RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 FOXD4L4Q8WXT5 416 aaPredicted RBP9.67□□□□□ -0.86
TRIM48-201ENST00000417545 DCBLD2Q96PD2 775 aa9.67□□□□□ -0.86
TRIM48-201ENST00000417545 RMDN3Q96TC7 470 aa9.67□□□□□ -0.86
TRIM48-201ENST00000417545 APBA2Q99767 749 aa9.67□□□□□ -0.86
TRIM48-201ENST00000417545 ANO3Q9BYT9 981 aa9.67□□□□□ -0.86
TRIM48-201ENST00000417545 GJB4Q9NTQ9 266 aa9.67□□□□□ -0.86
TRIM48-201ENST00000417545 PCDHA6Q9UN73 950 aa9.67□□□□□ -0.86
TRIM48-201ENST00000417545 TRIM17Q9Y577 477 aa9.67□□□□□ -0.86
TRIM48-201ENST00000417545 PCDHA8Q9Y5H6 950 aa9.67□□□□□ -0.86
TRIM48-201ENST00000417545 PIK3CDO00329 1044 aa9.66□□□□□ -0.86
TRIM48-201ENST00000417545 FOXN1O15353 648 aa9.66□□□□□ -0.86
TRIM48-201ENST00000417545 MYCLP12524 364 aaPredicted RBP9.66□□□□□ -0.86
TRIM48-201ENST00000417545 EIF2AK2P19525 551 aaKnown RBP9.66□□□□□ -0.86
TRIM48-201ENST00000417545 CYP2B6P20813 491 aa9.66□□□□□ -0.86
TRIM48-201ENST00000417545 HSD17B4P51659 736 aa9.66□□□□□ -0.86
TRIM48-201ENST00000417545 PRMT2P55345 433 aa9.66□□□□□ -0.86
TRIM48-201ENST00000417545 MAP2K5Q13163 448 aa9.66□□□□□ -0.86
TRIM48-201ENST00000417545 GRB14Q14449 540 aa9.66□□□□□ -0.86
TRIM48-201ENST00000417545 PIK3AP1Q6ZUJ8 805 aa9.66□□□□□ -0.86
TRIM48-201ENST00000417545 DNERQ8NFT8 737 aa9.66□□□□□ -0.86
TRIM48-201ENST00000417545 SYTL5Q8TDW5 730 aaPredicted RBP9.66□□□□□ -0.86
TRIM48-201ENST00000417545 TBC1D5Q92609 795 aa9.66□□□□□ -0.86
TRIM48-201ENST00000417545 PGBD1Q96JS3 809 aa9.66□□□□□ -0.86
TRIM48-201ENST00000417545 TRIM47Q96LD4 638 aa9.66□□□□□ -0.86
TRIM48-201ENST00000417545 ARHGAP39Q9C0H5 1083 aa9.66□□□□□ -0.86
TRIM48-201ENST00000417545 FOXP1Q9H334 677 aaPredicted RBP9.66□□□□□ -0.86
TRIM48-201ENST00000417545 TMEM260Q9NX78 707 aa9.66□□□□□ -0.86
TRIM48-201ENST00000417545 CASP8AP2Q9UKL3 1982 aa9.66□□□□□ -0.86
TRIM48-201ENST00000417545 ASB14A6NK59 587 aa9.65□□□□□ -0.86
TRIM48-201ENST00000417545 BTBD18B2RXH4 712 aa9.65□□□□□ -0.86
TRIM48-201ENST00000417545 MARCH6O60337 910 aa9.65□□□□□ -0.86
TRIM48-201ENST00000417545 HSPA8P11142 646 aaKnown RBP9.65□□□□□ -0.86
TRIM48-201ENST00000417545 ATP2B1P20020 1258 aa9.65□□□□□ -0.86
TRIM48-201ENST00000417545 CCND2P30279 289 aa9.65□□□□□ -0.86
TRIM48-201ENST00000417545 ALDH5A1P51649 535 aaPredicted RBP9.65□□□□□ -0.86
TRIM48-201ENST00000417545 LBX1P52954 281 aa9.65□□□□□ -0.86
TRIM48-201ENST00000417545 UBXN2AP68543 259 aa9.65□□□□□ -0.86
TRIM48-201ENST00000417545 NUCB2P80303 420 aa9.65□□□□□ -0.86
TRIM48-201ENST00000417545 CNTN2Q02246 1040 aa9.65□□□□□ -0.86
TRIM48-201ENST00000417545 NR5A1Q13285 461 aa9.65□□□□□ -0.86
TRIM48-201ENST00000417545 FERMT3Q86UX7 667 aa9.65□□□□□ -0.86
TRIM48-201ENST00000417545 TRMT44Q8IYL2 757 aaKnown RBP9.65□□□□□ -0.86
TRIM48-201ENST00000417545 TAAR1Q96RJ0 339 aa9.65□□□□□ -0.86
TRIM48-201ENST00000417545 NAP1L4Q99733 375 aaKnown RBP9.65□□□□□ -0.86
TRIM48-201ENST00000417545 MYH15Q9Y2K3 1946 aa9.65□□□□□ -0.86
TRIM48-201ENST00000417545 MEIS2O14770 477 aa9.65□□□□□ -0.87
TRIM48-201ENST00000417545 OPLAHO14841 1288 aa9.65□□□□□ -0.87
TRIM48-201ENST00000417545 ZSCAN22P10073 491 aaPredicted RBP9.65□□□□□ -0.87
TRIM48-201ENST00000417545 FLT3LGP49771 235 aa9.65□□□□□ -0.87
TRIM48-201ENST00000417545 PRKCZQ05513 592 aa9.65□□□□□ -0.87
TRIM48-201ENST00000417545 STXBP2Q15833 593 aa9.65□□□□□ -0.87
TRIM48-201ENST00000417545 INF2Q27J81 1249 aa9.65□□□□□ -0.87
TRIM48-201ENST00000417545 GNPTABQ3T906 1256 aa9.65□□□□□ -0.87
TRIM48-201ENST00000417545 MORN1Q5T089 497 aa9.65□□□□□ -0.87
TRIM48-201ENST00000417545 MFSD14CQ5VZR4 134 aa9.65□□□□□ -0.87
TRIM48-201ENST00000417545 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.65□□□□□ -0.87
TRIM48-201ENST00000417545 BRAPQ7Z569 592 aa9.65□□□□□ -0.87
TRIM48-201ENST00000417545 NOSTRINQ8IVI9 506 aa9.65□□□□□ -0.87
TRIM48-201ENST00000417545 OXER1Q8TDS5 423 aa9.65□□□□□ -0.87
TRIM48-201ENST00000417545 ZSCAN16Q9H4T2 348 aaPredicted RBP9.65□□□□□ -0.87
TRIM48-201ENST00000417545 PXMP2Q9NR77 195 aa9.65□□□□□ -0.87
TRIM48-201ENST00000417545 SRRDQ9UH36 339 aa9.65□□□□□ -0.87
TRIM48-201ENST00000417545 TCEAL9Q9UHQ7 104 aa9.65□□□□□ -0.87
TRIM48-201ENST00000417545 CNPY2Q9Y2B0 182 aa9.65□□□□□ -0.87
TRIM48-201ENST00000417545 ATP6V1DQ9Y5K8 247 aa9.65□□□□□ -0.87
TRIM48-201ENST00000417545 MYH7BA7E2Y1 1941 aa9.64□□□□□ -0.87
TRIM48-201ENST00000417545 LCTP09848 1927 aa9.64□□□□□ -0.87
TRIM48-201ENST00000417545 NCLP19338 710 aaKnown RBP9.64□□□□□ -0.87
TRIM48-201ENST00000417545 CLK2P49760 499 aaKnown RBP9.64□□□□□ -0.87
TRIM48-201ENST00000417545 CLCN6P51797 869 aa9.64□□□□□ -0.87
TRIM48-201ENST00000417545 ARHGAP4P98171 946 aa9.64□□□□□ -0.87
TRIM48-201ENST00000417545 GHRHRQ02643 423 aa9.64□□□□□ -0.87
TRIM48-201ENST00000417545 PGM5Q15124 567 aa9.64□□□□□ -0.87
TRIM48-201ENST00000417545 LETM2Q2VYF4 491 aa9.64□□□□□ -0.87
TRIM48-201ENST00000417545 ZNF792Q3KQV3 632 aa9.64□□□□□ -0.87
TRIM48-201ENST00000417545 NEK8Q86SG6 692 aa9.64□□□□□ -0.87
TRIM48-201ENST00000417545 NLRX1Q86UT6 975 aa9.64□□□□□ -0.87
TRIM48-201ENST00000417545 FAM133AQ8N9E0 248 aa9.64□□□□□ -0.87
TRIM48-201ENST00000417545 TBCKQ8TEA7 893 aa9.64□□□□□ -0.87
TRIM48-201ENST00000417545 MAML3Q96JK9 1138 aa9.64□□□□□ -0.87
TRIM48-201ENST00000417545 PURBQ96QR8 312 aaKnown RBP9.64□□□□□ -0.87
TRIM48-201ENST00000417545 IWS1Q96ST2 819 aa9.64□□□□□ -0.87
TRIM48-201ENST00000417545 CHMP5Q9NZZ3 219 aa9.64□□□□□ -0.87
TRIM48-201ENST00000417545 COL20A1Q9P218 1284 aa9.64□□□□□ -0.87
TRIM48-201ENST00000417545 ZHX1Q9UKY1 873 aaPredicted RBP9.64□□□□□ -0.87
TRIM48-201ENST00000417545 CIZ1Q9ULV3 898 aaPredicted RBP9.64□□□□□ -0.87
TRIM48-201ENST00000417545 GABRQQ9UN88 632 aa9.64□□□□□ -0.87
TRIM48-201ENST00000417545 MTMR6Q9Y217 621 aa9.64□□□□□ -0.87
TRIM48-201ENST00000417545 DIS3Q9Y2L1 958 aaKnown RBP9.64□□□□□ -0.87
TRIM48-201ENST00000417545 DOCK3Q8IZD9 2030 aa9.63□□□□□ -0.87
TRIM48-201ENST00000417545 DNAJC25-GNG10A0A024R161 153 aa9.63□□□□□ -0.87
TRIM48-201ENST00000417545 LOC102724159A0A0B4J2E5 919 aa9.63□□□□□ -0.87
TRIM48-201ENST00000417545 SOWAHBA6NEL2 793 aa9.63□□□□□ -0.87
TRIM48-201ENST00000417545 ADCY3O60266 1144 aa9.63□□□□□ -0.87
TRIM48-201ENST00000417545 CCNT1O60563 726 aaKnown RBP9.63□□□□□ -0.87
TRIM48-201ENST00000417545 COBLO75128 1261 aa9.63□□□□□ -0.87
TRIM48-201ENST00000417545 STAM2O75886 525 aa9.63□□□□□ -0.87
TRIM48-201ENST00000417545 F13A1P00488 732 aa9.63□□□□□ -0.87
TRIM48-201ENST00000417545 NR3C2P08235 984 aa9.63□□□□□ -0.87
TRIM48-201ENST00000417545 CTGFP29279 349 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms