RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 MOXD2PA6NHM9 499 aa21.8■■□□□ 1.08
TRIM56-202ENST00000412507 DYNC1LI2O43237 492 aaPredicted RBP21.8■■□□□ 1.08
TRIM56-202ENST00000412507 ASGR1P07306 291 aa21.8■■□□□ 1.08
TRIM56-202ENST00000412507 EIF2AK2P19525 551 aaKnown RBP21.8■■□□□ 1.08
TRIM56-202ENST00000412507 HOXA13P31271 388 aaPredicted RBP21.8■■□□□ 1.08
TRIM56-202ENST00000412507 SNX17Q15036 470 aa21.8■■□□□ 1.08
TRIM56-202ENST00000412507 DUSP28Q4G0W2 176 aa21.8■■□□□ 1.08
TRIM56-202ENST00000412507 ARHGEF16Q5VV41 709 aa21.8■■□□□ 1.08
TRIM56-202ENST00000412507 BLOC1S2Q6QNY1 142 aa21.8■■□□□ 1.08
TRIM56-202ENST00000412507 TMTC3Q6ZXV5 915 aa21.8■■□□□ 1.08
TRIM56-202ENST00000412507 PCSK9Q8NBP7 692 aaKnown RBP21.8■■□□□ 1.08
TRIM56-202ENST00000412507 USP26Q9BXU7 913 aa21.8■■□□□ 1.08
TRIM56-202ENST00000412507 AP5M1Q9H0R1 490 aa21.8■■□□□ 1.08
TRIM56-202ENST00000412507 MAP3K20Q9NYL2 800 aaKnown RBP21.8■■□□□ 1.08
TRIM56-202ENST00000412507 SEC63Q9UGP8 760 aaKnown RBP21.8■■□□□ 1.08
TRIM56-202ENST00000412507 KLF18A0A0U1RQI7 1052 aa21.79■■□□□ 1.08
TRIM56-202ENST00000412507 ZBTB43O43298 467 aa21.79■■□□□ 1.08
TRIM56-202ENST00000412507 EPB41L2O43491 1005 aaKnown RBP21.79■■□□□ 1.08
TRIM56-202ENST00000412507 NKX3-2P78367 333 aa21.79■■□□□ 1.08
TRIM56-202ENST00000412507 FGD1P98174 961 aa21.79■■□□□ 1.08
TRIM56-202ENST00000412507 TRIM60Q495X7 471 aa21.79■■□□□ 1.08
TRIM56-202ENST00000412507 Q6ZUG5 572 aa21.79■■□□□ 1.08
TRIM56-202ENST00000412507 STARD7Q9NQZ5 370 aa21.79■■□□□ 1.08
TRIM56-202ENST00000412507 PXMP2Q9NR77 195 aa21.79■■□□□ 1.08
TRIM56-202ENST00000412507 hCG_1642624A0A1W2PR95 340 aa21.78■■□□□ 1.08
TRIM56-202ENST00000412507 GCOM1H8Y6P7 765 aaPredicted RBP21.78■■□□□ 1.08
TRIM56-202ENST00000412507 POLR2MP0CAP2 368 aa21.78■■□□□ 1.08
TRIM56-202ENST00000412507 CASTP20810 708 aaKnown RBP21.78■■□□□ 1.08
TRIM56-202ENST00000412507 SAMD3Q8N6K7 520 aa21.78■■□□□ 1.08
TRIM56-202ENST00000412507 IWS1Q96ST2 819 aa21.78■■□□□ 1.08
TRIM56-202ENST00000412507 NAP1L2Q9ULW6 460 aaPredicted RBP21.78■■□□□ 1.08
TRIM56-202ENST00000412507 Q9Y3F1 56 aa21.78■■□□□ 1.08
TRIM56-202ENST00000412507 RPS6KB1P23443 525 aa21.77■■□□□ 1.08
TRIM56-202ENST00000412507 PSMA5P28066 241 aa21.77■■□□□ 1.08
TRIM56-202ENST00000412507 APOBRQ0VD83 1088 aa21.77■■□□□ 1.08
TRIM56-202ENST00000412507 STXBP2Q15833 593 aa21.77■■□□□ 1.08
TRIM56-202ENST00000412507 FSCN1Q16658 493 aaKnown RBP21.77■■□□□ 1.08
TRIM56-202ENST00000412507 RTN1Q16799 776 aa21.77■■□□□ 1.08
TRIM56-202ENST00000412507 C1orf53Q5VUE5 145 aa21.77■■□□□ 1.08
TRIM56-202ENST00000412507 SCFD2Q8WU76 684 aa21.77■■□□□ 1.08
TRIM56-202ENST00000412507 GLT1D1Q96MS3 346 aa21.77■■□□□ 1.08
TRIM56-202ENST00000412507 RBM28Q9NW13 759 aaKnown RBP21.77■■□□□ 1.08
TRIM56-202ENST00000412507 GOLGA8AA7E2F4 631 aa21.76■■□□□ 1.07
TRIM56-202ENST00000412507 GOLGA8BA8MQT2 603 aa21.76■■□□□ 1.07
TRIM56-202ENST00000412507 NR3C2P08235 984 aa21.76■■□□□ 1.07
TRIM56-202ENST00000412507 PPP2R5BQ15173 497 aa21.76■■□□□ 1.07
TRIM56-202ENST00000412507 HABP4Q5JVS0 413 aaKnown RBP21.76■■□□□ 1.07
TRIM56-202ENST00000412507 SEPT14Q6ZU15 432 aa21.76■■□□□ 1.07
TRIM56-202ENST00000412507 FCHSD1Q86WN1 690 aa21.76■■□□□ 1.07
TRIM56-202ENST00000412507 BRF1Q92994 677 aa21.76■■□□□ 1.07
TRIM56-202ENST00000412507 VTI1AQ96AJ9 217 aa21.76■■□□□ 1.07
TRIM56-202ENST00000412507 RBM27Q9P2N5 1060 aaKnown RBP21.76■■□□□ 1.07
TRIM56-202ENST00000412507 CNTNAP5Q8WYK1 1306 aa21.76■■□□□ 1.07
TRIM56-202ENST00000412507 ARIH2O95376 493 aa21.75■■□□□ 1.07
TRIM56-202ENST00000412507 TXNP10599 105 aaKnown RBP21.75■■□□□ 1.07
TRIM56-202ENST00000412507 MYCLP12524 364 aaPredicted RBP21.75■■□□□ 1.07
TRIM56-202ENST00000412507 TLE2Q04725 743 aa21.75■■□□□ 1.07
TRIM56-202ENST00000412507 TTLL4Q14679 1199 aa21.75■■□□□ 1.07
TRIM56-202ENST00000412507 OR6J1Q8NGC5 347 aa21.75■■□□□ 1.07
TRIM56-202ENST00000412507 COPS5Q92905 334 aa21.75■■□□□ 1.07
TRIM56-202ENST00000412507 PDCD2LQ9BRP1 358 aa21.75■■□□□ 1.07
TRIM56-202ENST00000412507 PRO3102Q9H379 93 aa21.75■■□□□ 1.07
TRIM56-202ENST00000412507 ELP1O95163 1332 aa21.75■■□□□ 1.07
TRIM56-202ENST00000412507 SCN10AQ9Y5Y9 1956 aa21.74■■□□□ 1.07
TRIM56-202ENST00000412507 CDC27P30260 824 aa21.74■■□□□ 1.07
TRIM56-202ENST00000412507 MAGEA10P43363 369 aaPredicted RBP21.74■■□□□ 1.07
TRIM56-202ENST00000412507 PGM5Q15124 567 aa21.74■■□□□ 1.07
TRIM56-202ENST00000412507 CXCL17Q6UXB2 119 aa21.74■■□□□ 1.07
TRIM56-202ENST00000412507 IL31RAQ8NI17 732 aa21.74■■□□□ 1.07
TRIM56-202ENST00000412507 GDF15Q99988 308 aa21.74■■□□□ 1.07
TRIM56-202ENST00000412507 PRDM5Q9NQX1 630 aaPredicted RBP21.74■■□□□ 1.07
TRIM56-202ENST00000412507 FAM217BQ9NTX9 383 aaPredicted RBP21.74■■□□□ 1.07
TRIM56-202ENST00000412507 NKRFO15226 690 aaKnown RBP eCLIP21.73■■□□□ 1.07
TRIM56-202ENST00000412507 ZEB2O60315 1214 aa21.73■■□□□ 1.07
TRIM56-202ENST00000412507 PQBP1O60828 265 aaKnown RBP21.73■■□□□ 1.07
TRIM56-202ENST00000412507 EIF3JO75822 258 aaKnown RBP21.73■■□□□ 1.07
TRIM56-202ENST00000412507 RCAN1P53805 252 aa21.73■■□□□ 1.07
TRIM56-202ENST00000412507 FUT2Q10981 343 aa21.73■■□□□ 1.07
TRIM56-202ENST00000412507 CCDC62Q6P9F0 684 aa21.73■■□□□ 1.07
TRIM56-202ENST00000412507 USP17L6PQ6QN14 398 aa21.73■■□□□ 1.07
TRIM56-202ENST00000412507 GPKOWQ92917 476 aaPredicted RBP eCLIP21.73■■□□□ 1.07
TRIM56-202ENST00000412507 AGXT2Q9BYV1 514 aa21.73■■□□□ 1.07
TRIM56-202ENST00000412507 PDLIM7Q9NR12 457 aa21.73■■□□□ 1.07
TRIM56-202ENST00000412507 PRKAG2Q9UGJ0 569 aa21.73■■□□□ 1.07
TRIM56-202ENST00000412507 RANBP2P49792 3224 aaKnown RBP21.73■■□□□ 1.07
TRIM56-202ENST00000412507 A0A0U1RQG5 324 aaPredicted RBP21.72■■□□□ 1.07
TRIM56-202ENST00000412507 ADD1P35611 737 aaKnown RBP21.72■■□□□ 1.07
TRIM56-202ENST00000412507 METAP2P50579 478 aaKnown RBP eCLIP21.72■■□□□ 1.07
TRIM56-202ENST00000412507 MDM2Q00987 491 aaPredicted RBP21.72■■□□□ 1.07
TRIM56-202ENST00000412507 LY6KQ17RY6 165 aa21.72■■□□□ 1.07
TRIM56-202ENST00000412507 RUFY3Q7L099 469 aa21.72■■□□□ 1.07
TRIM56-202ENST00000412507 SH3RF1Q7Z6J0 888 aa21.72■■□□□ 1.07
TRIM56-202ENST00000412507 FBXL16Q8N461 479 aa21.72■■□□□ 1.07
TRIM56-202ENST00000412507 SMARCC2Q8TAQ2 1214 aa21.72■■□□□ 1.07
TRIM56-202ENST00000412507 CUL5Q93034 780 aa21.72■■□□□ 1.07
TRIM56-202ENST00000412507 ZFP91Q96JP5 570 aaPredicted RBP21.72■■□□□ 1.07
TRIM56-202ENST00000412507 ZSWIM6Q9HCJ5 1215 aa21.72■■□□□ 1.07
TRIM56-202ENST00000412507 MEIS2O14770 477 aa21.71■■□□□ 1.07
TRIM56-202ENST00000412507 HEATR3Q7Z4Q2 680 aa21.71■■□□□ 1.07
TRIM56-202ENST00000412507 VSIG10LQ86VR7 867 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms