RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 ARHGEF16Q5VV41 709 aa18.12■□□□□ 0.49
ITGB1-204ENST00000417122 CXCL17Q6UXB2 119 aa18.12■□□□□ 0.49
ITGB1-204ENST00000417122 SCFD2Q8WU76 684 aa18.12■□□□□ 0.49
ITGB1-204ENST00000417122 NEK1Q96PY6 1258 aa18.12■□□□□ 0.49
ITGB1-204ENST00000417122 IWS1Q96ST2 819 aa18.12■□□□□ 0.49
ITGB1-204ENST00000417122 MAP3K20Q9NYL2 800 aaKnown RBP18.12■□□□□ 0.49
ITGB1-204ENST00000417122 MROH7Q68CQ1 1323 aa18.12■□□□□ 0.49
ITGB1-204ENST00000417122 ARVCFO00192 962 aa18.11■□□□□ 0.49
ITGB1-204ENST00000417122 NKRFO15226 690 aaKnown RBP eCLIP18.11■□□□□ 0.49
ITGB1-204ENST00000417122 CABYRO75952 493 aa18.11■□□□□ 0.49
ITGB1-204ENST00000417122 CALM1P0DP23 149 aa18.11■□□□□ 0.49
ITGB1-204ENST00000417122 CALM2P0DP24 149 aa18.11■□□□□ 0.49
ITGB1-204ENST00000417122 CALM3P0DP25 149 aa18.11■□□□□ 0.49
ITGB1-204ENST00000417122 CDK7P50613 346 aa18.11■□□□□ 0.49
ITGB1-204ENST00000417122 FAAP100Q0VG06 881 aa18.11■□□□□ 0.49
ITGB1-204ENST00000417122 TSGA10IPQ3SY00 556 aa18.11■□□□□ 0.49
ITGB1-204ENST00000417122 SAMD3Q8N6K7 520 aa18.11■□□□□ 0.49
ITGB1-204ENST00000417122 OR6J1Q8NGC5 347 aa18.11■□□□□ 0.49
ITGB1-204ENST00000417122 BADQ92934 168 aa18.11■□□□□ 0.49
ITGB1-204ENST00000417122 SPZ1Q9BXG8 430 aa18.11■□□□□ 0.49
ITGB1-204ENST00000417122 TMEM39AQ9NV64 488 aa18.11■□□□□ 0.49
ITGB1-204ENST00000417122 SLC12A7Q9Y666 1083 aa18.11■□□□□ 0.49
ITGB1-204ENST00000417122 KIAA1217Q5T5P2 1943 aa18.11■□□□□ 0.49
ITGB1-204ENST00000417122 TRIOBPQ9H2D6 2365 aa18.11■□□□□ 0.49
ITGB1-204ENST00000417122 KIAA0355O15063 1070 aa18.1■□□□□ 0.49
ITGB1-204ENST00000417122 TXNP10599 105 aaKnown RBP18.1■□□□□ 0.49
ITGB1-204ENST00000417122 EIF2AK2P19525 551 aaKnown RBP18.1■□□□□ 0.49
ITGB1-204ENST00000417122 RXRAP19793 462 aa18.1■□□□□ 0.49
ITGB1-204ENST00000417122 SMARCA1P28370 1054 aa18.1■□□□□ 0.49
ITGB1-204ENST00000417122 GNAQP50148 359 aa18.1■□□□□ 0.49
ITGB1-204ENST00000417122 TTLL4Q14679 1199 aa18.1■□□□□ 0.49
ITGB1-204ENST00000417122 STXBP2Q15833 593 aa18.1■□□□□ 0.49
ITGB1-204ENST00000417122 RASEFQ8IZ41 740 aa18.1■□□□□ 0.49
ITGB1-204ENST00000417122 PIBF1Q8WXW3 757 aa18.1■□□□□ 0.49
ITGB1-204ENST00000417122 LZTS2Q9BRK4 669 aa18.1■□□□□ 0.49
ITGB1-204ENST00000417122 PXMP2Q9NR77 195 aa18.1■□□□□ 0.49
ITGB1-204ENST00000417122 SOX1O00570 391 aaPredicted RBP18.09■□□□□ 0.49
ITGB1-204ENST00000417122 PLEKHA8P1O95397 391 aa18.09■□□□□ 0.49
ITGB1-204ENST00000417122 RAG1P15918 1043 aa18.09■□□□□ 0.49
ITGB1-204ENST00000417122 ITGB8P26012 769 aa18.09■□□□□ 0.49
ITGB1-204ENST00000417122 HOXA13P31271 388 aaPredicted RBP18.09■□□□□ 0.49
ITGB1-204ENST00000417122 CPT1AP50416 773 aa18.09■□□□□ 0.49
ITGB1-204ENST00000417122 KRT32Q14532 448 aa18.09■□□□□ 0.49
ITGB1-204ENST00000417122 ADCK5Q3MIX3 580 aa18.09■□□□□ 0.49
ITGB1-204ENST00000417122 SEPT14Q6ZU15 432 aa18.09■□□□□ 0.49
ITGB1-204ENST00000417122 SGMS1Q86VZ5 419 aa18.09■□□□□ 0.49
ITGB1-204ENST00000417122 RRP36Q96EU6 259 aaKnown RBP18.09■□□□□ 0.49
ITGB1-204ENST00000417122 GCOM1H8Y6P7 765 aaPredicted RBP18.08■□□□□ 0.48
ITGB1-204ENST00000417122 ARIH2O95376 493 aa18.08■□□□□ 0.48
ITGB1-204ENST00000417122 NR3C2P08235 984 aa18.08■□□□□ 0.48
ITGB1-204ENST00000417122 POLR2MP0CAP2 368 aa18.08■□□□□ 0.48
ITGB1-204ENST00000417122 EXOSC10Q01780 885 aaKnown RBP18.08■□□□□ 0.48
ITGB1-204ENST00000417122 ITGA7Q13683 1181 aa18.08■□□□□ 0.48
ITGB1-204ENST00000417122 LRIT3Q3SXY7 679 aa18.08■□□□□ 0.48
ITGB1-204ENST00000417122 DHX32Q7L7V1 743 aaKnown RBP18.08■□□□□ 0.48
ITGB1-204ENST00000417122 RAB11FIP4Q86YS3 637 aa18.08■□□□□ 0.48
ITGB1-204ENST00000417122 SRBD1Q8N5C6 995 aaKnown RBP18.08■□□□□ 0.48
ITGB1-204ENST00000417122 SLC43A3Q8NBI5 491 aa18.08■□□□□ 0.48
ITGB1-204ENST00000417122 COPS5Q92905 334 aa18.08■□□□□ 0.48
ITGB1-204ENST00000417122 POLR3EQ9NVU0 708 aa18.08■□□□□ 0.48
ITGB1-204ENST00000417122 SEC63Q9UGP8 760 aaKnown RBP18.08■□□□□ 0.48
ITGB1-204ENST00000417122 TLR3O15455 904 aaKnown RBP18.07■□□□□ 0.48
ITGB1-204ENST00000417122 EIF3JO75822 258 aaKnown RBP18.07■□□□□ 0.48
ITGB1-204ENST00000417122 MYL3P08590 195 aa18.07■□□□□ 0.48
ITGB1-204ENST00000417122 PURAQ00577 322 aaKnown RBP18.07■□□□□ 0.48
ITGB1-204ENST00000417122 BRDTQ58F21 947 aaPredicted RBP18.07■□□□□ 0.48
ITGB1-204ENST00000417122 CCDC62Q6P9F0 684 aa18.07■□□□□ 0.48
ITGB1-204ENST00000417122 SYNE3Q6ZMZ3 975 aa18.07■□□□□ 0.48
ITGB1-204ENST00000417122 MICU3Q86XE3 530 aa18.07■□□□□ 0.48
ITGB1-204ENST00000417122 FAM126BQ8IXS8 530 aa18.07■□□□□ 0.48
ITGB1-204ENST00000417122 CMTR1Q8N1G2 835 aaKnown RBP18.07■□□□□ 0.48
ITGB1-204ENST00000417122 FANCBQ8NB91 859 aa18.07■□□□□ 0.48
ITGB1-204ENST00000417122 LRCH3Q96II8 777 aa18.07■□□□□ 0.48
ITGB1-204ENST00000417122 TCEANC2Q96MN5 208 aa18.07■□□□□ 0.48
ITGB1-204ENST00000417122 PDCD2LQ9BRP1 358 aa18.07■□□□□ 0.48
ITGB1-204ENST00000417122 SEZ6LQ9BYH1 1024 aa18.07■□□□□ 0.48
ITGB1-204ENST00000417122 PPP4R2Q9NY27 417 aa18.07■□□□□ 0.48
ITGB1-204ENST00000417122 GRIN2DO15399 1336 aa18.06■□□□□ 0.48
ITGB1-204ENST00000417122 MYCLP12524 364 aaPredicted RBP18.06■□□□□ 0.48
ITGB1-204ENST00000417122 PSMC6P62333 389 aa18.06■□□□□ 0.48
ITGB1-204ENST00000417122 LY6KQ17RY6 165 aa18.06■□□□□ 0.48
ITGB1-204ENST00000417122 ERICH6BQ5W0A0 696 aa18.06■□□□□ 0.48
ITGB1-204ENST00000417122 FCHSD1Q86WN1 690 aa18.06■□□□□ 0.48
ITGB1-204ENST00000417122 KCNB2Q92953 911 aa18.06■□□□□ 0.48
ITGB1-204ENST00000417122 TBX21Q9UL17 535 aa18.06■□□□□ 0.48
ITGB1-204ENST00000417122 RANBP2P49792 3224 aaKnown RBP18.06■□□□□ 0.48
ITGB1-204ENST00000417122 A6NJR5 290 aa18.05■□□□□ 0.48
ITGB1-204ENST00000417122 REC8O95072 547 aa18.05■□□□□ 0.48
ITGB1-204ENST00000417122 TIMP1P01033 207 aa18.05■□□□□ 0.48
ITGB1-204ENST00000417122 CD4P01730 458 aa18.05■□□□□ 0.48
ITGB1-204ENST00000417122 HMGB1P09429 215 aaKnown RBP18.05■□□□□ 0.48
ITGB1-204ENST00000417122 HSPA4P34932 840 aa18.05■□□□□ 0.48
ITGB1-204ENST00000417122 PGM5Q15124 567 aa18.05■□□□□ 0.48
ITGB1-204ENST00000417122 APOA5Q6Q788 366 aa18.05■□□□□ 0.48
ITGB1-204ENST00000417122 TMTC3Q6ZXV5 915 aa18.05■□□□□ 0.48
ITGB1-204ENST00000417122 CCDC82Q8N4S0 544 aa18.05■□□□□ 0.48
ITGB1-204ENST00000417122 DDX41Q9UJV9 622 aaKnown RBP18.05■□□□□ 0.48
ITGB1-204ENST00000417122 MRVI1Q9Y6F6 885 aa18.05■□□□□ 0.48
ITGB1-204ENST00000417122 KPNA6O60684 536 aa18.04■□□□□ 0.48
ITGB1-204ENST00000417122 GH1P01241 217 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms