RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 RAB30Q15771 203 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 CCDC85BQ15834 202 aaPredicted RBP9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 GNASQ5JWF2 1037 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 CCDC174Q6PII3 467 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 CCDC144CPQ8IYA2 1237 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 KBTBD3Q8NAB2 608 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 PI4K2BQ8TCG2 481 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 ATXN2LQ8WWM7 1075 aaKnown RBP9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 HERVK_113Q902F9 699 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 KIFC2Q96AC6 838 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 VTI1AQ96AJ9 217 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 ASB2Q96Q27 587 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 ABHD16BQ9H3Z7 469 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 SPC25Q9HBM1 224 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 SLC38A10Q9HBR0 1119 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 EPB41L4AQ9HCS5 686 aaPredicted RBP9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 IL23AQ9NPF7 189 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 HOMER2Q9NSB8 354 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 NYAP2Q9P242 653 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 USTQ9Y2C2 406 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 DDX49Q9Y6V7 483 aaKnown RBP9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 TRIP12Q14669 1992 aaPredicted RBP9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 SALL3Q9BXA9 1300 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 PLIN4Q96Q06 1357 aa9.79□□□□□ -0.84
UPF3AP1-201ENST00000413731 TRIM6-TRIM34B2RNG4 842 aa9.79□□□□□ -0.84
UPF3AP1-201ENST00000413731 C3orf80F5H4A9 247 aa9.79□□□□□ -0.84
UPF3AP1-201ENST00000413731 SMAPO00193 183 aa9.79□□□□□ -0.84
UPF3AP1-201ENST00000413731 IGFBP4P22692 258 aa9.79□□□□□ -0.84
UPF3AP1-201ENST00000413731 RBM25P49756 843 aaKnown RBP9.79□□□□□ -0.84
UPF3AP1-201ENST00000413731 RABGGTBP53611 331 aa9.79□□□□□ -0.84
UPF3AP1-201ENST00000413731 PDE1AP54750 535 aa9.79□□□□□ -0.84
UPF3AP1-201ENST00000413731 CNTN2Q02246 1040 aa9.79□□□□□ -0.84
UPF3AP1-201ENST00000413731 CTDSPL2Q05D32 466 aa9.79□□□□□ -0.84
UPF3AP1-201ENST00000413731 LRRFIP1Q32MZ4 808 aaKnown RBP9.79□□□□□ -0.84
UPF3AP1-201ENST00000413731 CXCL17Q6UXB2 119 aa9.79□□□□□ -0.84
UPF3AP1-201ENST00000413731 TLK2Q86UE8 772 aa9.79□□□□□ -0.84
UPF3AP1-201ENST00000413731 ANKRD35Q8N283 1001 aa9.79□□□□□ -0.84
UPF3AP1-201ENST00000413731 PRPF38AQ8NAV1 312 aaKnown RBP9.79□□□□□ -0.84
UPF3AP1-201ENST00000413731 CEP95Q96GE4 821 aa9.79□□□□□ -0.84
UPF3AP1-201ENST00000413731 NECAB3Q96P71 396 aaPredicted RBP9.79□□□□□ -0.84
UPF3AP1-201ENST00000413731 UHRF1Q96T88 793 aaPredicted RBP9.79□□□□□ -0.84
UPF3AP1-201ENST00000413731 HIPK3Q9H422 1215 aa9.79□□□□□ -0.84
UPF3AP1-201ENST00000413731 MSRAQ9UJ68 235 aa9.79□□□□□ -0.84
UPF3AP1-201ENST00000413731 LHX6Q9UPM6 363 aa9.79□□□□□ -0.84
UPF3AP1-201ENST00000413731 CTDP1Q9Y5B0 961 aaPredicted RBP9.79□□□□□ -0.84
UPF3AP1-201ENST00000413731 GSG1L2A8MUP6 293 aa9.78□□□□□ -0.84
UPF3AP1-201ENST00000413731 MINDY4BA8MYZ0 360 aa9.78□□□□□ -0.84
UPF3AP1-201ENST00000413731 HOXA2O43364 376 aa9.78□□□□□ -0.84
UPF3AP1-201ENST00000413731 ZBED4O75132 1171 aa9.78□□□□□ -0.84
UPF3AP1-201ENST00000413731 PRDM1O75626 825 aa9.78□□□□□ -0.84
UPF3AP1-201ENST00000413731 ZFYP08048 801 aaPredicted RBP9.78□□□□□ -0.84
UPF3AP1-201ENST00000413731 MYOGP15173 224 aa9.78□□□□□ -0.84
UPF3AP1-201ENST00000413731 CCL23P55773 120 aa9.78□□□□□ -0.84
UPF3AP1-201ENST00000413731 NKX3-2P78367 333 aa9.78□□□□□ -0.84
UPF3AP1-201ENST00000413731 MRPS5P82675 430 aaKnown RBP9.78□□□□□ -0.84
UPF3AP1-201ENST00000413731 SBK1Q52WX2 424 aa9.78□□□□□ -0.84
UPF3AP1-201ENST00000413731 OTOP2Q7RTS6 562 aa9.78□□□□□ -0.84
UPF3AP1-201ENST00000413731 MICALL1Q8N3F8 863 aa9.78□□□□□ -0.84
UPF3AP1-201ENST00000413731 FAM133AQ8N9E0 248 aa9.78□□□□□ -0.84
UPF3AP1-201ENST00000413731 SLC43A3Q8NBI5 491 aa9.78□□□□□ -0.84
UPF3AP1-201ENST00000413731 CHST13Q8NET6 341 aa9.78□□□□□ -0.84
UPF3AP1-201ENST00000413731 STRBPQ96SI9 672 aaKnown RBP9.78□□□□□ -0.84
UPF3AP1-201ENST00000413731 WNT8AQ9H1J5 351 aa9.78□□□□□ -0.84
UPF3AP1-201ENST00000413731 CLIP2Q9UDT6 1046 aa9.78□□□□□ -0.84
UPF3AP1-201ENST00000413731 FBXO40Q9UH90 709 aa9.78□□□□□ -0.84
UPF3AP1-201ENST00000413731 GNEQ9Y223 722 aaKnown RBP9.78□□□□□ -0.84
UPF3AP1-201ENST00000413731 GRIN2DO15399 1336 aa9.78□□□□□ -0.84
UPF3AP1-201ENST00000413731 SOWAHBA6NEL2 793 aa9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 M0R2C6 588 aa9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 RNF113AO15541 343 aaKnown RBP9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 B4GALT4O60513 344 aa9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 OAZ1P54368 228 aa9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 PSMC6P62333 389 aa9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 TNFAIP2Q03169 654 aa9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 FSCN1Q16658 493 aaKnown RBP9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 NOL8Q76FK4 1167 aaKnown RBP9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 RASGRP2Q7LDG7 609 aa9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 FBXO16Q8IX29 292 aaPredicted RBP9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 GMCL1P1Q8NEA9 526 aa9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 APPBP2Q92624 585 aa9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 OSBP2Q969R2 916 aa9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 VWCEQ96DN2 955 aa9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 NOC4LQ9BVI4 516 aaKnown RBP9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 MTIF3Q9H2K0 278 aaKnown RBP9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 ACAD9Q9H845 621 aa9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 SLC28A3Q9HAS3 691 aa9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 MKNK2Q9HBH9 465 aa9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 A1CFQ9NQ94 594 aaKnown RBP9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 RNF146Q9NTX7 359 aa9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 FEM1BQ9UK73 627 aa9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 ISY1Q9ULR0 285 aaKnown RBP9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 BDP1A6H8Y1 2624 aa9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 ZNF536O15090 1300 aa9.77□□□□□ -0.85
UPF3AP1-201ENST00000413731 GPAA1O43292 621 aa9.76□□□□□ -0.85
UPF3AP1-201ENST00000413731 FGBP02675 491 aa9.76□□□□□ -0.85
UPF3AP1-201ENST00000413731 SMPD1P17405 629 aa9.76□□□□□ -0.85
UPF3AP1-201ENST00000413731 GCGRP47871 477 aa9.76□□□□□ -0.85
UPF3AP1-201ENST00000413731 TDO2P48775 406 aa9.76□□□□□ -0.85
UPF3AP1-201ENST00000413731 GUCA2AQ02747 115 aa9.76□□□□□ -0.85
UPF3AP1-201ENST00000413731 TFF2Q03403 129 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms