RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 A0A1W2PRG0 241 aa7.74□□□□□ -1.17
LINC00396-201ENST00000411690 LCHNA4D1U4 455 aa7.74□□□□□ -1.17
LINC00396-201ENST00000411690 MPHOSPH10O00566 681 aaKnown RBP7.74□□□□□ -1.17
LINC00396-201ENST00000411690 SUPT20HL2P0C7V6 817 aa7.74□□□□□ -1.17
LINC00396-201ENST00000411690 GUCY1A2P33402 732 aa7.74□□□□□ -1.17
LINC00396-201ENST00000411690 COPB2P35606 906 aa7.74□□□□□ -1.17
LINC00396-201ENST00000411690 NKX3-2P78367 333 aa7.74□□□□□ -1.17
LINC00396-201ENST00000411690 NNTQ13423 1086 aa7.74□□□□□ -1.17
LINC00396-201ENST00000411690 LINC01559Q495D7 138 aa7.74□□□□□ -1.17
LINC00396-201ENST00000411690 KIAA1755Q5JYT7 1200 aa7.74□□□□□ -1.17
LINC00396-201ENST00000411690 GORABQ5T7V8 394 aa7.74□□□□□ -1.17
LINC00396-201ENST00000411690 NOL8Q76FK4 1167 aaKnown RBP7.74□□□□□ -1.17
LINC00396-201ENST00000411690 TTC6Q86TZ1 520 aa7.74□□□□□ -1.17
LINC00396-201ENST00000411690 TGS1Q96RS0 853 aaKnown RBP7.74□□□□□ -1.17
LINC00396-201ENST00000411690 POP1Q99575 1024 aaKnown RBP7.74□□□□□ -1.17
LINC00396-201ENST00000411690 FTOQ9C0B1 505 aaKnown RBP eCLIP7.74□□□□□ -1.17
LINC00396-201ENST00000411690 EHD4Q9H223 541 aa7.74□□□□□ -1.17
LINC00396-201ENST00000411690 ABHD16BQ9H3Z7 469 aa7.74□□□□□ -1.17
LINC00396-201ENST00000411690 PA2G4Q9UQ80 394 aaKnown RBP7.74□□□□□ -1.17
LINC00396-201ENST00000411690 WDFY4Q6ZS81 3184 aa7.74□□□□□ -1.17
LINC00396-201ENST00000411690 TRANK1O15050 2925 aa7.73□□□□□ -1.17
LINC00396-201ENST00000411690 TMEM221A6NGB7 291 aa7.73□□□□□ -1.17
LINC00396-201ENST00000411690 PROB1E7EW31 1015 aa7.73□□□□□ -1.17
LINC00396-201ENST00000411690 M0R296 226 aa7.73□□□□□ -1.17
LINC00396-201ENST00000411690 ZEB2O60315 1214 aa7.73□□□□□ -1.17
LINC00396-201ENST00000411690 BAIAP3O94812 1187 aa7.73□□□□□ -1.17
LINC00396-201ENST00000411690 CYP2C9P11712 490 aa7.73□□□□□ -1.17
LINC00396-201ENST00000411690 TIMP2P16035 220 aa7.73□□□□□ -1.17
LINC00396-201ENST00000411690 RFC2P35250 354 aa7.73□□□□□ -1.17
LINC00396-201ENST00000411690 USP5P45974 858 aa7.73□□□□□ -1.17
LINC00396-201ENST00000411690 KCNJ6P48051 423 aa7.73□□□□□ -1.17
LINC00396-201ENST00000411690 ERVK-21P61565 698 aa7.73□□□□□ -1.17
LINC00396-201ENST00000411690 USP46P62068 366 aa7.73□□□□□ -1.17
LINC00396-201ENST00000411690 PSMC6P62333 389 aa7.73□□□□□ -1.17
LINC00396-201ENST00000411690 ASCL5Q7RTU5 278 aa7.73□□□□□ -1.17
LINC00396-201ENST00000411690 ADGRA1Q86SQ6 560 aa7.73□□□□□ -1.17
LINC00396-201ENST00000411690 RNF135Q8IUD6 432 aa7.73□□□□□ -1.17
LINC00396-201ENST00000411690 SPICE1Q8N0Z3 855 aa7.73□□□□□ -1.17
LINC00396-201ENST00000411690 FBXL6Q8N531 539 aa7.73□□□□□ -1.17
LINC00396-201ENST00000411690 ALDH8A1Q9H2A2 487 aaPredicted RBP7.73□□□□□ -1.17
LINC00396-201ENST00000411690 CTNNA3Q9UI47 895 aa7.73□□□□□ -1.17
LINC00396-201ENST00000411690 ADAMTS5Q9UNA0 930 aa7.73□□□□□ -1.17
LINC00396-201ENST00000411690 H0Y858 1186 aa7.72□□□□□ -1.17
LINC00396-201ENST00000411690 VWA5AO00534 786 aa7.72□□□□□ -1.17
LINC00396-201ENST00000411690 WDR46O15213 610 aaKnown RBP7.72□□□□□ -1.17
LINC00396-201ENST00000411690 IQCF3P0C7M6 154 aa7.72□□□□□ -1.17
LINC00396-201ENST00000411690 ARID4AP29374 1257 aaPredicted RBP7.72□□□□□ -1.17
LINC00396-201ENST00000411690 SHMT1P34896 483 aa7.72□□□□□ -1.17
LINC00396-201ENST00000411690 MCAMP43121 646 aa7.72□□□□□ -1.17
LINC00396-201ENST00000411690 DYNLL1P63167 89 aaKnown RBP7.72□□□□□ -1.17
LINC00396-201ENST00000411690 TNFAIP2Q03169 654 aa7.72□□□□□ -1.17
LINC00396-201ENST00000411690 TFCP2Q12800 502 aa7.72□□□□□ -1.17
LINC00396-201ENST00000411690 FSCN1Q16658 493 aaKnown RBP7.72□□□□□ -1.17
LINC00396-201ENST00000411690 RETREG2Q8NC44 543 aa7.72□□□□□ -1.17
LINC00396-201ENST00000411690 PABPC5Q96DU9 382 aaKnown RBP7.72□□□□□ -1.17
LINC00396-201ENST00000411690 CRBNQ96SW2 442 aa7.72□□□□□ -1.17
LINC00396-201ENST00000411690 COPRSQ9NQ92 184 aa7.72□□□□□ -1.17
LINC00396-201ENST00000411690 TLR9Q9NR96 1032 aa7.72□□□□□ -1.17
LINC00396-201ENST00000411690 TRMT13Q9NUP7 481 aaKnown RBP7.72□□□□□ -1.17
LINC00396-201ENST00000411690 FOCADQ5VW36 1801 aa7.71□□□□□ -1.17
LINC00396-201ENST00000411690 USP34Q70CQ2 3546 aa7.71□□□□□ -1.17
LINC00396-201ENST00000411690 DNAJC25-GNG10A0A024R161 153 aa7.71□□□□□ -1.18
LINC00396-201ENST00000411690 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.71□□□□□ -1.18
LINC00396-201ENST00000411690 PRR23AA6NEV1 266 aa7.71□□□□□ -1.18
LINC00396-201ENST00000411690 AVPR2P30518 371 aa7.71□□□□□ -1.18
LINC00396-201ENST00000411690 PLCD1P51178 756 aa7.71□□□□□ -1.18
LINC00396-201ENST00000411690 PTPROQ16827 1216 aa7.71□□□□□ -1.18
LINC00396-201ENST00000411690 ARMCX2Q7L311 632 aa7.71□□□□□ -1.18
LINC00396-201ENST00000411690 TMCO2Q7Z6W1 182 aaPredicted RBP7.71□□□□□ -1.18
LINC00396-201ENST00000411690 TLK2Q86UE8 772 aa7.71□□□□□ -1.18
LINC00396-201ENST00000411690 RETREG3Q86VR2 466 aa7.71□□□□□ -1.18
LINC00396-201ENST00000411690 TMEM151AQ8N4L1 468 aa7.71□□□□□ -1.18
LINC00396-201ENST00000411690 MAGEB6Q8N7X4 407 aa7.71□□□□□ -1.18
LINC00396-201ENST00000411690 MRPL38Q96DV4 380 aaKnown RBP7.71□□□□□ -1.18
LINC00396-201ENST00000411690 RAD9AQ99638 391 aa7.71□□□□□ -1.18
LINC00396-201ENST00000411690 FSD1Q9BTV5 496 aa7.71□□□□□ -1.18
LINC00396-201ENST00000411690 AP5M1Q9H0R1 490 aa7.71□□□□□ -1.18
LINC00396-201ENST00000411690 SH2D4AQ9H788 454 aa7.71□□□□□ -1.18
LINC00396-201ENST00000411690 VCPKMTQ9H867 229 aa7.71□□□□□ -1.18
LINC00396-201ENST00000411690 ARHGEF10LQ9HCE6 1279 aa7.71□□□□□ -1.18
LINC00396-201ENST00000411690 ALG13Q9NP73 1137 aaKnown RBP7.71□□□□□ -1.18
LINC00396-201ENST00000411690 FBXO28Q9NVF7 368 aa7.71□□□□□ -1.18
LINC00396-201ENST00000411690 ZNF214Q9UL59 606 aaPredicted RBP7.71□□□□□ -1.18
LINC00396-201ENST00000411690 TMX2Q9Y320 296 aa7.71□□□□□ -1.18
LINC00396-201ENST00000411690 ASTN1O14525 1302 aa7.71□□□□□ -1.18
LINC00396-201ENST00000411690 TNKSO95271 1327 aa7.71□□□□□ -1.18
LINC00396-201ENST00000411690 BRWD1Q9NSI6 2320 aa7.7□□□□□ -1.18
LINC00396-201ENST00000411690 SCN5AQ14524 2016 aa7.7□□□□□ -1.18
LINC00396-201ENST00000411690 MED19A0JLT2 244 aaPredicted RBP7.7□□□□□ -1.18
LINC00396-201ENST00000411690 LINC01553A4QN01 128 aa7.7□□□□□ -1.18
LINC00396-201ENST00000411690 DYNC1LI2O43237 492 aaPredicted RBP7.7□□□□□ -1.18
LINC00396-201ENST00000411690 POLR3DP05423 398 aaPredicted RBP7.7□□□□□ -1.18
LINC00396-201ENST00000411690 UQCRFS1P1P0C7P4 283 aa7.7□□□□□ -1.18
LINC00396-201ENST00000411690 CCNYL3P0C7X3 344 aa7.7□□□□□ -1.18
LINC00396-201ENST00000411690 UBTFL1P0CB47 393 aaPredicted RBP7.7□□□□□ -1.18
LINC00396-201ENST00000411690 CYP7A1P22680 504 aa7.7□□□□□ -1.18
LINC00396-201ENST00000411690 VCPP55072 806 aaKnown RBP7.7□□□□□ -1.18
LINC00396-201ENST00000411690 WDR4P57081 412 aaKnown RBP7.7□□□□□ -1.18
LINC00396-201ENST00000411690 WDR5P61964 334 aaKnown RBP7.7□□□□□ -1.18
LINC00396-201ENST00000411690 ZXDAP98168 799 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms