RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 FSCN1Q16658 493 aaKnown RBP19.56■□□□□ 0.72
SCAMP4-204ENST00000414057 TAPT1Q6NXT6 567 aa19.56■□□□□ 0.72
SCAMP4-204ENST00000414057 FBXO16Q8IX29 292 aaPredicted RBP19.56■□□□□ 0.72
SCAMP4-204ENST00000414057 DEFB123Q8N688 67 aa19.56■□□□□ 0.72
SCAMP4-204ENST00000414057 CLEC4DQ8WXI8 215 aa19.56■□□□□ 0.72
SCAMP4-204ENST00000414057 BRF1Q92994 677 aa19.56■□□□□ 0.72
SCAMP4-204ENST00000414057 TCEANC2Q96MN5 208 aa19.56■□□□□ 0.72
SCAMP4-204ENST00000414057 SZT2Q5T011 3432 aa19.56■□□□□ 0.72
SCAMP4-204ENST00000414057 DYNC1LI2O43237 492 aaPredicted RBP19.55■□□□□ 0.72
SCAMP4-204ENST00000414057 DHX16O60231 1041 aaKnown RBP19.55■□□□□ 0.72
SCAMP4-204ENST00000414057 SMPD1P17405 629 aa19.55■□□□□ 0.72
SCAMP4-204ENST00000414057 RPS6P62753 249 aaKnown RBP19.55■□□□□ 0.72
SCAMP4-204ENST00000414057 COL9A3Q14050 684 aaPredicted RBP19.55■□□□□ 0.72
SCAMP4-204ENST00000414057 SART3Q15020 963 aaKnown RBP19.55■□□□□ 0.72
SCAMP4-204ENST00000414057 USH1GQ495M9 461 aa19.55■□□□□ 0.72
SCAMP4-204ENST00000414057 ZNF274Q96GC6 653 aaPredicted RBP19.55■□□□□ 0.72
SCAMP4-204ENST00000414057 PURBQ96QR8 312 aaKnown RBP19.55■□□□□ 0.72
SCAMP4-204ENST00000414057 ABCB11O95342 1321 aa19.55■□□□□ 0.72
SCAMP4-204ENST00000414057 ERICH2A1L162 156 aa19.54■□□□□ 0.72
SCAMP4-204ENST00000414057 CDK7P50613 346 aa19.54■□□□□ 0.72
SCAMP4-204ENST00000414057 ANTXR2P58335 489 aa19.54■□□□□ 0.72
SCAMP4-204ENST00000414057 PDE4DQ08499 809 aa19.54■□□□□ 0.72
SCAMP4-204ENST00000414057 CDC37Q16543 378 aaPredicted RBP19.54■□□□□ 0.72
SCAMP4-204ENST00000414057 ME3Q16798 604 aa19.54■□□□□ 0.72
SCAMP4-204ENST00000414057 DUSP28Q4G0W2 176 aa19.54■□□□□ 0.72
SCAMP4-204ENST00000414057 MCF2L2Q86YR7 1114 aa19.54■□□□□ 0.72
SCAMP4-204ENST00000414057 ADGRF4Q8IZF3 695 aa19.54■□□□□ 0.72
SCAMP4-204ENST00000414057 PDGFCQ9NRA1 345 aa19.54■□□□□ 0.72
SCAMP4-204ENST00000414057 LAMA3Q16787 3333 aa19.54■□□□□ 0.72
SCAMP4-204ENST00000414057 CTAGE5O15320 804 aa19.54■□□□□ 0.72
SCAMP4-204ENST00000414057 LIFRP42702 1097 aa19.54■□□□□ 0.72
SCAMP4-204ENST00000414057 IRX5P78411 483 aaPredicted RBP19.54■□□□□ 0.72
SCAMP4-204ENST00000414057 BEX3Q00994 111 aa19.54■□□□□ 0.72
SCAMP4-204ENST00000414057 FPGSQ05932 587 aa19.54■□□□□ 0.72
SCAMP4-204ENST00000414057 SHHQ15465 462 aa19.54■□□□□ 0.72
SCAMP4-204ENST00000414057 BRDTQ58F21 947 aaPredicted RBP19.54■□□□□ 0.72
SCAMP4-204ENST00000414057 SLC30A10Q6XR72 485 aa19.54■□□□□ 0.72
SCAMP4-204ENST00000414057 NKRFO15226 690 aaKnown RBP eCLIP19.53■□□□□ 0.722e-6■□□□□ 8.4
SCAMP4-204ENST00000414057 TIMP1P01033 207 aa19.53■□□□□ 0.72
SCAMP4-204ENST00000414057 FAM109BQ6ICB4 259 aaPredicted RBP19.53■□□□□ 0.72
SCAMP4-204ENST00000414057 CXCL17Q6UXB2 119 aa19.53■□□□□ 0.72
SCAMP4-204ENST00000414057 TMTC2Q8N394 836 aa19.53■□□□□ 0.72
SCAMP4-204ENST00000414057 WDR11Q9BZH6 1224 aa19.53■□□□□ 0.72
SCAMP4-204ENST00000414057 MRPL11Q9Y3B7 192 aaKnown RBP19.53■□□□□ 0.72
SCAMP4-204ENST00000414057 RBM47A0AV96 593 aaKnown RBP19.52■□□□□ 0.72
SCAMP4-204ENST00000414057 SH2B2O14492 632 aaPredicted RBP19.52■□□□□ 0.72
SCAMP4-204ENST00000414057 PFKFB2O60825 505 aa19.52■□□□□ 0.72
SCAMP4-204ENST00000414057 PDIA4P13667 645 aaKnown RBP19.52■□□□□ 0.72
SCAMP4-204ENST00000414057 CPT1AP50416 773 aa19.52■□□□□ 0.72
SCAMP4-204ENST00000414057 TRAF1Q13077 416 aa19.52■□□□□ 0.72
SCAMP4-204ENST00000414057 CYB5R4Q7L1T6 521 aa19.52■□□□□ 0.72
SCAMP4-204ENST00000414057 SGMS1Q86VZ5 419 aa19.52■□□□□ 0.72
SCAMP4-204ENST00000414057 FBXO11Q86XK2 927 aa19.52■□□□□ 0.72
SCAMP4-204ENST00000414057 GTF3C6Q969F1 213 aa19.52■□□□□ 0.72
SCAMP4-204ENST00000414057 LRRC2Q9BYS8 371 aa19.52■□□□□ 0.72
SCAMP4-204ENST00000414057 CPVLQ9H3G5 476 aa19.52■□□□□ 0.72
SCAMP4-204ENST00000414057 TBX21Q9UL17 535 aa19.52■□□□□ 0.72
SCAMP4-204ENST00000414057 DDX49Q9Y6V7 483 aaKnown RBP19.52■□□□□ 0.72
SCAMP4-204ENST00000414057 LTBP2Q14767 1821 aa19.52■□□□□ 0.72
SCAMP4-204ENST00000414057 LARGE1O95461 756 aa19.51■□□□□ 0.71
SCAMP4-204ENST00000414057 EDNRBP24530 442 aa19.51■□□□□ 0.71
SCAMP4-204ENST00000414057 ITGB8P26012 769 aa19.51■□□□□ 0.71
SCAMP4-204ENST00000414057 NUCB2P80303 420 aa19.51■□□□□ 0.71
SCAMP4-204ENST00000414057 ITGA7Q13683 1181 aa19.51■□□□□ 0.71
SCAMP4-204ENST00000414057 SEC23AQ15436 765 aa19.51■□□□□ 0.71
SCAMP4-204ENST00000414057 MFSD5Q6N075 450 aa19.51■□□□□ 0.71
SCAMP4-204ENST00000414057 CHST3Q7LGC8 479 aa19.51■□□□□ 0.71
SCAMP4-204ENST00000414057 SCFD2Q8WU76 684 aa19.51■□□□□ 0.71
SCAMP4-204ENST00000414057 VAT1LQ9HCJ6 419 aa19.51■□□□□ 0.71
SCAMP4-204ENST00000414057 FOXD4L1Q9NU39 408 aa19.51■□□□□ 0.71
SCAMP4-204ENST00000414057 POLR3EQ9NVU0 708 aa19.51■□□□□ 0.71
SCAMP4-204ENST00000414057 MCM3APO60318 1980 aa19.51■□□□□ 0.71
SCAMP4-204ENST00000414057 IFIT3O14879 490 aaKnown RBP19.5■□□□□ 0.71
SCAMP4-204ENST00000414057 APOBRQ0VD83 1088 aa19.5■□□□□ 0.71
SCAMP4-204ENST00000414057 PPP2R5BQ15173 497 aa19.5■□□□□ 0.71
SCAMP4-204ENST00000414057 QRICH1Q2TAL8 776 aa19.5■□□□□ 0.71
SCAMP4-204ENST00000414057 C9orf50Q5SZB4 431 aa19.5■□□□□ 0.71
SCAMP4-204ENST00000414057 CCDC83Q8IWF9 413 aa19.5■□□□□ 0.71
SCAMP4-204ENST00000414057 FAM126BQ8IXS8 530 aa19.5■□□□□ 0.71
SCAMP4-204ENST00000414057 TMEM199Q8N511 208 aa19.5■□□□□ 0.71
SCAMP4-204ENST00000414057 SLC43A3Q8NBI5 491 aa19.5■□□□□ 0.71
SCAMP4-204ENST00000414057 IGDCC4Q8TDY8 1250 aa19.5■□□□□ 0.71
SCAMP4-204ENST00000414057 RNPC3Q96LT9 517 aaKnown RBP19.5■□□□□ 0.71
SCAMP4-204ENST00000414057 LARP6Q9BRS8 491 aaKnown RBP19.5■□□□□ 0.71
SCAMP4-204ENST00000414057 LLPHQ9BRT6 129 aaKnown RBP19.5■□□□□ 0.71
SCAMP4-204ENST00000414057 AMNQ9BXJ7 453 aa19.5■□□□□ 0.71
SCAMP4-204ENST00000414057 JMJD4Q9H9V9 463 aa19.5■□□□□ 0.71
SCAMP4-204ENST00000414057 GPHNQ9NQX3 736 aaPredicted RBP19.5■□□□□ 0.71
SCAMP4-204ENST00000414057 SMC3Q9UQE7 1217 aa19.5■□□□□ 0.71
SCAMP4-204ENST00000414057 KLRF2D3W0D1 207 aa19.49■□□□□ 0.71
SCAMP4-204ENST00000414057 RCAN1P53805 252 aa19.49■□□□□ 0.71
SCAMP4-204ENST00000414057 SMAD3P84022 425 aaKnown RBP19.49■□□□□ 0.71
SCAMP4-204ENST00000414057 PPIGQ13427 754 aaKnown RBP eCLIP19.49■□□□□ 0.715e-11■□□□□ 9.3
SCAMP4-204ENST00000414057 TTLL4Q14679 1199 aa19.49■□□□□ 0.71
SCAMP4-204ENST00000414057 TMEM67Q5HYA8 995 aa19.49■□□□□ 0.71
SCAMP4-204ENST00000414057 ZNF697Q5TEC3 545 aa19.49■□□□□ 0.71
SCAMP4-204ENST00000414057 Q7L0L9 218 aa19.49■□□□□ 0.71
SCAMP4-204ENST00000414057 NSUN6Q8TEA1 469 aaKnown RBP19.49■□□□□ 0.71
SCAMP4-204ENST00000414057 MTMR10Q9NXD2 777 aa19.49■□□□□ 0.71
SCAMP4-204ENST00000414057 PDIA3P30101 505 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms