RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 LY6KQ17RY6 165 aa11.8□□□□□ -0.52
NCKIPSD-202ENST00000413374 TDHQ8IZJ6 230 aa11.8□□□□□ -0.52
NCKIPSD-202ENST00000413374 TMTC2Q8N394 836 aa11.8□□□□□ -0.52
NCKIPSD-202ENST00000413374 SRBD1Q8N5C6 995 aaKnown RBP11.8□□□□□ -0.52
NCKIPSD-202ENST00000413374 NSUN6Q8TEA1 469 aaKnown RBP11.8□□□□□ -0.52
NCKIPSD-202ENST00000413374 SLC12A7Q9Y666 1083 aa11.8□□□□□ -0.52
NCKIPSD-202ENST00000413374 ELP1O95163 1332 aa11.8□□□□□ -0.52
NCKIPSD-202ENST00000413374 A0A0U1RQG5 324 aaPredicted RBP11.79□□□□□ -0.52
NCKIPSD-202ENST00000413374 GCOM1H8Y6P7 765 aaPredicted RBP11.79□□□□□ -0.52
NCKIPSD-202ENST00000413374 DDAH1O94760 285 aa11.79□□□□□ -0.52
NCKIPSD-202ENST00000413374 ARIH2O95376 493 aa11.79□□□□□ -0.52
NCKIPSD-202ENST00000413374 NR3C2P08235 984 aa11.79□□□□□ -0.52
NCKIPSD-202ENST00000413374 POLR2MP0CAP2 368 aa11.79□□□□□ -0.52
NCKIPSD-202ENST00000413374 RAG1P15918 1043 aa11.79□□□□□ -0.52
NCKIPSD-202ENST00000413374 KIF5BP33176 963 aa11.79□□□□□ -0.52
NCKIPSD-202ENST00000413374 CDK7P50613 346 aa11.79□□□□□ -0.52
NCKIPSD-202ENST00000413374 ITGA7Q13683 1181 aa11.79□□□□□ -0.52
NCKIPSD-202ENST00000413374 PPP2R5BQ15173 497 aa11.79□□□□□ -0.52
NCKIPSD-202ENST00000413374 STXBP2Q15833 593 aa11.79□□□□□ -0.52
NCKIPSD-202ENST00000413374 SYNE3Q6ZMZ3 975 aa11.79□□□□□ -0.52
NCKIPSD-202ENST00000413374 RRP36Q96EU6 259 aaKnown RBP11.79□□□□□ -0.52
NCKIPSD-202ENST00000413374 PXMP2Q9NR77 195 aa11.79□□□□□ -0.52
NCKIPSD-202ENST00000413374 NAP1L2Q9ULW6 460 aaPredicted RBP11.79□□□□□ -0.52
NCKIPSD-202ENST00000413374 Q9Y3F1 56 aa11.79□□□□□ -0.52
NCKIPSD-202ENST00000413374 SMCHD1A6NHR9 2005 aa11.79□□□□□ -0.52
NCKIPSD-202ENST00000413374 LOC102724159A0A0B4J2E5 919 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 A0A1W2PPC1 479 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 LIFRP42702 1097 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 HSD17B4P51659 736 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 NKX3-2P78367 333 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 EXOSC10Q01780 885 aaKnown RBP11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 TTLL4Q14679 1199 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 PWP2Q15269 919 aaKnown RBP11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 SHHQ15465 462 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 C9orf50Q5SZB4 431 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 DHX32Q7L7V1 743 aaKnown RBP11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 ANKRD33Q7Z3H0 272 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 MICU3Q86XE3 530 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 FANCBQ8NB91 859 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 SCFD2Q8WU76 684 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 IWS1Q96ST2 819 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 MAP3K14Q99558 947 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 MTA3Q9BTC8 594 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 PPP1R12CQ9BZL4 782 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 TRPV6Q9H1D0 765 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 PPP4R2Q9NY27 417 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 BRPF3Q9ULD4 1205 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 LAMA4Q16363 1823 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 GRIN2DO15399 1336 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 PLXNA1Q9UIW2 1896 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 ALPK3Q96L96 1907 aa11.78□□□□□ -0.52
NCKIPSD-202ENST00000413374 KIAA0355O15063 1070 aa11.77□□□□□ -0.53
NCKIPSD-202ENST00000413374 EIF3JO75822 258 aaKnown RBP11.77□□□□□ -0.53
NCKIPSD-202ENST00000413374 CABYRO75952 493 aa11.77□□□□□ -0.53
NCKIPSD-202ENST00000413374 CALM1P0DP23 149 aa11.77□□□□□ -0.53
NCKIPSD-202ENST00000413374 CALM2P0DP24 149 aa11.77□□□□□ -0.53
NCKIPSD-202ENST00000413374 CALM3P0DP25 149 aa11.77□□□□□ -0.53
NCKIPSD-202ENST00000413374 GNAQP50148 359 aa11.77□□□□□ -0.53
NCKIPSD-202ENST00000413374 CPT1AP50416 773 aa11.77□□□□□ -0.53
NCKIPSD-202ENST00000413374 EPHB4P54760 987 aa11.77□□□□□ -0.53
NCKIPSD-202ENST00000413374 FGD1P98174 961 aa11.77□□□□□ -0.53
NCKIPSD-202ENST00000413374 IL31RAQ8NI17 732 aa11.77□□□□□ -0.53
NCKIPSD-202ENST00000413374 AFG1LQ8WV93 481 aa11.77□□□□□ -0.53
NCKIPSD-202ENST00000413374 JAKMIP1Q96N16 626 aaKnown RBP11.77□□□□□ -0.53
NCKIPSD-202ENST00000413374 TOX2Q96NM4 488 aa11.77□□□□□ -0.53
NCKIPSD-202ENST00000413374 PDCD2LQ9BRP1 358 aa11.77□□□□□ -0.53
NCKIPSD-202ENST00000413374 RTEL1Q9NZ71 1219 aa11.77□□□□□ -0.53
NCKIPSD-202ENST00000413374 SEC63Q9UGP8 760 aaKnown RBP11.77□□□□□ -0.53
NCKIPSD-202ENST00000413374 KLF18A0A0U1RQI7 1052 aa11.76□□□□□ -0.53
NCKIPSD-202ENST00000413374 NKRFO15226 690 aaKnown RBP eCLIP11.76□□□□□ -0.53
NCKIPSD-202ENST00000413374 TLR3O15455 904 aaKnown RBP11.76□□□□□ -0.53
NCKIPSD-202ENST00000413374 PURAQ00577 322 aaKnown RBP11.76□□□□□ -0.53
NCKIPSD-202ENST00000413374 TRAF1Q13077 416 aa11.76□□□□□ -0.53
NCKIPSD-202ENST00000413374 KRT32Q14532 448 aa11.76□□□□□ -0.53
NCKIPSD-202ENST00000413374 PGM5Q15124 567 aa11.76□□□□□ -0.53
NCKIPSD-202ENST00000413374 TSGA10IPQ3SY00 556 aa11.76□□□□□ -0.53
NCKIPSD-202ENST00000413374 FAM47CQ5HY64 1035 aa11.76□□□□□ -0.53
NCKIPSD-202ENST00000413374 CCDC62Q6P9F0 684 aa11.76□□□□□ -0.53
NCKIPSD-202ENST00000413374 USP17L6PQ6QN14 398 aa11.76□□□□□ -0.53
NCKIPSD-202ENST00000413374 FAM126BQ8IXS8 530 aa11.76□□□□□ -0.53
NCKIPSD-202ENST00000413374 GPKOWQ92917 476 aaPredicted RBP eCLIP11.76□□□□□ -0.53
NCKIPSD-202ENST00000413374 LZTS2Q9BRK4 669 aa11.76□□□□□ -0.53
NCKIPSD-202ENST00000413374 SPZ1Q9BXG8 430 aa11.76□□□□□ -0.53
NCKIPSD-202ENST00000413374 MAF1Q9H063 256 aa11.76□□□□□ -0.53
NCKIPSD-202ENST00000413374 POLR3EQ9NVU0 708 aa11.76□□□□□ -0.53
NCKIPSD-202ENST00000413374 DDX41Q9UJV9 622 aaKnown RBP11.76□□□□□ -0.53
NCKIPSD-202ENST00000413374 SNX14Q9Y5W7 946 aa11.76□□□□□ -0.53
NCKIPSD-202ENST00000413374 MRVI1Q9Y6F6 885 aa11.76□□□□□ -0.53
NCKIPSD-202ENST00000413374 FRMPD3Q5JV73 1810 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 ZBTB43O43298 467 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 B4GALT4O60513 344 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 RGS20O76081 388 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 TIMP1P01033 207 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 GH1P01241 217 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 CD4P01730 458 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 CENPBP07199 599 aaPredicted RBP11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 ACRP10323 421 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 CYP2C18P33260 490 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 HSPA4P34932 840 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 CCL23P55773 120 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms