RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 TRIM60Q495X7 471 aa15.1■□□□□ 0.01
HLA-DMB-258ENST00000418107 KIAA1755Q5JYT7 1200 aa15.1■□□□□ 0.01
HLA-DMB-258ENST00000418107 PRAMEF19Q5SWL8 479 aa15.1■□□□□ 0.01
HLA-DMB-258ENST00000418107 ATL3Q6DD88 541 aa15.1■□□□□ 0.01
HLA-DMB-258ENST00000418107 SHCBP1Q8NEM2 672 aa15.1■□□□□ 0.01
HLA-DMB-258ENST00000418107 RRP36Q96EU6 259 aaKnown RBP15.1■□□□□ 0.01
HLA-DMB-258ENST00000418107 ARHGEF10LQ9HCE6 1279 aa15.1■□□□□ 0.01
HLA-DMB-258ENST00000418107 VPS54Q9P1Q0 977 aa15.1■□□□□ 0.01
HLA-DMB-258ENST00000418107 SEC63Q9UGP8 760 aaKnown RBP15.1■□□□□ 0.01
HLA-DMB-258ENST00000418107 ZNF236Q9UL36 1845 aa15.09■□□□□ 0.01
HLA-DMB-258ENST00000418107 RLFQ13129 1914 aa15.09■□□□□ 0.01
HLA-DMB-258ENST00000418107 MBD3O95983 291 aa15.09■□□□□ 0.01
HLA-DMB-258ENST00000418107 MMP1P03956 469 aa15.09■□□□□ 0.01
HLA-DMB-258ENST00000418107 ADCYAP1R1P41586 468 aa15.09■□□□□ 0.01
HLA-DMB-258ENST00000418107 PLS1Q14651 629 aa15.09■□□□□ 0.01
HLA-DMB-258ENST00000418107 SLFN13Q68D06 897 aa15.09■□□□□ 0.01
HLA-DMB-258ENST00000418107 TMEM87AQ8NBN3 555 aa15.09■□□□□ 0.01
HLA-DMB-258ENST00000418107 BADQ92934 168 aa15.09■□□□□ 0.01
HLA-DMB-258ENST00000418107 MKL1Q969V6 931 aa15.09■□□□□ 0.01
HLA-DMB-258ENST00000418107 FERMT2Q96AC1 680 aa15.09■□□□□ 0.01
HLA-DMB-258ENST00000418107 CDX2Q99626 313 aaPredicted RBP15.09■□□□□ 0.01
HLA-DMB-258ENST00000418107 SPZ1Q9BXG8 430 aa15.09■□□□□ 0.01
HLA-DMB-258ENST00000418107 GZF1Q9H116 711 aaPredicted RBP15.09■□□□□ 0.01
HLA-DMB-258ENST00000418107 A0A0G2JMZ2 1700 aa15.08■□□□□ 0
HLA-DMB-258ENST00000418107 KIF28PB7ZC32 967 aa15.08■□□□□ 0
HLA-DMB-258ENST00000418107 SMARCA1P28370 1054 aa15.08■□□□□ 0
HLA-DMB-258ENST00000418107 KRT2P35908 639 aa15.08■□□□□ 0
HLA-DMB-258ENST00000418107 NLRP5P59047 1200 aa15.08■□□□□ 0
HLA-DMB-258ENST00000418107 SNX17Q15036 470 aa15.08■□□□□ 0
HLA-DMB-258ENST00000418107 PFKFB3Q16875 520 aaPredicted RBP15.08■□□□□ 0
HLA-DMB-258ENST00000418107 GPATCH4Q5T3I0 446 aaKnown RBP15.08■□□□□ 0
HLA-DMB-258ENST00000418107 RASGRP2Q7LDG7 609 aa15.08■□□□□ 0
HLA-DMB-258ENST00000418107 HEATR3Q7Z4Q2 680 aa15.08■□□□□ 0
HLA-DMB-258ENST00000418107 SH3RF1Q7Z6J0 888 aa15.08■□□□□ 0
HLA-DMB-258ENST00000418107 NCAPG2Q86XI2 1143 aa15.08■□□□□ 0
HLA-DMB-258ENST00000418107 HOMER1Q86YM7 354 aa15.08■□□□□ 0
HLA-DMB-258ENST00000418107 DIS3L2Q8IYB7 885 aaKnown RBP15.08■□□□□ 0
HLA-DMB-258ENST00000418107 DCAF4Q8WV16 495 aa15.08■□□□□ 0
HLA-DMB-258ENST00000418107 ATG4CQ96DT6 458 aa15.08■□□□□ 0
HLA-DMB-258ENST00000418107 UBA5Q9GZZ9 404 aa15.08■□□□□ 0
HLA-DMB-258ENST00000418107 CPVLQ9H3G5 476 aa15.08■□□□□ 0
HLA-DMB-258ENST00000418107 PDLIM7Q9NR12 457 aa15.08■□□□□ 0
HLA-DMB-258ENST00000418107 TRIM43BA6NCK2 446 aa15.07■□□□□ 0
HLA-DMB-258ENST00000418107 GADD45BO75293 160 aaPredicted RBP15.07■□□□□ 0
HLA-DMB-258ENST00000418107 FLOT1O75955 427 aa15.07■□□□□ 0
HLA-DMB-258ENST00000418107 DSG3P32926 999 aa15.07■□□□□ 0
HLA-DMB-258ENST00000418107 SLC1A4P43007 532 aa15.07■□□□□ 0
HLA-DMB-258ENST00000418107 ZNF543Q08ER8 600 aa15.07■□□□□ 0
HLA-DMB-258ENST00000418107 IKQ13123 557 aaPredicted RBP15.07■□□□□ 0
HLA-DMB-258ENST00000418107 LRRC41Q15345 812 aa15.07■□□□□ 0
HLA-DMB-258ENST00000418107 KLHL40Q2TBA0 621 aa15.07■□□□□ 0
HLA-DMB-258ENST00000418107 MYSM1Q5VVJ2 828 aa15.07■□□□□ 0
HLA-DMB-258ENST00000418107 SAMD1Q6SPF0 538 aaPredicted RBP15.07■□□□□ 0
HLA-DMB-258ENST00000418107 KCTD1Q719H9 257 aa15.07■□□□□ 0
HLA-DMB-258ENST00000418107 SPICE1Q8N0Z3 855 aa15.07■□□□□ 0
HLA-DMB-258ENST00000418107 MB21D1Q8N884 522 aa15.07■□□□□ 0
HLA-DMB-258ENST00000418107 LEO1Q8WVC0 666 aaPredicted RBP15.07■□□□□ 0
HLA-DMB-258ENST00000418107 TRIM43Q96BQ3 446 aaPredicted RBP15.07■□□□□ 0
HLA-DMB-258ENST00000418107 SEMA6BQ9H3T3 888 aa15.07■□□□□ 0
HLA-DMB-258ENST00000418107 MROH8Q9H579 483 aa15.07■□□□□ 0
HLA-DMB-258ENST00000418107 SLC5A4Q9NY91 659 aa15.07■□□□□ 0
HLA-DMB-258ENST00000418107 PRUNE2Q8WUY3 3088 aa15.07■□□□□ 0
HLA-DMB-258ENST00000418107 SPTBN5Q9NRC6 3674 aaKnown RBP15.06■□□□□ 0
HLA-DMB-258ENST00000418107 BTBD18B2RXH4 712 aa15.06■□□□□ 0
HLA-DMB-258ENST00000418107 CALML3P27482 149 aa15.06■□□□□ 0
HLA-DMB-258ENST00000418107 UBE2HP62256 183 aa15.06■□□□□ 0
HLA-DMB-258ENST00000418107 STK38Q15208 465 aa15.06■□□□□ 0
HLA-DMB-258ENST00000418107 SF3A1Q15459 793 aaKnown RBP15.06■□□□□ 0
HLA-DMB-258ENST00000418107 SIAH1Q8IUQ4 282 aa15.06■□□□□ 0
HLA-DMB-258ENST00000418107 ABRAQ8N0Z2 381 aa15.06■□□□□ 0
HLA-DMB-258ENST00000418107 CCDC148Q8NFR7 591 aa15.06■□□□□ 0
HLA-DMB-258ENST00000418107 MAFAQ8NHW3 353 aaPredicted RBP15.06■□□□□ 0
HLA-DMB-258ENST00000418107 CCDC12Q8WUD4 166 aaPredicted RBP15.06■□□□□ 0
HLA-DMB-258ENST00000418107 GPKOWQ92917 476 aaPredicted RBP eCLIP15.06■□□□□ 0
HLA-DMB-258ENST00000418107 MAML3Q96JK9 1138 aa15.06■□□□□ 0
HLA-DMB-258ENST00000418107 FOXP1Q9H334 677 aaPredicted RBP15.06■□□□□ 0
HLA-DMB-258ENST00000418107 SH2D4AQ9H788 454 aa15.06■□□□□ 0
HLA-DMB-258ENST00000418107 GOPCQ9HD26 462 aa15.06■□□□□ 0
HLA-DMB-258ENST00000418107 SH3GLB2Q9NR46 395 aa15.06■□□□□ 0
HLA-DMB-258ENST00000418107 F5H6K3 240 aa15.05■□□□□ -0
HLA-DMB-258ENST00000418107 CYTH3O43739 400 aa15.05■□□□□ -0
HLA-DMB-258ENST00000418107 SNHG28P0DPA3 235 aa15.05■□□□□ -0
HLA-DMB-258ENST00000418107 U2AF2P26368 475 aaKnown RBP eCLIP15.05■□□□□ -0
HLA-DMB-258ENST00000418107 TLE2Q04725 743 aa15.05■□□□□ -0
HLA-DMB-258ENST00000418107 KLRC3Q07444 240 aa15.05■□□□□ -0
HLA-DMB-258ENST00000418107 NOSTRINQ8IVI9 506 aa15.05■□□□□ -0
HLA-DMB-258ENST00000418107 MYLIPQ8WY64 445 aa15.05■□□□□ -0
HLA-DMB-258ENST00000418107 USP28Q96RU2 1077 aa15.05■□□□□ -0
HLA-DMB-258ENST00000418107 PIGSQ96S52 555 aa15.05■□□□□ -0
HLA-DMB-258ENST00000418107 PHF20Q9BVI0 1012 aa15.05■□□□□ -0
HLA-DMB-258ENST00000418107 TTYH1Q9H313 450 aaPredicted RBP15.05■□□□□ -0
HLA-DMB-258ENST00000418107 ELP1O95163 1332 aa15.04■□□□□ -0
HLA-DMB-258ENST00000418107 FCER1AP12319 257 aa15.04■□□□□ -0
HLA-DMB-258ENST00000418107 ITGB8P26012 769 aa15.04■□□□□ -0
HLA-DMB-258ENST00000418107 NAPAP54920 295 aa15.04■□□□□ -0
HLA-DMB-258ENST00000418107 SMAD3P84022 425 aaKnown RBP15.04■□□□□ -0
HLA-DMB-258ENST00000418107 TMEM132BQ14DG7 1078 aa15.04■□□□□ -0
HLA-DMB-258ENST00000418107 TTBK2Q6IQ55 1244 aa15.04■□□□□ -0
HLA-DMB-258ENST00000418107 CAVIN1Q6NZI2 390 aaKnown RBP15.04■□□□□ -0
HLA-DMB-258ENST00000418107 GMCL1P1Q8NEA9 526 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms