RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 FANCCQ00597 558 aa21.66■■□□□ 1.06
RAB3IP-205ENST00000417413 GRB10Q13322 594 aa21.66■■□□□ 1.06
RAB3IP-205ENST00000417413 DCAF15Q66K64 600 aa21.66■■□□□ 1.06
RAB3IP-205ENST00000417413 CCDC186Q7Z3E2 898 aa21.66■■□□□ 1.06
RAB3IP-205ENST00000417413 PNMA5Q96PV4 448 aa21.66■■□□□ 1.06
RAB3IP-205ENST00000417413 XPO4Q9C0E2 1151 aaKnown RBP21.66■■□□□ 1.06
RAB3IP-205ENST00000417413 IFNKQ9P0W0 207 aa21.66■■□□□ 1.06
RAB3IP-205ENST00000417413 PHIPQ8WWQ0 1821 aa21.65■■□□□ 1.06
RAB3IP-205ENST00000417413 WDR46O15213 610 aaKnown RBP21.65■■□□□ 1.06
RAB3IP-205ENST00000417413 PTGS1P23219 599 aa21.65■■□□□ 1.06
RAB3IP-205ENST00000417413 CCDC144BQ3MJ40 725 aa21.65■■□□□ 1.06
RAB3IP-205ENST00000417413 USP50Q70EL3 339 aaPredicted RBP21.65■■□□□ 1.06
RAB3IP-205ENST00000417413 LPAR1Q92633 364 aa21.65■■□□□ 1.06
RAB3IP-205ENST00000417413 CALML4Q96GE6 196 aa21.65■■□□□ 1.06
RAB3IP-205ENST00000417413 RAB34Q9BZG1 259 aa21.65■■□□□ 1.06
RAB3IP-205ENST00000417413 KCNMB3Q9NPA1 279 aa21.65■■□□□ 1.06
RAB3IP-205ENST00000417413 GGA3Q9NZ52 723 aa21.65■■□□□ 1.06
RAB3IP-205ENST00000417413 PARP14Q460N5 1801 aa21.65■■□□□ 1.06
RAB3IP-205ENST00000417413 SPDYE3A6NKU9 549 aa21.64■■□□□ 1.05
RAB3IP-205ENST00000417413 KLRC4O43908 158 aa21.64■■□□□ 1.05
RAB3IP-205ENST00000417413 TRMT44Q8IYL2 757 aaKnown RBP21.64■■□□□ 1.05
RAB3IP-205ENST00000417413 DCPSQ96C86 337 aaKnown RBP21.64■■□□□ 1.05
RAB3IP-205ENST00000417413 RMND1Q9NWS8 449 aa21.64■■□□□ 1.05
RAB3IP-205ENST00000417413 POTEMA6NI47 508 aa21.63■■□□□ 1.05
RAB3IP-205ENST00000417413 ZNF18P17022 549 aa21.63■■□□□ 1.05
RAB3IP-205ENST00000417413 HOXA13P31271 388 aaPredicted RBP21.63■■□□□ 1.05
RAB3IP-205ENST00000417413 Q4G0T1 1027 aa21.63■■□□□ 1.05
RAB3IP-205ENST00000417413 ZNF658Q5TYW1 1059 aaPredicted RBP21.63■■□□□ 1.05
RAB3IP-205ENST00000417413 SMYD4Q8IYR2 804 aaPredicted RBP21.63■■□□□ 1.05
RAB3IP-205ENST00000417413 NFE2L3Q9Y4A8 694 aa21.63■■□□□ 1.05
RAB3IP-205ENST00000417413 CYP3A4P08684 503 aa21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 CIITAP33076 1130 aa21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 SEMA3FQ13275 785 aa21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 KCNB1Q14721 858 aa21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 PRAMEF18Q5VWM3 479 aa21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 LDHDQ86WU2 507 aa21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 SCYL3Q8IZE3 742 aa21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 ZC3H15Q8WU90 426 aaKnown RBP21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 TBC1D5Q92609 795 aa21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 GJA10Q969M2 543 aa21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 NUDT12Q9BQG2 462 aa21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 BLOC1S4Q9NUP1 217 aa21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 PCDHA12Q9UN75 941 aa21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 MRPL11Q9Y3B7 192 aaKnown RBP21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 SRCAPQ6ZRS2 3230 aa21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 SUPT20HL1Q3ZLR7 823 aa21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 SULF1Q8IWU6 871 aa21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 LENG9Q96B70 501 aa21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 C7orf25Q9BPX7 421 aa21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 WDR18Q9BV38 432 aa21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 STK17AQ9UEE5 414 aa21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 ZNF536O15090 1300 aa21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 ABCB11O95342 1321 aa21.62■■□□□ 1.05
RAB3IP-205ENST00000417413 SSC5DA1L4H1 1573 aa21.61■■□□□ 1.05
RAB3IP-205ENST00000417413 EPHX2P34913 555 aa21.61■■□□□ 1.05
RAB3IP-205ENST00000417413 DGKZQ13574 1117 aa21.61■■□□□ 1.05
RAB3IP-205ENST00000417413 TMEM119Q4V9L6 283 aa21.61■■□□□ 1.05
RAB3IP-205ENST00000417413 SPATA1Q5VX52 437 aa21.61■■□□□ 1.05
RAB3IP-205ENST00000417413 PNMA8AQ86V59 439 aaPredicted RBP21.61■■□□□ 1.05
RAB3IP-205ENST00000417413 PRPF38AQ8NAV1 312 aaKnown RBP21.61■■□□□ 1.05
RAB3IP-205ENST00000417413 ETNPPLQ8TBG4 499 aa21.61■■□□□ 1.05
RAB3IP-205ENST00000417413 SLF1Q9BQI6 1058 aa21.61■■□□□ 1.05
RAB3IP-205ENST00000417413 EMILIN3Q9NT22 766 aa21.61■■□□□ 1.05
RAB3IP-205ENST00000417413 GCOM1H8Y6P7 765 aaPredicted RBP21.6■■□□□ 1.05
RAB3IP-205ENST00000417413 TBX3O15119 743 aa21.6■■□□□ 1.05
RAB3IP-205ENST00000417413 MARCH6O60337 910 aa21.6■■□□□ 1.05
RAB3IP-205ENST00000417413 RHOBTB3O94955 611 aa21.6■■□□□ 1.05
RAB3IP-205ENST00000417413 POLR2MP0CAP2 368 aa21.6■■□□□ 1.05
RAB3IP-205ENST00000417413 KMT5BQ4FZB7 885 aa21.6■■□□□ 1.05
RAB3IP-205ENST00000417413 KRT79Q5XKE5 535 aa21.6■■□□□ 1.05
RAB3IP-205ENST00000417413 SNX29Q8TEQ0 813 aa21.6■■□□□ 1.05
RAB3IP-205ENST00000417413 TRIM9Q9C026 710 aa21.6■■□□□ 1.05
RAB3IP-205ENST00000417413 SYNRGQ9UMZ2 1314 aa21.59■■□□□ 1.05
RAB3IP-205ENST00000417413 FAM86B1E9PN63 330 aa21.59■■□□□ 1.05
RAB3IP-205ENST00000417413 CFBP00751 764 aa21.59■■□□□ 1.05
RAB3IP-205ENST00000417413 ICAM1P05362 532 aa21.59■■□□□ 1.05
RAB3IP-205ENST00000417413 FAM86B2P0C5J1 330 aa21.59■■□□□ 1.05
RAB3IP-205ENST00000417413 MTMR2Q13614 643 aa21.59■■□□□ 1.05
RAB3IP-205ENST00000417413 HYIQ5T013 277 aa21.59■■□□□ 1.05
RAB3IP-205ENST00000417413 KLHL10Q6JEL2 608 aa21.59■■□□□ 1.05
RAB3IP-205ENST00000417413 SAMD1Q6SPF0 538 aaPredicted RBP21.59■■□□□ 1.05
RAB3IP-205ENST00000417413 FCHSD1Q86WN1 690 aa21.59■■□□□ 1.05
RAB3IP-205ENST00000417413 SLFN12Q8IYM2 578 aa21.59■■□□□ 1.05
RAB3IP-205ENST00000417413 ZKSCAN4Q969J2 545 aaPredicted RBP21.59■■□□□ 1.05
RAB3IP-205ENST00000417413 WRNIP1Q96S55 665 aa21.59■■□□□ 1.05
RAB3IP-205ENST00000417413 SAMSN1Q9NSI8 373 aaKnown RBP21.59■■□□□ 1.05
RAB3IP-205ENST00000417413 GDAQ9Y2T3 454 aa21.59■■□□□ 1.05
RAB3IP-205ENST00000417413 RLFQ13129 1914 aa21.59■■□□□ 1.05
RAB3IP-205ENST00000417413 SERPINC1P01008 464 aa21.58■■□□□ 1.05
RAB3IP-205ENST00000417413 PTPRAP18433 802 aa21.58■■□□□ 1.05
RAB3IP-205ENST00000417413 STX17P56962 302 aa21.58■■□□□ 1.05
RAB3IP-205ENST00000417413 UBASH3AP57075 661 aa21.58■■□□□ 1.05
RAB3IP-205ENST00000417413 ECM1Q16610 540 aa21.58■■□□□ 1.05
RAB3IP-205ENST00000417413 PRR16Q569H4 304 aa21.58■■□□□ 1.05
RAB3IP-205ENST00000417413 AGBL1Q96MI9 1066 aa21.58■■□□□ 1.05
RAB3IP-205ENST00000417413 IMPACTQ9P2X3 320 aa21.58■■□□□ 1.05
RAB3IP-205ENST00000417413 FZD1Q9UP38 647 aa21.58■■□□□ 1.05
RAB3IP-205ENST00000417413 RBBP6Q7Z6E9 1792 aaKnown RBP21.58■■□□□ 1.05
RAB3IP-205ENST00000417413 CBFA2T2O43439 604 aa21.58■■□□□ 1.04
RAB3IP-205ENST00000417413 SLC26A4O43511 780 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms