RNA–Protein interactions for RNA: ENST00000415472.6

RBM28-202, Transcript of RNA binding motif protein 28, humanhuman

TSL 2 BASIC

Gene RBM28, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-202ENST00000415472 PCMTD1Q96MG8 357 aaPredicted RBP13.02□□□□□ -0.32
RBM28-202ENST00000415472 NHEJ1Q9H9Q4 299 aaPredicted RBP13.02□□□□□ -0.32
RBM28-202ENST00000415472 MYO1AQ9UBC5 1043 aa13.02□□□□□ -0.32
RBM28-202ENST00000415472 LTBP1Q14766 1721 aa13.02□□□□□ -0.32
RBM28-202ENST00000415472 MYH7BA7E2Y1 1941 aa13.02□□□□□ -0.32
RBM28-202ENST00000415472 BICDL2A1A5D9 508 aa13.02□□□□□ -0.33
RBM28-202ENST00000415472 CTAGE15A4D2H0 777 aa13.02□□□□□ -0.33
RBM28-202ENST00000415472 ATP8B1O43520 1251 aa13.02□□□□□ -0.33
RBM28-202ENST00000415472 CTAGE8P0CG41 777 aa13.02□□□□□ -0.33
RBM28-202ENST00000415472 BRD3Q15059 726 aa13.02□□□□□ -0.33
RBM28-202ENST00000415472 DOK7Q18PE1 504 aa13.02□□□□□ -0.33
RBM28-202ENST00000415472 CENPPQ6IPU0 288 aa13.02□□□□□ -0.33
RBM28-202ENST00000415472 SV2BQ7L1I2 683 aa13.02□□□□□ -0.33
RBM28-202ENST00000415472 CTAGE6Q86UF2 777 aa13.02□□□□□ -0.33
RBM28-202ENST00000415472 CERS3Q8IU89 383 aa13.02□□□□□ -0.33
RBM28-202ENST00000415472 ZFPM1Q8IX07 1006 aa13.02□□□□□ -0.33
RBM28-202ENST00000415472 CTAGE4Q8IX94 777 aa13.02□□□□□ -0.33
RBM28-202ENST00000415472 PCDHAC2Q9Y5I4 1007 aa13.02□□□□□ -0.33
RBM28-202ENST00000415472 USP17L10C9JJH3 530 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 POLRMTO00411 1230 aaKnown RBP13.01□□□□□ -0.33
RBM28-202ENST00000415472 PSMD14O00487 310 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 MAP2K7O14733 419 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 SHMT1P34896 483 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 FXR2P51116 673 aaKnown RBP eCLIP13.01□□□□□ -0.33
RBM28-202ENST00000415472 WHAMMP3Q1A5X7 153 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 KCTD1Q719H9 257 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 CCDC155Q8N6L0 562 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 SMCR8Q8TEV9 937 aaPredicted RBP13.01□□□□□ -0.33
RBM28-202ENST00000415472 TBC1D22AQ8WUA7 517 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 LARP4BQ92615 738 aaKnown RBP13.01□□□□□ -0.33
RBM28-202ENST00000415472 HAS1Q92839 578 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 MMS19Q96T76 1030 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 FGFBP2Q9BYJ0 223 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 HAUS4Q9H6D7 363 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 PLIN4Q96Q06 1357 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 FAM196BA6NMK8 535 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 IDEP14735 1019 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 ADRA2BP18089 450 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 ZBED6P86452 979 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 ZNF543Q08ER8 600 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 NFIAQ12857 509 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 CNNM4Q6P4Q7 775 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 KIAA1328Q86T90 577 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 SNX29Q8TEQ0 813 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 JAKMIP2Q96AA8 810 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 CAPZA3Q96KX2 299 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 KCNQ5Q9NR82 932 aa13.01□□□□□ -0.33
RBM28-202ENST00000415472 FAM207AQ9NSI2 230 aaPredicted RBP13.01□□□□□ -0.33
RBM28-202ENST00000415472 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.01□□□□□ -0.33
RBM28-202ENST00000415472 MACROD2A1Z1Q3 448 aa13□□□□□ -0.33
RBM28-202ENST00000415472 ZNF185O15231 689 aa13□□□□□ -0.33
RBM28-202ENST00000415472 N4BP1O75113 896 aaKnown RBP13□□□□□ -0.33
RBM28-202ENST00000415472 CYP2C19P33261 490 aa13□□□□□ -0.33
RBM28-202ENST00000415472 AMPD3Q01432 767 aa13□□□□□ -0.33
RBM28-202ENST00000415472 TSR1Q2NL82 804 aaKnown RBP13□□□□□ -0.33
RBM28-202ENST00000415472 ASPRV1Q53RT3 343 aa13□□□□□ -0.33
RBM28-202ENST00000415472 UNC13DQ70J99 1090 aa13□□□□□ -0.33
RBM28-202ENST00000415472 SEPT12Q8IYM1 358 aa13□□□□□ -0.33
RBM28-202ENST00000415472 RAD54LQ92698 747 aa13□□□□□ -0.33
RBM28-202ENST00000415472 DDX12PQ92771 950 aa13□□□□□ -0.33
RBM28-202ENST00000415472 CCDC47Q96A33 483 aaKnown RBP13□□□□□ -0.33
RBM28-202ENST00000415472 ERGIC2Q96RQ1 377 aa13□□□□□ -0.33
RBM28-202ENST00000415472 USP40Q9NVE5 1235 aa13□□□□□ -0.33
RBM28-202ENST00000415472 SIK3Q9Y2K2 1263 aa13□□□□□ -0.33
RBM28-202ENST00000415472 PDE2AO00408 941 aaPredicted RBP13□□□□□ -0.33
RBM28-202ENST00000415472 PPEF1O14829 653 aaPredicted RBP13□□□□□ -0.33
RBM28-202ENST00000415472 TTLL1O95922 423 aa13□□□□□ -0.33
RBM28-202ENST00000415472 CACNB3P54284 484 aa13□□□□□ -0.33
RBM28-202ENST00000415472 SEMA3FQ13275 785 aa13□□□□□ -0.33
RBM28-202ENST00000415472 TUBB2AQ13885 445 aa13□□□□□ -0.33
RBM28-202ENST00000415472 LRRC55Q6ZSA7 311 aa13□□□□□ -0.33
RBM28-202ENST00000415472 SLF2Q8IX21 1173 aa13□□□□□ -0.33
RBM28-202ENST00000415472 CRAMP1Q96RY5 1269 aa13□□□□□ -0.33
RBM28-202ENST00000415472 TUBB2BQ9BVA1 445 aa13□□□□□ -0.33
RBM28-202ENST00000415472 PDE11AQ9HCR9 933 aa13□□□□□ -0.33
RBM28-202ENST00000415472 ARHGAP20Q9P2F6 1191 aa13□□□□□ -0.33
RBM28-202ENST00000415472 SERPINB13Q9UIV8 391 aa13□□□□□ -0.33
RBM28-202ENST00000415472 L1RE1Q9UN81 338 aa13□□□□□ -0.33
RBM28-202ENST00000415472 MYH10P35580 1976 aa13□□□□□ -0.33
RBM28-202ENST00000415472 PNMA6FA0A0J9YX94 578 aa12.99□□□□□ -0.33
RBM28-202ENST00000415472 CLK2P49760 499 aaKnown RBP12.99□□□□□ -0.33
RBM28-202ENST00000415472 TMEM119Q4V9L6 283 aa12.99□□□□□ -0.33
RBM28-202ENST00000415472 VWA3BQ502W6 1294 aa12.99□□□□□ -0.33
RBM28-202ENST00000415472 CDC42EP5Q6NZY7 148 aa12.99□□□□□ -0.33
RBM28-202ENST00000415472 NEK11Q8NG66 645 aa12.99□□□□□ -0.33
RBM28-202ENST00000415472 HNRNPLLQ8WVV9 542 aaKnown RBP12.99□□□□□ -0.33
RBM28-202ENST00000415472 CDK5RAP3Q96JB5 506 aa12.99□□□□□ -0.33
RBM28-202ENST00000415472 NDST4Q9H3R1 872 aa12.99□□□□□ -0.33
RBM28-202ENST00000415472 RIC8AQ9NPQ8 531 aa12.99□□□□□ -0.33
RBM28-202ENST00000415472 STK17AQ9UEE5 414 aa12.99□□□□□ -0.33
RBM28-202ENST00000415472 EIF3CLB5ME19 914 aaKnown RBP12.99□□□□□ -0.33
RBM28-202ENST00000415472 USP17L15C9J2P7 530 aa12.99□□□□□ -0.33
RBM28-202ENST00000415472 USP17L13C9JLJ4 530 aa12.99□□□□□ -0.33
RBM28-202ENST00000415472 USP17L11C9JVI0 530 aa12.99□□□□□ -0.33
RBM28-202ENST00000415472 USP17L18D6R9N7 530 aa12.99□□□□□ -0.33
RBM28-202ENST00000415472 USP17L22D6RA61 530 aa12.99□□□□□ -0.33
RBM28-202ENST00000415472 USP17L17D6RBQ6 530 aa12.99□□□□□ -0.33
RBM28-202ENST00000415472 USP17L19D6RCP7 530 aa12.99□□□□□ -0.33
RBM28-202ENST00000415472 USP17L20D6RJB6 530 aa12.99□□□□□ -0.33
RBM28-202ENST00000415472 MPHOSPH10O00566 681 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms