RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 INCENPQ9NQS7 918 aa11.81□□□□□ -0.52
MDC1-202ENST00000416571 SCN10AQ9Y5Y9 1956 aa11.81□□□□□ -0.52
MDC1-202ENST00000416571 RBM47A0AV96 593 aaKnown RBP11.8□□□□□ -0.52
MDC1-202ENST00000416571 BAIAP3O94812 1187 aa11.8□□□□□ -0.52
MDC1-202ENST00000416571 IQCF3P0C7M6 154 aa11.8□□□□□ -0.52
MDC1-202ENST00000416571 TXNP10599 105 aaKnown RBP11.8□□□□□ -0.52
MDC1-202ENST00000416571 POU3F3P20264 500 aaPredicted RBP11.8□□□□□ -0.52
MDC1-202ENST00000416571 MX1P20591 662 aa11.8□□□□□ -0.52
MDC1-202ENST00000416571 DIEXFQ68CQ4 756 aaKnown RBP11.8□□□□□ -0.52
MDC1-202ENST00000416571 BTNL9Q6UXG8 535 aa11.8□□□□□ -0.52
MDC1-202ENST00000416571 HERC6Q8IVU3 1022 aa11.8□□□□□ -0.52
MDC1-202ENST00000416571 VWCEQ96DN2 955 aa11.8□□□□□ -0.52
MDC1-202ENST00000416571 ANAPC4Q9UJX5 808 aa11.8□□□□□ -0.52
MDC1-202ENST00000416571 PRRC2BQ5JSZ5 2229 aaKnown RBP11.8□□□□□ -0.52
MDC1-202ENST00000416571 COL4A4P53420 1690 aaPredicted RBP11.79□□□□□ -0.52
MDC1-202ENST00000416571 TLL1O43897 1013 aa11.79□□□□□ -0.52
MDC1-202ENST00000416571 ORC4O43929 436 aa11.79□□□□□ -0.52
MDC1-202ENST00000416571 RPS6P62753 249 aaKnown RBP11.79□□□□□ -0.52
MDC1-202ENST00000416571 TAP1Q03518 808 aa11.79□□□□□ -0.52
MDC1-202ENST00000416571 DNERQ8NFT8 737 aa11.79□□□□□ -0.52
MDC1-202ENST00000416571 PPP1R13LQ8WUF5 828 aa11.79□□□□□ -0.52
MDC1-202ENST00000416571 HLA-CQ95604 372 aa11.79□□□□□ -0.52
MDC1-202ENST00000416571 TMEM47Q9BQJ4 181 aa11.79□□□□□ -0.52
MDC1-202ENST00000416571 ZBED2Q9BTP6 218 aa11.79□□□□□ -0.52
MDC1-202ENST00000416571 CHD7Q9P2D1 2997 aa11.79□□□□□ -0.52
MDC1-202ENST00000416571 EPOPA6NHQ4 379 aa11.78□□□□□ -0.52
MDC1-202ENST00000416571 A6NJR5 290 aa11.78□□□□□ -0.52
MDC1-202ENST00000416571 FOXP2O15409 715 aa11.78□□□□□ -0.52
MDC1-202ENST00000416571 PDHBP11177 359 aa11.78□□□□□ -0.52
MDC1-202ENST00000416571 NOVP48745 357 aa11.78□□□□□ -0.52
MDC1-202ENST00000416571 PTGISQ16647 500 aa11.78□□□□□ -0.52
MDC1-202ENST00000416571 VPS53Q5VIR6 699 aa11.78□□□□□ -0.52
MDC1-202ENST00000416571 KRT40Q6A162 431 aa11.78□□□□□ -0.52
MDC1-202ENST00000416571 CAGE1Q8TC20 777 aa11.78□□□□□ -0.52
MDC1-202ENST00000416571 OTUD7AQ8TE49 926 aaPredicted RBP11.78□□□□□ -0.52
MDC1-202ENST00000416571 AFAP1L1Q8TED9 768 aa11.78□□□□□ -0.52
MDC1-202ENST00000416571 CLEC4DQ8WXI8 215 aa11.78□□□□□ -0.52
MDC1-202ENST00000416571 COPS5Q92905 334 aa11.78□□□□□ -0.52
MDC1-202ENST00000416571 WDR19Q8NEZ3 1342 aa11.78□□□□□ -0.52
MDC1-202ENST00000416571 TRIP12Q14669 1992 aaPredicted RBP11.78□□□□□ -0.52
MDC1-202ENST00000416571 FGRP09769 529 aa11.77□□□□□ -0.53
MDC1-202ENST00000416571 EDNRBP24530 442 aa11.77□□□□□ -0.53
MDC1-202ENST00000416571 GRB10Q13322 594 aa11.77□□□□□ -0.53
MDC1-202ENST00000416571 USH1GQ495M9 461 aa11.77□□□□□ -0.53
MDC1-202ENST00000416571 EVI5LQ96CN4 794 aa11.77□□□□□ -0.53
MDC1-202ENST00000416571 HELLSQ9NRZ9 838 aa11.77□□□□□ -0.53
MDC1-202ENST00000416571 TCP11L1Q9NUJ3 509 aa11.77□□□□□ -0.53
MDC1-202ENST00000416571 PTPRSQ13332 1948 aa11.76□□□□□ -0.53
MDC1-202ENST00000416571 PARNO95453 639 aaKnown RBP11.76□□□□□ -0.53
MDC1-202ENST00000416571 GH1P01241 217 aa11.76□□□□□ -0.53
MDC1-202ENST00000416571 FGAP02671 866 aa11.76□□□□□ -0.53
MDC1-202ENST00000416571 CASTP20810 708 aaKnown RBP11.76□□□□□ -0.53
MDC1-202ENST00000416571 ZNF543Q08ER8 600 aa11.76□□□□□ -0.53
MDC1-202ENST00000416571 ALX1Q15699 326 aa11.76□□□□□ -0.53
MDC1-202ENST00000416571 TMEM31Q5JXX7 168 aa11.76□□□□□ -0.53
MDC1-202ENST00000416571 GPATCH4Q5T3I0 446 aaKnown RBP11.76□□□□□ -0.53
MDC1-202ENST00000416571 SEPT14Q6ZU15 432 aa11.76□□□□□ -0.53
MDC1-202ENST00000416571 CHST3Q7LGC8 479 aa11.76□□□□□ -0.53
MDC1-202ENST00000416571 TET1Q8NFU7 2136 aa11.76□□□□□ -0.53
MDC1-202ENST00000416571 TTC14Q96N46 770 aa11.76□□□□□ -0.53
MDC1-202ENST00000416571 CRBNQ96SW2 442 aa11.76□□□□□ -0.53
MDC1-202ENST00000416571 EPHX3Q9H6B9 360 aa11.76□□□□□ -0.53
MDC1-202ENST00000416571 TRANK1O15050 2925 aa11.76□□□□□ -0.53
MDC1-202ENST00000416571 ARHGEF15O94989 841 aa11.75□□□□□ -0.53
MDC1-202ENST00000416571 ARIH2O95376 493 aa11.75□□□□□ -0.53
MDC1-202ENST00000416571 MMP3P08254 477 aa11.75□□□□□ -0.53
MDC1-202ENST00000416571 SELPP16109 830 aa11.75□□□□□ -0.53
MDC1-202ENST00000416571 HAND2P61296 217 aa11.75□□□□□ -0.53
MDC1-202ENST00000416571 WDR5P61964 334 aaKnown RBP11.75□□□□□ -0.53
MDC1-202ENST00000416571 MCMDC2Q4G0Z9 681 aa11.75□□□□□ -0.53
MDC1-202ENST00000416571 CNKSR3Q6P9H4 555 aa11.75□□□□□ -0.53
MDC1-202ENST00000416571 MFSD6Q6ZSS7 791 aa11.75□□□□□ -0.53
MDC1-202ENST00000416571 LRRC8DQ7L1W4 858 aa11.75□□□□□ -0.53
MDC1-202ENST00000416571 C7orf31Q8N865 590 aa11.75□□□□□ -0.53
MDC1-202ENST00000416571 GDPD5Q8WTR4 605 aa11.75□□□□□ -0.53
MDC1-202ENST00000416571 AFG1LQ8WV93 481 aa11.75□□□□□ -0.53
MDC1-202ENST00000416571 LRFN3Q9BTN0 628 aa11.75□□□□□ -0.53
MDC1-202ENST00000416571 MTUS1Q9ULD2 1270 aa11.75□□□□□ -0.53
MDC1-202ENST00000416571 KIAA1217Q5T5P2 1943 aa11.75□□□□□ -0.53
MDC1-202ENST00000416571 XIRP2A4UGR9 3374 aa11.75□□□□□ -0.53
MDC1-202ENST00000416571 REV3LO60673 3130 aa11.75□□□□□ -0.53
MDC1-202ENST00000416571 DHX16O60231 1041 aaKnown RBP11.74□□□□□ -0.53
MDC1-202ENST00000416571 LPXNO60711 386 aa11.74□□□□□ -0.53
MDC1-202ENST00000416571 EFCAB14O75071 495 aa11.74□□□□□ -0.53
MDC1-202ENST00000416571 GOLGA8HP0CJ92 632 aa11.74□□□□□ -0.53
MDC1-202ENST00000416571 PCP11498 1178 aaKnown RBP11.74□□□□□ -0.53
MDC1-202ENST00000416571 STXBP2Q15833 593 aa11.74□□□□□ -0.53
MDC1-202ENST00000416571 DGKDQ16760 1214 aa11.74□□□□□ -0.53
MDC1-202ENST00000416571 LY6KQ17RY6 165 aa11.74□□□□□ -0.53
MDC1-202ENST00000416571 ANKRD45Q5TZF3 282 aa11.74□□□□□ -0.53
MDC1-202ENST00000416571 GDF6Q6KF10 455 aaPredicted RBP11.74□□□□□ -0.53
MDC1-202ENST00000416571 SESTD1Q86VW0 696 aa11.74□□□□□ -0.53
MDC1-202ENST00000416571 RGS22Q8NE09 1264 aa11.74□□□□□ -0.53
MDC1-202ENST00000416571 NSUN6Q8TEA1 469 aaKnown RBP11.74□□□□□ -0.53
MDC1-202ENST00000416571 ESR2Q92731 530 aa11.74□□□□□ -0.53
MDC1-202ENST00000416571 KATNAL1Q9BW62 490 aa11.74□□□□□ -0.53
MDC1-202ENST00000416571 RNF41Q9H4P4 317 aaPredicted RBP11.74□□□□□ -0.53
MDC1-202ENST00000416571 LMCD1Q9NZU5 365 aa11.74□□□□□ -0.53
MDC1-202ENST00000416571 PCDHB15Q9Y5E8 787 aa11.74□□□□□ -0.53
MDC1-202ENST00000416571 ABCB11O95342 1321 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms