RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 AENQ8WTP8 325 aaKnown RBP14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 RPGRQ92834 1020 aaKnown RBP14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 IQCDQ96DY2 449 aa14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 RASSF10A6NK89 507 aa14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 LAD1O00515 517 aa14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 SND1Q7KZF4 910 aaKnown RBP eCLIP14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 SEPT12Q8IYM1 358 aa14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 MMGT1Q8N4V1 131 aa14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 IFIH1Q9BYX4 1025 aaKnown RBP14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 MKNK2Q9HBH9 465 aa14.25□□□□□ -0.13
LRRTM1-205ENST00000417012 UFL1O94874 794 aa14.24□□□□□ -0.13
LRRTM1-205ENST00000417012 SKIDA1Q1XH10 827 aa14.24□□□□□ -0.13
LRRTM1-205ENST00000417012 INF2Q27J81 1249 aa14.24□□□□□ -0.13
LRRTM1-205ENST00000417012 PACS2Q86VP3 889 aa14.24□□□□□ -0.13
LRRTM1-205ENST00000417012 WDR66Q8TBY9 1149 aa14.24□□□□□ -0.13
LRRTM1-205ENST00000417012 ERGIC2Q96RQ1 377 aa14.24□□□□□ -0.13
LRRTM1-205ENST00000417012 TCP11L1Q9NUJ3 509 aa14.24□□□□□ -0.13
LRRTM1-205ENST00000417012 LEMD3Q9Y2U8 911 aa14.24□□□□□ -0.13
LRRTM1-205ENST00000417012 MAST2Q6P0Q8 1798 aa14.24□□□□□ -0.13
LRRTM1-205ENST00000417012 ASIC1P78348 528 aa14.24□□□□□ -0.13
LRRTM1-205ENST00000417012 ITIH3Q06033 890 aa14.24□□□□□ -0.13
LRRTM1-205ENST00000417012 ANKRD40Q6AI12 368 aa14.24□□□□□ -0.13
LRRTM1-205ENST00000417012 ALS2CR12Q96Q35 445 aa14.24□□□□□ -0.13
LRRTM1-205ENST00000417012 PLCG1P19174 1290 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 PPFIA1Q13136 1202 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 ZNF804AQ7Z570 1209 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 CABP7Q86V35 215 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 CREG2Q8IUH2 290 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 DRC1Q96MC2 740 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 DEF6Q9H4E7 631 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 GOLGA8KD6RF30 607 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 GYS1P13807 737 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 PRPHP41219 470 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 MIIPQ5JXC2 388 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 CCDC181Q5TID7 509 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 GBP6Q6ZN66 633 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 KRT26Q7Z3Y9 468 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 ZSCAN29Q8IWY8 852 aaPredicted RBP14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 PNMA1Q8ND90 353 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 SMCR8Q8TEV9 937 aaPredicted RBP14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 RUFY1Q96T51 708 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 TRIM9Q9C026 710 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 SH2D4AQ9H788 454 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 PCDHA6Q9UN73 950 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 PCDHA8Q9Y5H6 950 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 CAPN6Q9Y6Q1 641 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 AFF2P51816 1311 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 OPA1O60313 960 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 TCP1P17987 556 aaKnown RBP14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 GNAQP50148 359 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 GALNT17Q6IS24 598 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 TYW1BQ6NUM6 668 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 ZNF572Q7Z3I7 529 aaPredicted RBP14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 HEATR3Q7Z4Q2 680 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 AK8Q96MA6 479 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 CAPS2Q9BXY5 557 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 STX8Q9UNK0 236 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 PCDHA13Q9Y5I0 950 aa14.23□□□□□ -0.13
LRRTM1-205ENST00000417012 M0R2N6 131 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 ZNF263O14978 683 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 SERPINB2P05120 415 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 GOLGA8HP0CJ92 632 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 TSPY3P0CV98 308 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 TSPY8P0CW00 308 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 PRLRP16471 622 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 IRAK1P51617 712 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 TADA2BQ86TJ2 420 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 C2CD5Q86YS7 1000 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 DAGLBQ8NCG7 672 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 SPATA4Q8NEY3 305 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 LRRC1Q9BTT6 524 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 CPVLQ9H3G5 476 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 CD209Q9NNX6 404 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 HYOU1Q9Y4L1 999 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 A0A087WUV0 522 aaPredicted RBP14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 PLEKP08567 350 aaPredicted RBP14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 CCT5P48643 541 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 KIF11P52732 1056 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 EPHB4P54760 987 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 STK4Q13043 487 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 ICE2Q659A1 982 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 HINFPQ9BQA5 517 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 MLXIPQ9HAP2 919 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 PLAGL2Q9UPG8 496 aa14.22□□□□□ -0.13
LRRTM1-205ENST00000417012 SHTN1A0MZ66 631 aa14.21□□□□□ -0.13
LRRTM1-205ENST00000417012 EBAG9O00559 213 aa14.21□□□□□ -0.13
LRRTM1-205ENST00000417012 MOCS3O95396 460 aa14.21□□□□□ -0.13
LRRTM1-205ENST00000417012 BAG3O95817 575 aa14.21□□□□□ -0.13
LRRTM1-205ENST00000417012 MATR3P43243 847 aaKnown RBP eCLIP14.21□□□□□ -0.13
LRRTM1-205ENST00000417012 BTDP43251 543 aa14.21□□□□□ -0.13
LRRTM1-205ENST00000417012 AMPD3Q01432 767 aa14.21□□□□□ -0.13
LRRTM1-205ENST00000417012 EZH2Q15910 746 aaKnown RBP14.21□□□□□ -0.13
LRRTM1-205ENST00000417012 CNNM4Q6P4Q7 775 aa14.21□□□□□ -0.13
LRRTM1-205ENST00000417012 OSBPL9Q96SU4 736 aa14.21□□□□□ -0.13
LRRTM1-205ENST00000417012 DMGDHQ9UI17 866 aaKnown RBP14.21□□□□□ -0.13
LRRTM1-205ENST00000417012 FLT1P17948 1338 aa14.21□□□□□ -0.13
LRRTM1-205ENST00000417012 AKR1B10O60218 316 aa14.21□□□□□ -0.13
LRRTM1-205ENST00000417012 OR52Z1P0C646 297 aa14.21□□□□□ -0.13
LRRTM1-205ENST00000417012 HNRNPH3P31942 346 aaKnown RBP14.21□□□□□ -0.13
LRRTM1-205ENST00000417012 PAFAH1B1P43034 410 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms