RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 MOXD2PA6NHM9 499 aa16.93■□□□□ 0.3
CHD1-202ENST00000414220 NR3C2P08235 984 aa16.93■□□□□ 0.3
CHD1-202ENST00000414220 EIF2AK2P19525 551 aaKnown RBP16.93■□□□□ 0.3
CHD1-202ENST00000414220 PDIA3P30101 505 aaKnown RBP16.93■□□□□ 0.3
CHD1-202ENST00000414220 HOXA13P31271 388 aaPredicted RBP16.93■□□□□ 0.3
CHD1-202ENST00000414220 ADD1P35611 737 aaKnown RBP16.93■□□□□ 0.3
CHD1-202ENST00000414220 GJA9P57773 515 aa16.93■□□□□ 0.3
CHD1-202ENST00000414220 TTLL4Q14679 1199 aa16.93■□□□□ 0.3
CHD1-202ENST00000414220 PPP1R18Q6NYC8 613 aa16.93■□□□□ 0.3
CHD1-202ENST00000414220 TRIM22Q8IYM9 498 aa16.93■□□□□ 0.3
CHD1-202ENST00000414220 WDR11Q9BZH6 1224 aa16.93■□□□□ 0.3
CHD1-202ENST00000414220 ALDH8A1Q9H2A2 487 aaPredicted RBP16.93■□□□□ 0.3
CHD1-202ENST00000414220 EHMT1Q9H9B1 1298 aa16.93■□□□□ 0.3
CHD1-202ENST00000414220 ASTN1O14525 1302 aa16.93■□□□□ 0.3
CHD1-202ENST00000414220 PIK3CDO00329 1044 aa16.92■□□□□ 0.3
CHD1-202ENST00000414220 DYNC1LI2O43237 492 aaPredicted RBP16.92■□□□□ 0.3
CHD1-202ENST00000414220 COL6A1P12109 1028 aa16.92■□□□□ 0.3
CHD1-202ENST00000414220 CDC27P30260 824 aa16.92■□□□□ 0.3
CHD1-202ENST00000414220 CCND2P30279 289 aa16.92■□□□□ 0.3
CHD1-202ENST00000414220 MNX1P50219 401 aaPredicted RBP16.92■□□□□ 0.3
CHD1-202ENST00000414220 NAPAP54920 295 aa16.92■□□□□ 0.3
CHD1-202ENST00000414220 TOB2Q14106 344 aaPredicted RBP16.92■□□□□ 0.3
CHD1-202ENST00000414220 DUSP28Q4G0W2 176 aa16.92■□□□□ 0.3
CHD1-202ENST00000414220 GNASQ5JWF2 1037 aa16.92■□□□□ 0.3
CHD1-202ENST00000414220 TAPT1Q6NXT6 567 aa16.92■□□□□ 0.3
CHD1-202ENST00000414220 KCNV1Q6PIU1 500 aa16.92■□□□□ 0.3
CHD1-202ENST00000414220 TLK2Q86UE8 772 aa16.92■□□□□ 0.3
CHD1-202ENST00000414220 COL20A1Q9P218 1284 aa16.92■□□□□ 0.3
CHD1-202ENST00000414220 CNTNAP5Q8WYK1 1306 aa16.92■□□□□ 0.3
CHD1-202ENST00000414220 SYNRGQ9UMZ2 1314 aa16.92■□□□□ 0.3
CHD1-202ENST00000414220 hCG_1642624A0A1W2PR95 340 aa16.91■□□□□ 0.3
CHD1-202ENST00000414220 RBM47A0AV96 593 aaKnown RBP16.91■□□□□ 0.3
CHD1-202ENST00000414220 SPDYE3A6NKU9 549 aa16.91■□□□□ 0.3
CHD1-202ENST00000414220 OPLAHO14841 1288 aa16.91■□□□□ 0.3
CHD1-202ENST00000414220 PRPF3O43395 683 aaKnown RBP16.91■□□□□ 0.3
CHD1-202ENST00000414220 ADAMTS4O75173 837 aa16.91■□□□□ 0.3
CHD1-202ENST00000414220 STAM2O75886 525 aa16.91■□□□□ 0.3
CHD1-202ENST00000414220 CDKL5O76039 1030 aa16.91■□□□□ 0.3
CHD1-202ENST00000414220 TXNP10599 105 aaKnown RBP16.91■□□□□ 0.3
CHD1-202ENST00000414220 MYCLP12524 364 aaPredicted RBP16.91■□□□□ 0.3
CHD1-202ENST00000414220 SMPD1P17405 629 aa16.91■□□□□ 0.3
CHD1-202ENST00000414220 CCT2P78371 535 aaKnown RBP16.91■□□□□ 0.3
CHD1-202ENST00000414220 SEPT14Q6ZU15 432 aa16.91■□□□□ 0.3
CHD1-202ENST00000414220 VTI1AQ96AJ9 217 aa16.91■□□□□ 0.3
CHD1-202ENST00000414220 GLT1D1Q96MS3 346 aa16.91■□□□□ 0.3
CHD1-202ENST00000414220 PDCD2LQ9BRP1 358 aa16.91■□□□□ 0.3
CHD1-202ENST00000414220 UPF3AQ9H1J1 476 aaKnown RBP16.91■□□□□ 0.3
CHD1-202ENST00000414220 PDGFCQ9NRA1 345 aa16.91■□□□□ 0.3
CHD1-202ENST00000414220 PHF24Q9UPV7 400 aa16.91■□□□□ 0.3
CHD1-202ENST00000414220 MYH6P13533 1939 aa16.91■□□□□ 0.3
CHD1-202ENST00000414220 NID2Q14112 1375 aa16.9■□□□□ 0.3
CHD1-202ENST00000414220 CABYRO75952 493 aa16.9■□□□□ 0.3
CHD1-202ENST00000414220 CST5P28325 142 aaPredicted RBP16.9■□□□□ 0.3
CHD1-202ENST00000414220 CPT1AP50416 773 aa16.9■□□□□ 0.3
CHD1-202ENST00000414220 NEK4P51957 841 aa16.9■□□□□ 0.3
CHD1-202ENST00000414220 KCNA10Q16322 511 aa16.9■□□□□ 0.3
CHD1-202ENST00000414220 GNPTABQ3T906 1256 aa16.9■□□□□ 0.3
CHD1-202ENST00000414220 C8orf34Q49A92 452 aa16.9■□□□□ 0.3
CHD1-202ENST00000414220 PRPF38BQ5VTL8 546 aaKnown RBP16.9■□□□□ 0.3
CHD1-202ENST00000414220 MCTP2Q6DN12 878 aa16.9■□□□□ 0.3
CHD1-202ENST00000414220 XRRA1Q6P2D8 792 aa16.9■□□□□ 0.3
CHD1-202ENST00000414220 KLHDC9Q8NEP7 349 aa16.9■□□□□ 0.3
CHD1-202ENST00000414220 LENG1Q96BZ8 264 aaPredicted RBP16.9■□□□□ 0.3
CHD1-202ENST00000414220 RNF26Q9BY78 433 aaPredicted RBP16.9■□□□□ 0.3
CHD1-202ENST00000414220 SLKQ9H2G2 1235 aaPredicted RBP16.9■□□□□ 0.3
CHD1-202ENST00000414220 FAM217BQ9NTX9 383 aaPredicted RBP16.9■□□□□ 0.3
CHD1-202ENST00000414220 BARHL2Q9NY43 387 aa16.9■□□□□ 0.3
CHD1-202ENST00000414220 GNEQ9Y223 722 aaKnown RBP16.9■□□□□ 0.3
CHD1-202ENST00000414220 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.89■□□□□ 0.29
CHD1-202ENST00000414220 SEC24BO95487 1268 aa16.89■□□□□ 0.29
CHD1-202ENST00000414220 FOSP01100 380 aaPredicted RBP16.89■□□□□ 0.29
CHD1-202ENST00000414220 SCG2P13521 617 aa16.89■□□□□ 0.29
CHD1-202ENST00000414220 IFNAR1P17181 557 aa16.89■□□□□ 0.29
CHD1-202ENST00000414220 ACLYP53396 1101 aa16.89■□□□□ 0.29
CHD1-202ENST00000414220 SSRP1Q08945 709 aaKnown RBP16.89■□□□□ 0.29
CHD1-202ENST00000414220 FUT2Q10981 343 aa16.89■□□□□ 0.29
CHD1-202ENST00000414220 PGM5Q15124 567 aa16.89■□□□□ 0.29
CHD1-202ENST00000414220 FSCN1Q16658 493 aaKnown RBP16.89■□□□□ 0.29
CHD1-202ENST00000414220 PFKFB3Q16875 520 aaPredicted RBP16.89■□□□□ 0.29
CHD1-202ENST00000414220 WWC2Q6AWC2 1192 aa16.89■□□□□ 0.29
CHD1-202ENST00000414220 USP17L6PQ6QN14 398 aa16.89■□□□□ 0.29
CHD1-202ENST00000414220 VSIG10LQ86VR7 867 aa16.89■□□□□ 0.29
CHD1-202ENST00000414220 OR6J1Q8NGC5 347 aa16.89■□□□□ 0.29
CHD1-202ENST00000414220 GPKOWQ92917 476 aaPredicted RBP eCLIP16.89■□□□□ 0.29
CHD1-202ENST00000414220 FERMT2Q96AC1 680 aa16.89■□□□□ 0.29
CHD1-202ENST00000414220 IL17RAQ96F46 866 aa16.89■□□□□ 0.29
CHD1-202ENST00000414220 SLC26A6Q9BXS9 759 aa16.89■□□□□ 0.29
CHD1-202ENST00000414220 C6orf50Q9HD87 102 aa16.89■□□□□ 0.29
CHD1-202ENST00000414220 STARD7Q9NQZ5 370 aa16.89■□□□□ 0.29
CHD1-202ENST00000414220 PRKAG2Q9UGJ0 569 aa16.89■□□□□ 0.29
CHD1-202ENST00000414220 MRVI1Q9Y6F6 885 aa16.89■□□□□ 0.29
CHD1-202ENST00000414220 SMCHD1A6NHR9 2005 aa16.89■□□□□ 0.29
CHD1-202ENST00000414220 BAZ2BQ9UIF8 2168 aaKnown RBP16.88■□□□□ 0.29
CHD1-202ENST00000414220 SMCO2A6NFE2 343 aa16.88■□□□□ 0.29
CHD1-202ENST00000414220 MEIS2O14770 477 aa16.88■□□□□ 0.29
CHD1-202ENST00000414220 KPNA6O60684 536 aa16.88■□□□□ 0.29
CHD1-202ENST00000414220 GNA11P29992 359 aa16.88■□□□□ 0.29
CHD1-202ENST00000414220 ADCY7P51828 1080 aa16.88■□□□□ 0.29
CHD1-202ENST00000414220 ATN1P54259 1190 aaPredicted RBP16.88■□□□□ 0.29
CHD1-202ENST00000414220 NKX3-2P78367 333 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms