RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 TELO2Q9Y4R8 837 aa11.87□□□□□ -0.51
HDLBP-206ENST00000417540 CHD9Q3L8U1 2897 aa11.87□□□□□ -0.51
HDLBP-206ENST00000417540 KLF18A0A0U1RQI7 1052 aa11.86□□□□□ -0.51
HDLBP-206ENST00000417540 TRIM43BA6NCK2 446 aa11.86□□□□□ -0.51
HDLBP-206ENST00000417540 GOLGA8AA7E2F4 631 aa11.86□□□□□ -0.51
HDLBP-206ENST00000417540 ASGR1P07306 291 aa11.86□□□□□ -0.51
HDLBP-206ENST00000417540 CDC27P30260 824 aa11.86□□□□□ -0.51
HDLBP-206ENST00000417540 GHRHRQ02643 423 aa11.86□□□□□ -0.51
HDLBP-206ENST00000417540 TNFAIP2Q03169 654 aa11.86□□□□□ -0.51
HDLBP-206ENST00000417540 PDE4DQ08499 809 aa11.86□□□□□ -0.51
HDLBP-206ENST00000417540 CXCL17Q6UXB2 119 aa11.86□□□□□ -0.51
HDLBP-206ENST00000417540 NOL8Q76FK4 1167 aaKnown RBP11.86□□□□□ -0.51
HDLBP-206ENST00000417540 RNF180Q86T96 592 aa11.86□□□□□ -0.51
HDLBP-206ENST00000417540 SGMS1Q86VZ5 419 aa11.86□□□□□ -0.51
HDLBP-206ENST00000417540 CTCFLQ8NI51 663 aaPredicted RBP11.86□□□□□ -0.51
HDLBP-206ENST00000417540 TRIM43Q96BQ3 446 aaPredicted RBP11.86□□□□□ -0.51
HDLBP-206ENST00000417540 LARP6Q9BRS8 491 aaKnown RBP11.86□□□□□ -0.51
HDLBP-206ENST00000417540 SPZ1Q9BXG8 430 aa11.86□□□□□ -0.51
HDLBP-206ENST00000417540 AMNQ9BXJ7 453 aa11.86□□□□□ -0.51
HDLBP-206ENST00000417540 PCDHA1Q9Y5I3 950 aa11.86□□□□□ -0.51
HDLBP-206ENST00000417540 NID2Q14112 1375 aa11.86□□□□□ -0.51
HDLBP-206ENST00000417540 GRIN2DO15399 1336 aa11.86□□□□□ -0.51
HDLBP-206ENST00000417540 FRMPD4Q14CM0 1322 aa11.86□□□□□ -0.51
HDLBP-206ENST00000417540 UMODL1Q5DID0 1318 aa11.86□□□□□ -0.51
HDLBP-206ENST00000417540 TRIP12Q14669 1992 aaPredicted RBP11.85□□□□□ -0.51
HDLBP-206ENST00000417540 RGS20O76081 388 aa11.85□□□□□ -0.51
HDLBP-206ENST00000417540 FUT2Q10981 343 aa11.85□□□□□ -0.51
HDLBP-206ENST00000417540 PPP2R5BQ15173 497 aa11.85□□□□□ -0.51
HDLBP-206ENST00000417540 FSCN1Q16658 493 aaKnown RBP11.85□□□□□ -0.51
HDLBP-206ENST00000417540 WWC2Q6AWC2 1192 aa11.85□□□□□ -0.51
HDLBP-206ENST00000417540 Q6ZUG5 572 aa11.85□□□□□ -0.51
HDLBP-206ENST00000417540 ARRDC4Q8NCT1 418 aa11.85□□□□□ -0.51
HDLBP-206ENST00000417540 OR6J1Q8NGC5 347 aa11.85□□□□□ -0.51
HDLBP-206ENST00000417540 PGBD1Q96JS3 809 aa11.85□□□□□ -0.51
HDLBP-206ENST00000417540 GDF15Q99988 308 aa11.85□□□□□ -0.51
HDLBP-206ENST00000417540 UPF3BQ9BZI7 483 aaKnown RBP11.85□□□□□ -0.51
HDLBP-206ENST00000417540 STARD7Q9NQZ5 370 aa11.85□□□□□ -0.51
HDLBP-206ENST00000417540 FAM217BQ9NTX9 383 aaPredicted RBP11.85□□□□□ -0.51
HDLBP-206ENST00000417540 MRPL11Q9Y3B7 192 aaKnown RBP11.85□□□□□ -0.51
HDLBP-206ENST00000417540 DYNC1LI2O43237 492 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-206ENST00000417540 CASTP20810 708 aaKnown RBP11.84□□□□□ -0.51
HDLBP-206ENST00000417540 RPS6KB1P23443 525 aa11.84□□□□□ -0.51
HDLBP-206ENST00000417540 LIFRP42702 1097 aa11.84□□□□□ -0.51
HDLBP-206ENST00000417540 TLE2Q04725 743 aa11.84□□□□□ -0.51
HDLBP-206ENST00000417540 SEMA3FQ13275 785 aa11.84□□□□□ -0.51
HDLBP-206ENST00000417540 RTN1Q16799 776 aa11.84□□□□□ -0.51
HDLBP-206ENST00000417540 LY6KQ17RY6 165 aa11.84□□□□□ -0.51
HDLBP-206ENST00000417540 RNF20Q5VTR2 975 aa11.84□□□□□ -0.51
HDLBP-206ENST00000417540 USP17L6PQ6QN14 398 aa11.84□□□□□ -0.51
HDLBP-206ENST00000417540 SEPT14Q6ZU15 432 aa11.84□□□□□ -0.51
HDLBP-206ENST00000417540 FCHSD1Q86WN1 690 aa11.84□□□□□ -0.51
HDLBP-206ENST00000417540 SLC17A8Q8NDX2 589 aa11.84□□□□□ -0.51
HDLBP-206ENST00000417540 BRF1Q92994 677 aa11.84□□□□□ -0.51
HDLBP-206ENST00000417540 LRCH3Q96II8 777 aa11.84□□□□□ -0.51
HDLBP-206ENST00000417540 RMDN3Q96TC7 470 aa11.84□□□□□ -0.51
HDLBP-206ENST00000417540 PDCD2LQ9BRP1 358 aa11.84□□□□□ -0.51
HDLBP-206ENST00000417540 WDR11Q9BZH6 1224 aa11.84□□□□□ -0.51
HDLBP-206ENST00000417540 ADD3Q9UEY8 706 aaKnown RBP11.84□□□□□ -0.51
HDLBP-206ENST00000417540 NAP1L2Q9ULW6 460 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-206ENST00000417540 NR2E3Q9Y5X4 410 aa11.84□□□□□ -0.51
HDLBP-206ENST00000417540 SLC12A7Q9Y666 1083 aa11.84□□□□□ -0.51
HDLBP-206ENST00000417540 PNMA6FA0A0J9YX94 578 aa11.83□□□□□ -0.52
HDLBP-206ENST00000417540 RBM47A0AV96 593 aaKnown RBP11.83□□□□□ -0.52
HDLBP-206ENST00000417540 ZBTB43O43298 467 aa11.83□□□□□ -0.52
HDLBP-206ENST00000417540 MYCLP12524 364 aaPredicted RBP11.83□□□□□ -0.52
HDLBP-206ENST00000417540 EPHB4P54760 987 aa11.83□□□□□ -0.52
HDLBP-206ENST00000417540 ARHGAP1Q07960 439 aa11.83□□□□□ -0.52
HDLBP-206ENST00000417540 TOB2Q14106 344 aaPredicted RBP11.83□□□□□ -0.52
HDLBP-206ENST00000417540 PGM5Q15124 567 aa11.83□□□□□ -0.52
HDLBP-206ENST00000417540 TSGA10IPQ3SY00 556 aa11.83□□□□□ -0.52
HDLBP-206ENST00000417540 DUSP28Q4G0W2 176 aa11.83□□□□□ -0.52
HDLBP-206ENST00000417540 ARHGEF16Q5VV41 709 aa11.83□□□□□ -0.52
HDLBP-206ENST00000417540 DHX32Q7L7V1 743 aaKnown RBP11.83□□□□□ -0.52
HDLBP-206ENST00000417540 HEATR3Q7Z4Q2 680 aa11.83□□□□□ -0.52
HDLBP-206ENST00000417540 DNERQ8NFT8 737 aa11.83□□□□□ -0.52
HDLBP-206ENST00000417540 BCAS3Q9H6U6 928 aa11.83□□□□□ -0.52
HDLBP-206ENST00000417540 NCOA5Q9HCD5 579 aaKnown RBP11.83□□□□□ -0.52
HDLBP-206ENST00000417540 WDR81Q562E7 1941 aa11.83□□□□□ -0.52
HDLBP-206ENST00000417540 COL4A4P53420 1690 aaPredicted RBP11.82□□□□□ -0.52
HDLBP-206ENST00000417540 MOXD2PA6NHM9 499 aa11.82□□□□□ -0.52
HDLBP-206ENST00000417540 MEIS2O14770 477 aa11.82□□□□□ -0.52
HDLBP-206ENST00000417540 SEC24BO95487 1268 aa11.82□□□□□ -0.52
HDLBP-206ENST00000417540 MMP3P08254 477 aa11.82□□□□□ -0.52
HDLBP-206ENST00000417540 MYL3P08590 195 aa11.82□□□□□ -0.52
HDLBP-206ENST00000417540 CLTBP09497 229 aa11.82□□□□□ -0.52
HDLBP-206ENST00000417540 ZNF286BP0CG31 522 aa11.82□□□□□ -0.52
HDLBP-206ENST00000417540 UBA1P22314 1058 aaKnown RBP11.82□□□□□ -0.52
HDLBP-206ENST00000417540 NKX3-2P78367 333 aa11.82□□□□□ -0.52
HDLBP-206ENST00000417540 MRPS9P82933 396 aaKnown RBP11.82□□□□□ -0.52
HDLBP-206ENST00000417540 FAAP100Q0VG06 881 aa11.82□□□□□ -0.52
HDLBP-206ENST00000417540 GNASQ5JWF2 1037 aa11.82□□□□□ -0.52
HDLBP-206ENST00000417540 C9orf50Q5SZB4 431 aa11.82□□□□□ -0.52
HDLBP-206ENST00000417540 CCDC62Q6P9F0 684 aa11.82□□□□□ -0.52
HDLBP-206ENST00000417540 BLOC1S2Q6QNY1 142 aa11.82□□□□□ -0.52
HDLBP-206ENST00000417540 FAM126BQ8IXS8 530 aa11.82□□□□□ -0.52
HDLBP-206ENST00000417540 BADQ92934 168 aa11.82□□□□□ -0.52
HDLBP-206ENST00000417540 RRP36Q96EU6 259 aaKnown RBP11.82□□□□□ -0.52
HDLBP-206ENST00000417540 MTA3Q9BTC8 594 aa11.82□□□□□ -0.52
HDLBP-206ENST00000417540 PPP1R12CQ9BZL4 782 aa11.82□□□□□ -0.52
HDLBP-206ENST00000417540 TBX21Q9UL17 535 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms