RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 WWC2Q6AWC2 1192 aa4.38□□□□□ -1.71
HMGB3P2-201ENST00000411913 RCSD1Q6JBY9 416 aa4.38□□□□□ -1.71
HMGB3P2-201ENST00000411913 ZNF585AQ6P3V2 769 aa4.38□□□□□ -1.71
HMGB3P2-201ENST00000411913 CD300LDQ6UXZ3 194 aa4.38□□□□□ -1.71
HMGB3P2-201ENST00000411913 ETV3LQ6ZN32 361 aa4.38□□□□□ -1.71
HMGB3P2-201ENST00000411913 STK32CQ86UX6 486 aa4.38□□□□□ -1.71
HMGB3P2-201ENST00000411913 SYT3Q9BQG1 590 aa4.38□□□□□ -1.71
HMGB3P2-201ENST00000411913 JADE2Q9NQC1 790 aa4.38□□□□□ -1.71
HMGB3P2-201ENST00000411913 PPP4R1LQ9P1A2 415 aa4.38□□□□□ -1.71
HMGB3P2-201ENST00000411913 SIT1Q9Y3P8 196 aa4.38□□□□□ -1.71
HMGB3P2-201ENST00000411913 CYP1A1P04798 512 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P2-201ENST00000411913 ACRP10323 421 aa4.37□□□□□ -1.71
HMGB3P2-201ENST00000411913 SEPHS1P49903 392 aa4.37□□□□□ -1.71
HMGB3P2-201ENST00000411913 TCEAL1Q15170 157 aa4.37□□□□□ -1.71
HMGB3P2-201ENST00000411913 ZC3H18Q86VM9 953 aaKnown RBP4.37□□□□□ -1.71
HMGB3P2-201ENST00000411913 CIR1Q86X95 450 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P2-201ENST00000411913 CPNE8Q86YQ8 564 aa4.37□□□□□ -1.71
HMGB3P2-201ENST00000411913 ZNF341Q9BYN7 854 aa4.37□□□□□ -1.71
HMGB3P2-201ENST00000411913 GGT7Q9UJ14 662 aa4.37□□□□□ -1.71
HMGB3P2-201ENST00000411913 ING1Q9UK53 422 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P2-201ENST00000411913 DIS3Q9Y2L1 958 aaKnown RBP4.37□□□□□ -1.71
HMGB3P2-201ENST00000411913 ZNF451Q9Y4E5 1061 aa4.37□□□□□ -1.71
HMGB3P2-201ENST00000411913 B4GALT3O60512 393 aa4.36□□□□□ -1.71
HMGB3P2-201ENST00000411913 PPP1R11O60927 126 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P2-201ENST00000411913 NTRK1P04629 796 aa4.36□□□□□ -1.71
HMGB3P2-201ENST00000411913 PDIA4P13667 645 aaKnown RBP4.36□□□□□ -1.71
HMGB3P2-201ENST00000411913 TGFB2P61812 414 aa4.36□□□□□ -1.71
HMGB3P2-201ENST00000411913 PRAMEF18Q5VWM3 479 aa4.36□□□□□ -1.71
HMGB3P2-201ENST00000411913 PPFIBP1Q86W92 1011 aa4.36□□□□□ -1.71
HMGB3P2-201ENST00000411913 FAM26EQ8N5C1 309 aa4.36□□□□□ -1.71
HMGB3P2-201ENST00000411913 RNF34Q969K3 372 aa4.36□□□□□ -1.71
HMGB3P2-201ENST00000411913 MTA3Q9BTC8 594 aa4.36□□□□□ -1.71
HMGB3P2-201ENST00000411913 AP5M1Q9H0R1 490 aa4.36□□□□□ -1.71
HMGB3P2-201ENST00000411913 CD248Q9HCU0 757 aa4.36□□□□□ -1.71
HMGB3P2-201ENST00000411913 ADAMTS1Q9UHI8 967 aa4.36□□□□□ -1.71
HMGB3P2-201ENST00000411913 TCAF1Q9Y4C2 921 aa4.36□□□□□ -1.71
HMGB3P2-201ENST00000411913 A0A087WZG4 1122 aa4.35□□□□□ -1.71
HMGB3P2-201ENST00000411913 C9orf118A6NHY6 69 aa4.35□□□□□ -1.71
HMGB3P2-201ENST00000411913 PATL2C9JE40 543 aaKnown RBP4.35□□□□□ -1.71
HMGB3P2-201ENST00000411913 STXBP3O00186 592 aa4.35□□□□□ -1.71
HMGB3P2-201ENST00000411913 AURKAO14965 403 aa4.35□□□□□ -1.71
HMGB3P2-201ENST00000411913 MUSKO15146 869 aa4.35□□□□□ -1.71
HMGB3P2-201ENST00000411913 NPHS1O60500 1241 aa4.35□□□□□ -1.71
HMGB3P2-201ENST00000411913 FUCA1P04066 466 aa4.35□□□□□ -1.71
HMGB3P2-201ENST00000411913 PAMP19021 973 aa4.35□□□□□ -1.71
HMGB3P2-201ENST00000411913 RBM10P98175 930 aaKnown RBP4.35□□□□□ -1.71
HMGB3P2-201ENST00000411913 DCP2Q8IU60 420 aaKnown RBP4.35□□□□□ -1.71
HMGB3P2-201ENST00000411913 SLITRK4Q8IW52 837 aa4.35□□□□□ -1.71
HMGB3P2-201ENST00000411913 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMGB3P2-201ENST00000411913 C11orf21Q9P2W6 132 aa4.35□□□□□ -1.71
HMGB3P2-201ENST00000411913 NPHP3-ACAD11A0A0J9YXS1 232 aa4.34□□□□□ -1.71
HMGB3P2-201ENST00000411913 GPR42O15529 346 aa4.34□□□□□ -1.71
HMGB3P2-201ENST00000411913 IMPDH2P12268 514 aa4.34□□□□□ -1.71
HMGB3P2-201ENST00000411913 SELENOPP49908 381 aa4.34□□□□□ -1.71
HMGB3P2-201ENST00000411913 ITGA1P56199 1179 aa4.34□□□□□ -1.71
HMGB3P2-201ENST00000411913 FHL2Q14192 279 aa4.34□□□□□ -1.71
HMGB3P2-201ENST00000411913 DPY19L1Q2PZI1 675 aa4.34□□□□□ -1.71
HMGB3P2-201ENST00000411913 SPDYAQ5MJ70 313 aa4.34□□□□□ -1.71
HMGB3P2-201ENST00000411913 ARHGEF18Q6ZSZ5 1173 aa4.34□□□□□ -1.71
HMGB3P2-201ENST00000411913 HS2ST1Q7LGA3 356 aa4.34□□□□□ -1.71
HMGB3P2-201ENST00000411913 ADCY4Q8NFM4 1077 aa4.34□□□□□ -1.71
HMGB3P2-201ENST00000411913 IGDCC4Q8TDY8 1250 aa4.34□□□□□ -1.71
HMGB3P2-201ENST00000411913 SEMA4AQ9H3S1 761 aa4.34□□□□□ -1.71
HMGB3P2-201ENST00000411913 L2HGDHQ9H9P8 463 aa4.34□□□□□ -1.71
HMGB3P2-201ENST00000411913 C2orf71A6NGG8 1288 aa4.33□□□□□ -1.72
HMGB3P2-201ENST00000411913 VAMP4O75379 141 aa4.33□□□□□ -1.72
HMGB3P2-201ENST00000411913 PPP2CBP62714 309 aa4.33□□□□□ -1.72
HMGB3P2-201ENST00000411913 PPP2CAP67775 309 aa4.33□□□□□ -1.72
HMGB3P2-201ENST00000411913 PRR31Q5SQ13 230 aa4.33□□□□□ -1.72
HMGB3P2-201ENST00000411913 FBXW10Q5XX13 1052 aa4.33□□□□□ -1.72
HMGB3P2-201ENST00000411913 UNC5AQ6ZN44 842 aa4.33□□□□□ -1.72
HMGB3P2-201ENST00000411913 DNERQ8NFT8 737 aa4.33□□□□□ -1.72
HMGB3P2-201ENST00000411913 FERD3LQ96RJ6 166 aa4.33□□□□□ -1.72
HMGB3P2-201ENST00000411913 TM9SF2Q99805 663 aa4.33□□□□□ -1.72
HMGB3P2-201ENST00000411913 MCMBPQ9BTE3 642 aa4.33□□□□□ -1.72
HMGB3P2-201ENST00000411913 TRAIPQ9BWF2 469 aa4.33□□□□□ -1.72
HMGB3P2-201ENST00000411913 NT5C1AQ9BXI3 368 aa4.33□□□□□ -1.72
HMGB3P2-201ENST00000411913 TMEM168Q9H0V1 697 aa4.33□□□□□ -1.72
HMGB3P2-201ENST00000411913 ZNRF3Q9ULT6 936 aa4.33□□□□□ -1.72
HMGB3P2-201ENST00000411913 BACE2Q9Y5Z0 518 aa4.33□□□□□ -1.72
HMGB3P2-201ENST00000411913 LTBP3Q9NS15 1303 aa4.32□□□□□ -1.72
HMGB3P2-201ENST00000411913 TRBV23OR9-2A0A075B6M9 112 aa4.32□□□□□ -1.72
HMGB3P2-201ENST00000411913 ZNF623O75123 536 aa4.32□□□□□ -1.72
HMGB3P2-201ENST00000411913 STAT5AP42229 794 aa4.32□□□□□ -1.72
HMGB3P2-201ENST00000411913 FBXO33Q7Z6M2 555 aa4.32□□□□□ -1.72
HMGB3P2-201ENST00000411913 ADAT2Q7Z6V5 191 aaKnown RBP4.32□□□□□ -1.72
HMGB3P2-201ENST00000411913 MIB1Q86YT6 1006 aa4.32□□□□□ -1.72
HMGB3P2-201ENST00000411913 TAB3Q8N5C8 712 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P2-201ENST00000411913 YIPF4Q9BSR8 244 aa4.32□□□□□ -1.72
HMGB3P2-201ENST00000411913 NGRNQ9NPE2 291 aaKnown RBP4.32□□□□□ -1.72
HMGB3P2-201ENST00000411913 MARCH2Q9P0N8 246 aa4.32□□□□□ -1.72
HMGB3P2-201ENST00000411913 WHRNQ9P202 907 aa4.32□□□□□ -1.72
HMGB3P2-201ENST00000411913 C7orf72A4D263 438 aa4.31□□□□□ -1.72
HMGB3P2-201ENST00000411913 NPIPB8E9PQR5 432 aa4.31□□□□□ -1.72
HMGB3P2-201ENST00000411913 ZNF28P17035 718 aa4.31□□□□□ -1.72
HMGB3P2-201ENST00000411913 IL13P35225 146 aa4.31□□□□□ -1.72
HMGB3P2-201ENST00000411913 EPHB4P54760 987 aa4.31□□□□□ -1.72
HMGB3P2-201ENST00000411913 NKX3-2P78367 333 aa4.31□□□□□ -1.72
HMGB3P2-201ENST00000411913 AMPD2Q01433 879 aa4.31□□□□□ -1.72
HMGB3P2-201ENST00000411913 TAGLNQ01995 201 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms