RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 AFAP1L2Q8N4X5 818 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 GJA10Q969M2 543 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 NT5C1BQ96P26 610 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 ZNF341Q9BYN7 854 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 ANKFY1Q9P2R3 1169 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 PSAPP07602 524 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 MFAP3P55082 362 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 SARNPP82979 210 aaKnown RBP18.94■□□□□ 0.62
PHRF1-202ENST00000413872 ALCAMQ13740 583 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 NECTIN1Q15223 517 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 SRGAP1Q7Z6B7 1085 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 RIPOR2Q9Y4F9 1068 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 H2AFZP0C0S5 128 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 PSMC2P35998 433 aaKnown RBP18.94■□□□□ 0.62
PHRF1-202ENST00000413872 PTK2Q05397 1052 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 H2AFVQ71UI9 128 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 KMT5AQ9NQR1 393 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 AKT3Q9Y243 479 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 ECE2O60344 883 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 SORBS3O60504 671 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 RNASE9P60153 205 aaKnown RBP18.94■□□□□ 0.62
PHRF1-202ENST00000413872 ARL6IP4Q66PJ3 421 aaKnown RBP18.94■□□□□ 0.62
PHRF1-202ENST00000413872 C2orf69Q8N8R5 385 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 CERKQ8TCT0 537 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 CEP170P1Q96L14 293 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 WDR19Q8NEZ3 1342 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 PNPLA6Q8IY17 1366 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 GIPC1O14908 333 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 SLFN14P0C7P3 912 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 RC3H1Q5TC82 1133 aaKnown RBP18.94■□□□□ 0.62
PHRF1-202ENST00000413872 APOBEC3FQ8IUX4 373 aaKnown RBP18.94■□□□□ 0.62
PHRF1-202ENST00000413872 HAUS4Q9H6D7 363 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 SUGT1Q9Y2Z0 365 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 NUB1Q9Y5A7 615 aa18.94■□□□□ 0.62
PHRF1-202ENST00000413872 MIGA2Q7L4E1 593 aa18.93■□□□□ 0.62
PHRF1-202ENST00000413872 SP8Q8IXZ3 490 aa18.93■□□□□ 0.62
PHRF1-202ENST00000413872 COA7Q96BR5 231 aa18.93■□□□□ 0.62
PHRF1-202ENST00000413872 ATP2C2O75185 946 aa18.93■□□□□ 0.62
PHRF1-202ENST00000413872 CACTINQ8WUQ7 758 aaKnown RBP18.93■□□□□ 0.62
PHRF1-202ENST00000413872 ANKRD36BP1Q96IX9 119 aa18.93■□□□□ 0.62
PHRF1-202ENST00000413872 VPS18Q9P253 973 aa18.93■□□□□ 0.62
PHRF1-202ENST00000413872 PCDHA5Q9Y5H7 936 aa18.93■□□□□ 0.62
PHRF1-202ENST00000413872 PIK3CAP42336 1068 aa18.93■□□□□ 0.62
PHRF1-202ENST00000413872 PSMD2Q13200 908 aa18.93■□□□□ 0.62
PHRF1-202ENST00000413872 RASGRP4Q8TDF6 673 aa18.93■□□□□ 0.62
PHRF1-202ENST00000413872 GRK7Q8WTQ7 553 aa18.93■□□□□ 0.62
PHRF1-202ENST00000413872 MYL7Q01449 175 aa18.93■□□□□ 0.62
PHRF1-202ENST00000413872 TRIM50Q86XT4 487 aa18.93■□□□□ 0.62
PHRF1-202ENST00000413872 INO80B-WBP1J3KQ70 363 aa18.92■□□□□ 0.62
PHRF1-202ENST00000413872 CRCPO75575 148 aa18.92■□□□□ 0.62
PHRF1-202ENST00000413872 POLR2FP61218 127 aaKnown RBP18.92■□□□□ 0.62
PHRF1-202ENST00000413872 KRT81Q14533 505 aa18.92■□□□□ 0.62
PHRF1-202ENST00000413872 EPHA10Q5JZY3 1008 aa18.92■□□□□ 0.62
PHRF1-202ENST00000413872 CARD6Q9BX69 1037 aa18.92■□□□□ 0.62
PHRF1-202ENST00000413872 INO80BQ9C086 356 aaPredicted RBP18.92■□□□□ 0.62
PHRF1-202ENST00000413872 HOXC10Q9NYD6 342 aa18.92■□□□□ 0.62
PHRF1-202ENST00000413872 RCOR1Q9UKL0 485 aa18.92■□□□□ 0.62
PHRF1-202ENST00000413872 ZNF827Q17R98 1081 aa18.92■□□□□ 0.62
PHRF1-202ENST00000413872 FANCLQ9NW38 375 aa18.92■□□□□ 0.62
PHRF1-202ENST00000413872 SAR1BQ9Y6B6 198 aa18.92■□□□□ 0.62
PHRF1-202ENST00000413872 GH2P01242 217 aa18.92■□□□□ 0.62
PHRF1-202ENST00000413872 NR2F2P24468 414 aa18.92■□□□□ 0.62
PHRF1-202ENST00000413872 UBXN2AP68543 259 aa18.92■□□□□ 0.62
PHRF1-202ENST00000413872 FKBP3Q00688 224 aaKnown RBP18.92■□□□□ 0.62
PHRF1-202ENST00000413872 GABPAQ06546 454 aa18.92■□□□□ 0.62
PHRF1-202ENST00000413872 SMC1BQ8NDV3 1235 aa18.92■□□□□ 0.62
PHRF1-202ENST00000413872 CCDC110Q8TBZ0 833 aa18.92■□□□□ 0.62
PHRF1-202ENST00000413872 TRIM11Q96F44 468 aa18.92■□□□□ 0.62
PHRF1-202ENST00000413872 IFT122Q9HBG6 1241 aa18.92■□□□□ 0.62
PHRF1-202ENST00000413872 RNF8O76064 485 aa18.92■□□□□ 0.62
PHRF1-202ENST00000413872 NSFP46459 744 aaKnown RBP18.92■□□□□ 0.62
PHRF1-202ENST00000413872 SH3RF3Q8TEJ3 882 aaPredicted RBP18.92■□□□□ 0.62
PHRF1-202ENST00000413872 ANAPC4Q9UJX5 808 aa18.92■□□□□ 0.62
PHRF1-202ENST00000413872 COPB1P53618 953 aaKnown RBP18.91■□□□□ 0.62
PHRF1-202ENST00000413872 LONRF2Q1L5Z9 754 aa18.91■□□□□ 0.62
PHRF1-202ENST00000413872 KLHL7Q8IXQ5 586 aa18.91■□□□□ 0.62
PHRF1-202ENST00000413872 CELF1Q92879 486 aaKnown RBP18.91■□□□□ 0.62
PHRF1-202ENST00000413872 P2RX5Q93086 422 aa18.91■□□□□ 0.62
PHRF1-202ENST00000413872 CNOT6LQ96LI5 555 aaKnown RBP18.91■□□□□ 0.62
PHRF1-202ENST00000413872 ZHX1Q9UKY1 873 aaPredicted RBP18.91■□□□□ 0.62
PHRF1-202ENST00000413872 MROH7-TTC4A0A0A0MT08 1334 aa18.91■□□□□ 0.62
PHRF1-202ENST00000413872 ADKP55263 362 aaKnown RBP18.91■□□□□ 0.62
PHRF1-202ENST00000413872 SURF1Q15526 300 aa18.91■□□□□ 0.62
PHRF1-202ENST00000413872 LINC00301Q8NCQ3 95 aa18.91■□□□□ 0.62
PHRF1-202ENST00000413872 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.91■□□□□ 0.62
PHRF1-202ENST00000413872 HYOU1Q9Y4L1 999 aa18.91■□□□□ 0.62
PHRF1-202ENST00000413872 DLC1Q96QB1 1528 aa18.91■□□□□ 0.62
PHRF1-202ENST00000413872 CYP2D7A0A087X1C5 515 aa18.91■□□□□ 0.62
PHRF1-202ENST00000413872 WHAMMP3Q1A5X7 153 aa18.91■□□□□ 0.62
PHRF1-202ENST00000413872 ERCC6LQ2NKX8 1250 aa18.91■□□□□ 0.62
PHRF1-202ENST00000413872 FYB2Q5VWT5 728 aa18.91■□□□□ 0.62
PHRF1-202ENST00000413872 ANO3Q9BYT9 981 aa18.91■□□□□ 0.62
PHRF1-202ENST00000413872 ABT1Q9ULW3 272 aaKnown RBP18.91■□□□□ 0.62
PHRF1-202ENST00000413872 CPDO75976 1380 aa18.91■□□□□ 0.62
PHRF1-202ENST00000413872 ABCB4P21439 1286 aa18.91■□□□□ 0.62
PHRF1-202ENST00000413872 GEN1Q17RS7 908 aa18.91■□□□□ 0.62
PHRF1-202ENST00000413872 SYNE4Q8N205 404 aa18.91■□□□□ 0.62
PHRF1-202ENST00000413872 FDX1P10109 184 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 ALX1Q15699 326 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 RSAD2Q8WXG1 361 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms