RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 YBX2Q9Y2T7 364 aaKnown RBP17.36■□□□□ 0.37
RPS28-201ENST00000417088 B4E1Z4 1266 aa17.35■□□□□ 0.37
RPS28-201ENST00000417088 ARIH2O95376 493 aa17.35■□□□□ 0.37
RPS28-201ENST00000417088 TXNP10599 105 aaKnown RBP17.35■□□□□ 0.37
RPS28-201ENST00000417088 ADGRE1Q14246 886 aa17.35■□□□□ 0.37
RPS28-201ENST00000417088 CDC37Q16543 378 aaPredicted RBP17.35■□□□□ 0.37
RPS28-201ENST00000417088 BRDTQ58F21 947 aaPredicted RBP17.35■□□□□ 0.37
RPS28-201ENST00000417088 ADGRF4Q8IZF3 695 aa17.35■□□□□ 0.37
RPS28-201ENST00000417088 PPP1R13LQ8WUF5 828 aa17.35■□□□□ 0.37
RPS28-201ENST00000417088 ZSCAN10Q96SZ4 725 aaPredicted RBP17.35■□□□□ 0.37
RPS28-201ENST00000417088 KAT14Q9H8E8 782 aa17.35■□□□□ 0.37
RPS28-201ENST00000417088 ZSWIM5Q9P217 1185 aa17.35■□□□□ 0.37
RPS28-201ENST00000417088 B4DLN1 442 aa17.34■□□□□ 0.37
RPS28-201ENST00000417088 KPNA6O60684 536 aa17.34■□□□□ 0.37
RPS28-201ENST00000417088 MRPL12P52815 198 aaKnown RBP17.34■□□□□ 0.37
RPS28-201ENST00000417088 FAM47CQ5HY64 1035 aa17.34■□□□□ 0.37
RPS28-201ENST00000417088 CCDC62Q6P9F0 684 aa17.34■□□□□ 0.37
RPS28-201ENST00000417088 ENAHQ8N8S7 591 aaPredicted RBP17.34■□□□□ 0.37
RPS28-201ENST00000417088 SYTL5Q8TDW5 730 aaPredicted RBP17.34■□□□□ 0.37
RPS28-201ENST00000417088 RAD50Q92878 1312 aa17.34■□□□□ 0.37
RPS28-201ENST00000417088 DSCC1Q9BVC3 393 aa17.34■□□□□ 0.37
RPS28-201ENST00000417088 MAF1Q9H063 256 aa17.34■□□□□ 0.37
RPS28-201ENST00000417088 SLC28A3Q9HAS3 691 aa17.34■□□□□ 0.37
RPS28-201ENST00000417088 PRDM6Q9NQX0 595 aa17.34■□□□□ 0.37
RPS28-201ENST00000417088 SCN10AQ9Y5Y9 1956 aa17.34■□□□□ 0.37
RPS28-201ENST00000417088 SLC4A7Q9Y6M7 1214 aa17.34■□□□□ 0.37
RPS28-201ENST00000417088 ABCB11O95342 1321 aa17.33■□□□□ 0.36
RPS28-201ENST00000417088 ZBBXA8MT70 800 aa17.33■□□□□ 0.36
RPS28-201ENST00000417088 HIP1O00291 1037 aa17.33■□□□□ 0.36
RPS28-201ENST00000417088 PFKMP08237 780 aa17.33■□□□□ 0.36
RPS28-201ENST00000417088 RABGGTBP53611 331 aa17.33■□□□□ 0.36
RPS28-201ENST00000417088 TTLL4Q14679 1199 aa17.33■□□□□ 0.36
RPS28-201ENST00000417088 NFRKBQ6P4R8 1299 aa17.33■□□□□ 0.36
RPS28-201ENST00000417088 EXOC6Q8TAG9 804 aa17.33■□□□□ 0.36
RPS28-201ENST00000417088 PPM1EQ8WY54 764 aa17.33■□□□□ 0.36
RPS28-201ENST00000417088 TAAR1Q96RJ0 339 aa17.33■□□□□ 0.36
RPS28-201ENST00000417088 COL20A1Q9P218 1284 aa17.33■□□□□ 0.36
RPS28-201ENST00000417088 PTPN11Q06124 597 aaPredicted RBP17.32■□□□□ 0.36
RPS28-201ENST00000417088 QRICH1Q2TAL8 776 aa17.32■□□□□ 0.36
RPS28-201ENST00000417088 ASPRV1Q53RT3 343 aa17.32■□□□□ 0.36
RPS28-201ENST00000417088 DEFB128Q7Z7B8 93 aa17.32■□□□□ 0.36
RPS28-201ENST00000417088 SYMPKQ92797 1274 aaKnown RBP17.32■□□□□ 0.36
RPS28-201ENST00000417088 LAMA4Q16363 1823 aa17.32■□□□□ 0.36
RPS28-201ENST00000417088 MYOGP15173 224 aa17.31■□□□□ 0.36
RPS28-201ENST00000417088 ATP2A2P16615 1042 aaKnown RBP17.31■□□□□ 0.36
RPS28-201ENST00000417088 IMMTQ16891 758 aaKnown RBP17.31■□□□□ 0.36
RPS28-201ENST00000417088 TJAP1Q5JTD0 557 aa17.31■□□□□ 0.36
RPS28-201ENST00000417088 MCF2L2Q86YR7 1114 aa17.31■□□□□ 0.36
RPS28-201ENST00000417088 NSUN6Q8TEA1 469 aaKnown RBP17.31■□□□□ 0.36
RPS28-201ENST00000417088 KRT23Q9C075 422 aa17.31■□□□□ 0.36
RPS28-201ENST00000417088 JMJD4Q9H9V9 463 aa17.31■□□□□ 0.36
RPS28-201ENST00000417088 VAT1LQ9HCJ6 419 aa17.31■□□□□ 0.36
RPS28-201ENST00000417088 CHD7Q9P2D1 2997 aa17.31■□□□□ 0.36
RPS28-201ENST00000417088 CTNNA3Q9UI47 895 aa17.31■□□□□ 0.36
RPS28-201ENST00000417088 PCDHA11Q9Y5I1 949 aa17.31■□□□□ 0.36
RPS28-201ENST00000417088 GBF1Q92538 1859 aa17.31■□□□□ 0.36
RPS28-201ENST00000417088 PITPNM1O00562 1244 aa17.3■□□□□ 0.36
RPS28-201ENST00000417088 DHX16O60231 1041 aaKnown RBP17.3■□□□□ 0.36
RPS28-201ENST00000417088 PARP1P09874 1014 aaKnown RBP17.3■□□□□ 0.36
RPS28-201ENST00000417088 IGFBP4P22692 258 aa17.3■□□□□ 0.36
RPS28-201ENST00000417088 LY6KQ17RY6 165 aa17.3■□□□□ 0.36
RPS28-201ENST00000417088 SEPT14Q6ZU15 432 aa17.3■□□□□ 0.36
RPS28-201ENST00000417088 FBXO11Q86XK2 927 aa17.3■□□□□ 0.36
RPS28-201ENST00000417088 AFG1LQ8WV93 481 aa17.3■□□□□ 0.36
RPS28-201ENST00000417088 YTHDC1Q96MU7 727 aaKnown RBP17.3■□□□□ 0.36
RPS28-201ENST00000417088 IWS1Q96ST2 819 aa17.3■□□□□ 0.36
RPS28-201ENST00000417088 RMDN3Q96TC7 470 aa17.3■□□□□ 0.36
RPS28-201ENST00000417088 IL25Q9H293 177 aa17.3■□□□□ 0.36
RPS28-201ENST00000417088 MRPL11Q9Y3B7 192 aaKnown RBP17.3■□□□□ 0.36
RPS28-201ENST00000417088 GH1P01241 217 aa17.29■□□□□ 0.36
RPS28-201ENST00000417088 MMP3P08254 477 aa17.29■□□□□ 0.36
RPS28-201ENST00000417088 IQCF3P0C7M6 154 aa17.29■□□□□ 0.36
RPS28-201ENST00000417088 RFC2P35250 354 aa17.29■□□□□ 0.36
RPS28-201ENST00000417088 ARHGAP1Q07960 439 aa17.29■□□□□ 0.36
RPS28-201ENST00000417088 STXBP2Q15833 593 aa17.29■□□□□ 0.36
RPS28-201ENST00000417088 CCDC85BQ15834 202 aaPredicted RBP17.29■□□□□ 0.36
RPS28-201ENST00000417088 PPP2R2DQ66LE6 453 aa17.29■□□□□ 0.36
RPS28-201ENST00000417088 RETREG2Q8NC44 543 aa17.29■□□□□ 0.36
RPS28-201ENST00000417088 UBAC1Q9BSL1 405 aa17.29■□□□□ 0.36
RPS28-201ENST00000417088 CNNM2Q9H8M5 875 aa17.29■□□□□ 0.36
RPS28-201ENST00000417088 SCN5AQ14524 2016 aa17.29■□□□□ 0.36
RPS28-201ENST00000417088 OPLAHO14841 1288 aa17.28■□□□□ 0.36
RPS28-201ENST00000417088 ACTN1P12814 892 aa17.28■□□□□ 0.36
RPS28-201ENST00000417088 EIF2AK2P19525 551 aaKnown RBP17.28■□□□□ 0.36
RPS28-201ENST00000417088 CHMP4BP1P59074 171 aa17.28■□□□□ 0.36
RPS28-201ENST00000417088 SEC23AQ15436 765 aa17.28■□□□□ 0.36
RPS28-201ENST00000417088 IFIT1BQ5T764 474 aaKnown RBP17.28■□□□□ 0.36
RPS28-201ENST00000417088 ARHGEF16Q5VV41 709 aa17.28■□□□□ 0.36
RPS28-201ENST00000417088 STAG2Q8N3U4 1231 aa17.28■□□□□ 0.36
RPS28-201ENST00000417088 ATXN2LQ8WWM7 1075 aaKnown RBP17.28■□□□□ 0.36
RPS28-201ENST00000417088 KAT2BQ92831 832 aa17.28■□□□□ 0.36
RPS28-201ENST00000417088 CTAGE1Q96RT6 745 aa17.28■□□□□ 0.36
RPS28-201ENST00000417088 NOD1Q9Y239 953 aa17.28■□□□□ 0.36
RPS28-201ENST00000417088 CFBP00751 764 aa17.27■□□□□ 0.36
RPS28-201ENST00000417088 NR3C2P08235 984 aa17.27■□□□□ 0.36
RPS28-201ENST00000417088 BFSP2Q13515 415 aa17.27■□□□□ 0.36
RPS28-201ENST00000417088 PTGISQ16647 500 aa17.27■□□□□ 0.36
RPS28-201ENST00000417088 TMEM67Q5HYA8 995 aa17.27■□□□□ 0.36
RPS28-201ENST00000417088 GDF6Q6KF10 455 aaPredicted RBP17.27■□□□□ 0.36
RPS28-201ENST00000417088 CYB5R4Q7L1T6 521 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms