RFC1-203ENST00000418436 TBC1D5Q92609 795 aa12.18□□□□□ -0.46
RFC1-203ENST00000418436 ALDH8A1Q9H2A2 487 aaPredicted RBP12.18□□□□□ -0.46
RFC1-203ENST00000418436 OGDHLQ9ULD0 1010 aa12.18□□□□□ -0.46
RFC1-203ENST00000418436 PCDHA1Q9Y5I3 950 aa12.18□□□□□ -0.46
RFC1-203ENST00000418436 GTF3C3Q9Y5Q9 886 aa12.18□□□□□ -0.46
RFC1-203ENST00000418436 PTPDC1A2A3K4 754 aa12.17□□□□□ -0.46
RFC1-203ENST00000418436 ASB14A6NK59 587 aa12.17□□□□□ -0.46
RFC1-203ENST00000418436 SEPT4O43236 478 aa12.17□□□□□ -0.46
RFC1-203ENST00000418436 MSCO60682 206 aa12.17□□□□□ -0.46
RFC1-203ENST00000418436 ZNF865P0CJ78 1059 aaPredicted RBP12.17□□□□□ -0.46
RFC1-203ENST00000418436 CDC27P30260 824 aa12.17□□□□□ -0.46
RFC1-203ENST00000418436 NBR1Q14596 966 aa12.17□□□□□ -0.46
RFC1-203ENST00000418436 RTN1Q16799 776 aa12.17□□□□□ -0.46
RFC1-203ENST00000418436 ARMCX2Q7L311 632 aa12.17□□□□□ -0.46
RFC1-203ENST00000418436 UBE2Q1Q7Z7E8 422 aa12.17□□□□□ -0.46
RFC1-203ENST00000418436 MCF2L2Q86YR7 1114 aa12.17□□□□□ -0.46
RFC1-203ENST00000418436 CMTR1Q8N1G2 835 aaKnown RBP12.17□□□□□ -0.46
RFC1-203ENST00000418436 SAMD3Q8N6K7 520 aa12.17□□□□□ -0.46
RFC1-203ENST00000418436 RRP36Q96EU6 259 aaKnown RBP12.17□□□□□ -0.46
RFC1-203ENST00000418436 PURBQ96QR8 312 aaKnown RBP12.17□□□□□ -0.46
RFC1-203ENST00000418436 UPF3BQ9BZI7 483 aaKnown RBP12.17□□□□□ -0.46
RFC1-203ENST00000418436 KATNBL1Q9H079 304 aa12.17□□□□□ -0.46
RFC1-203ENST00000418436 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.17□□□□□ -0.46
RFC1-203ENST00000418436 MAP3K20Q9NYL2 800 aaKnown RBP12.17□□□□□ -0.46
RFC1-203ENST00000418436 ADD3Q9UEY8 706 aaKnown RBP12.17□□□□□ -0.46
RFC1-203ENST00000418436 DDX20Q9UHI6 824 aaKnown RBP12.17□□□□□ -0.46
RFC1-203ENST00000418436 CNTNAP5Q8WYK1 1306 aa12.16□□□□□ -0.46
RFC1-203ENST00000418436 GOLGA8AA7E2F4 631 aa12.16□□□□□ -0.46
RFC1-203ENST00000418436 GOLGA8BA8MQT2 603 aa12.16□□□□□ -0.46
RFC1-203ENST00000418436 BHMG1C9JSJ3 638 aaPredicted RBP12.16□□□□□ -0.46
RFC1-203ENST00000418436 TFRCP02786 760 aaKnown RBP12.16□□□□□ -0.46
RFC1-203ENST00000418436 CALML3P27482 149 aa12.16□□□□□ -0.46
RFC1-203ENST00000418436 PDIA3P30101 505 aaKnown RBP12.16□□□□□ -0.46
RFC1-203ENST00000418436 ALDH5A1P51649 535 aaPredicted RBP12.16□□□□□ -0.46
RFC1-203ENST00000418436 HSD17B4P51659 736 aa12.16□□□□□ -0.46
RFC1-203ENST00000418436 C6orf132Q5T0Z8 1188 aa12.16□□□□□ -0.46
RFC1-203ENST00000418436 ANKLE1Q8NAG6 615 aa12.16□□□□□ -0.46
RFC1-203ENST00000418436 DNERQ8NFT8 737 aa12.16□□□□□ -0.46
RFC1-203ENST00000418436 SYTL5Q8TDW5 730 aaPredicted RBP12.16□□□□□ -0.46
RFC1-203ENST00000418436 ABHD16BQ9H3Z7 469 aa12.16□□□□□ -0.46
RFC1-203ENST00000418436 PDRG1Q9NUG6 133 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms