RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 PCDHA12Q9UN75 941 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 MAPK8IP1Q9UQF2 711 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 COL11A1P12107 1806 aaPredicted RBP12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 PHIPQ8WWQ0 1821 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 FAM86B1E9PN63 330 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 FAM86B2P0C5J1 330 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 GCFC2P16383 781 aaKnown RBP12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 ZNF76P36508 570 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 STAT3P40763 770 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 FXR2P51116 673 aaKnown RBP eCLIP12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 USP11P51784 963 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 TRIML1Q8N9V2 468 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 PRPF38AQ8NAV1 312 aaKnown RBP12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 MLKLQ8NB16 471 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 LPAR1Q92633 364 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 KLRG1Q96E93 195 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 CALML4Q96GE6 196 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 CDK5RAP3Q96JB5 506 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 GSDMAQ96QA5 445 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 ADARB2Q9NS39 739 aaKnown RBP12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 IFNKQ9P0W0 207 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 ZNF112Q9UJU3 913 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 GCOM1H8Y6P7 765 aaPredicted RBP12.01□□□□□ -0.49
SMPD4P1-201ENST00000416717 IKBKBO14920 756 aa12.01□□□□□ -0.49
SMPD4P1-201ENST00000416717 FOSP01100 380 aaPredicted RBP12.01□□□□□ -0.49
SMPD4P1-201ENST00000416717 RPN1P04843 607 aaKnown RBP12.01□□□□□ -0.49
SMPD4P1-201ENST00000416717 POLR2MP0CAP2 368 aa12.01□□□□□ -0.49
SMPD4P1-201ENST00000416717 ALAS1P13196 640 aa12.01□□□□□ -0.49
SMPD4P1-201ENST00000416717 MSNP26038 577 aaKnown RBP12.01□□□□□ -0.49
SMPD4P1-201ENST00000416717 GRB10Q13322 594 aa12.01□□□□□ -0.49
SMPD4P1-201ENST00000416717 SARM1Q6SZW1 724 aa12.01□□□□□ -0.49
SMPD4P1-201ENST00000416717 ILDR2Q71H61 639 aa12.01□□□□□ -0.49
SMPD4P1-201ENST00000416717 FAM43AQ8N2R8 423 aa12.01□□□□□ -0.49
SMPD4P1-201ENST00000416717 ZNF280CQ8ND82 737 aa12.01□□□□□ -0.49
SMPD4P1-201ENST00000416717 RAB34Q9BZG1 259 aa12.01□□□□□ -0.49
SMPD4P1-201ENST00000416717 MRPL11Q9Y3B7 192 aaKnown RBP12.01□□□□□ -0.49
SMPD4P1-201ENST00000416717 PARP14Q460N5 1801 aa12.01□□□□□ -0.49
SMPD4P1-201ENST00000416717 ZNF536O15090 1300 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 PLA2G6O60733 806 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 PTGS1P23219 599 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 SREBF1P36956 1147 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 BACE1P56817 501 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 HS1BP3Q53T59 392 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 KRT79Q5XKE5 535 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 SLC30A10Q6XR72 485 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 CRYGNQ8WXF5 182 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 DCPSQ96C86 337 aaKnown RBP12□□□□□ -0.49
SMPD4P1-201ENST00000416717 WNK4Q96J92 1243 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 PNMA5Q96PV4 448 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 MED15Q96RN5 788 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 XPO4Q9C0E2 1151 aaKnown RBP12□□□□□ -0.49
SMPD4P1-201ENST00000416717 DACH1Q9UI36 760 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 GDAQ9Y2T3 454 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 NFE2L3Q9Y4A8 694 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 CTDP1Q9Y5B0 961 aaPredicted RBP12□□□□□ -0.49
SMPD4P1-201ENST00000416717 NFIBO00712 420 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 ICAM1P05362 532 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 TRAF1Q13077 416 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 MCM6Q14566 821 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 GPR162Q16538 588 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 ECM1Q16610 540 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 PTPN21Q16825 1174 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 SUPT20HL1Q3ZLR7 823 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 CCDC186Q7Z3E2 898 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 SULF1Q8IWU6 871 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 NAP1L4Q99733 375 aaKnown RBP12□□□□□ -0.49
SMPD4P1-201ENST00000416717 AS3MTQ9HBK9 375 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 GINM1Q9NU53 330 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 KBTBD4Q9NVX7 518 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 ZKSCAN5Q9Y2L8 839 aa12□□□□□ -0.49
SMPD4P1-201ENST00000416717 ABCB11O95342 1321 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 GOLGA6L6A8MZA4 724 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 PIK3CDO00329 1044 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 USP2O75604 605 aaPredicted RBP11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 SERPINC1P01008 464 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 FANCCQ00597 558 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 PDIA5Q14554 519 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 CCDC144BQ3MJ40 725 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 KCNK18Q7Z418 384 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 ATG4CQ96DT6 458 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 KCNMB3Q9NPA1 279 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 SAMSN1Q9NSI8 373 aaKnown RBP11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 CTNND2Q9UQB3 1225 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 CYP3A7-CYP3A51PA0A087WV96 503 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 PPP1R3GB7ZBB8 358 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 CYP3A7P24462 503 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 CCT6AP40227 531 aaKnown RBP11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 USP14P54578 494 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 ASIC1P78348 528 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 KMT5BQ4FZB7 885 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 MUM1L1Q5H9M0 696 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 KRT26Q7Z3Y9 468 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 FILIP1Q7Z7B0 1213 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 CNKSR2Q8WXI2 1034 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 LENG9Q96B70 501 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 WDR18Q9BV38 432 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 BLOC1S4Q9NUP1 217 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 PPP1R9AQ9ULJ8 1098 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms