RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 SRGAP3O43295 1099 aa-0.25□□□□□ -2.45
RNU4-88P-201ENST00000411220 USP17L8P0C7I0 530 aa-0.25□□□□□ -2.45
RNU4-88P-201ENST00000411220 USP14P54578 494 aa-0.25□□□□□ -2.45
RNU4-88P-201ENST00000411220 EIF2B5Q13144 721 aaKnown RBP-0.25□□□□□ -2.45
RNU4-88P-201ENST00000411220 AP3B2Q13367 1082 aa-0.25□□□□□ -2.45
RNU4-88P-201ENST00000411220 LAMB3Q13751 1172 aa-0.25□□□□□ -2.45
RNU4-88P-201ENST00000411220 SLC9A4Q6AI14 798 aa-0.25□□□□□ -2.45
RNU4-88P-201ENST00000411220 Q6YL49 198 aa-0.25□□□□□ -2.45
RNU4-88P-201ENST00000411220 CDC37L1Q7L3B6 337 aa-0.25□□□□□ -2.45
RNU4-88P-201ENST00000411220 CXorf67Q86X51 503 aaPredicted RBP-0.25□□□□□ -2.45
RNU4-88P-201ENST00000411220 DDX17Q92841 729 aaKnown RBP-0.25□□□□□ -2.45
RNU4-88P-201ENST00000411220 ANKRD9Q96BM1 317 aaPredicted RBP-0.25□□□□□ -2.45
RNU4-88P-201ENST00000411220 OSMRQ99650 979 aa-0.25□□□□□ -2.45
RNU4-88P-201ENST00000411220 C1QTNF5Q9BXJ0 243 aa-0.25□□□□□ -2.45
RNU4-88P-201ENST00000411220 BHLHE41Q9C0J9 482 aaPredicted RBP-0.25□□□□□ -2.45
RNU4-88P-201ENST00000411220 BARX1Q9HBU1 254 aaPredicted RBP-0.25□□□□□ -2.45
RNU4-88P-201ENST00000411220 TTC28Q96AY4 2481 aa-0.25□□□□□ -2.45
RNU4-88P-201ENST00000411220 DRGXA6NNA5 263 aa-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 RECQL4O94761 1208 aa-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 NTF4P34130 210 aa-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 VEGFCP49767 419 aa-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 HOXA4Q00056 320 aaPredicted RBP-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 CRHR2Q13324 411 aa-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 RRP1BQ14684 758 aaKnown RBP-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 KRTAP21-1Q3LI58 79 aa-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 LETMD1Q6P1Q0 360 aa-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 KCNV1Q6PIU1 500 aa-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 THEMISQ8N1K5 641 aaPredicted RBP-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 KCT2Q8NC54 265 aa-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 RIN3Q8TB24 985 aa-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 KCNV2Q8TDN2 545 aa-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 THAP3Q8WTV1 239 aaPredicted RBP-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 SLC25A43Q8WUT9 341 aaPredicted RBP-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 DDB2Q92466 427 aa-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 HMCESQ96FZ2 354 aa-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 TMEM79Q9BSE2 394 aa-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 EGLN1Q9GZT9 426 aa-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 SLC7A10Q9NS82 523 aa-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 DBR1Q9UK59 544 aaKnown RBP-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 TLK1Q9UKI8 766 aa-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 TTF2Q9UNY4 1162 aaKnown RBP-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 NOD1Q9Y239 953 aa-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 SLC4A7Q9Y6M7 1214 aa-0.26□□□□□ -2.45
RNU4-88P-201ENST00000411220 ATAD2Q6PL18 1390 aa-0.27□□□□□ -2.45
RNU4-88P-201ENST00000411220 LRRC3CA6NJW4 275 aa-0.27□□□□□ -2.45
RNU4-88P-201ENST00000411220 PHGR1C9JFL3 82 aa-0.27□□□□□ -2.45
RNU4-88P-201ENST00000411220 F8W031 263 aaPredicted RBP-0.27□□□□□ -2.45
RNU4-88P-201ENST00000411220 CAMTA2O94983 1202 aa-0.27□□□□□ -2.45
RNU4-88P-201ENST00000411220 RHCEP18577 417 aa-0.27□□□□□ -2.45
RNU4-88P-201ENST00000411220 NANOS2P60321 138 aaKnown RBP-0.27□□□□□ -2.45
RNU4-88P-201ENST00000411220 KRTAP10-4P60372 401 aaPredicted RBP-0.27□□□□□ -2.45
RNU4-88P-201ENST00000411220 GTF2IP78347 998 aa-0.27□□□□□ -2.45
RNU4-88P-201ENST00000411220 NFATC3Q12968 1075 aa-0.27□□□□□ -2.45
RNU4-88P-201ENST00000411220 C11orf91Q3C1V1 193 aa-0.27□□□□□ -2.45
RNU4-88P-201ENST00000411220 ZDHHC20Q5W0Z9 365 aa-0.27□□□□□ -2.45
RNU4-88P-201ENST00000411220 CHMP7Q8WUX9 453 aaPredicted RBP-0.27□□□□□ -2.45
RNU4-88P-201ENST00000411220 NSMCE1Q8WV22 266 aa-0.27□□□□□ -2.45
RNU4-88P-201ENST00000411220 NEIL1Q96FI4 390 aaPredicted RBP-0.27□□□□□ -2.45
RNU4-88P-201ENST00000411220 OR14A2Q96R54 314 aa-0.27□□□□□ -2.45
RNU4-88P-201ENST00000411220 ZKSCAN3Q9BRR0 538 aa-0.27□□□□□ -2.45
RNU4-88P-201ENST00000411220 ZC3H12CQ9C0D7 883 aaKnown RBP-0.27□□□□□ -2.45
RNU4-88P-201ENST00000411220 KRT82Q9NSB4 513 aa-0.27□□□□□ -2.45
RNU4-88P-201ENST00000411220 ZIM2Q9NZV7 527 aa-0.27□□□□□ -2.45
RNU4-88P-201ENST00000411220 TNFRSF10DQ9UBN6 386 aa-0.27□□□□□ -2.45
RNU4-88P-201ENST00000411220 FADS2P1A8MWK0 482 aa-0.28□□□□□ -2.45
RNU4-88P-201ENST00000411220 TRAF5O00463 557 aa-0.28□□□□□ -2.45
RNU4-88P-201ENST00000411220 CYP27B1O15528 508 aa-0.28□□□□□ -2.45
RNU4-88P-201ENST00000411220 ITGB1P05556 798 aa-0.28□□□□□ -2.45
RNU4-88P-201ENST00000411220 TCEA1P23193 301 aaKnown RBP-0.28□□□□□ -2.45
RNU4-88P-201ENST00000411220 LTBRP36941 435 aa-0.28□□□□□ -2.45
RNU4-88P-201ENST00000411220 HHEXQ03014 270 aa-0.28□□□□□ -2.45
RNU4-88P-201ENST00000411220 KCNC3Q14003 757 aa-0.28□□□□□ -2.45
RNU4-88P-201ENST00000411220 RALYLQ86SE5 291 aaKnown RBP-0.28□□□□□ -2.45
RNU4-88P-201ENST00000411220 GAS2L2Q8NHY3 880 aa-0.28□□□□□ -2.45
RNU4-88P-201ENST00000411220 DCTN5Q9BTE1 182 aa-0.28□□□□□ -2.45
RNU4-88P-201ENST00000411220 HIPK2Q9H2X6 1198 aa-0.28□□□□□ -2.45
RNU4-88P-201ENST00000411220 TESPA1A2RU30 521 aaPredicted RBP-0.29□□□□□ -2.46
RNU4-88P-201ENST00000411220 CLASP2O75122 1294 aaKnown RBP-0.29□□□□□ -2.46
RNU4-88P-201ENST00000411220 PPFIA4O75335 1185 aa-0.29□□□□□ -2.46
RNU4-88P-201ENST00000411220 IL13P35225 146 aa-0.29□□□□□ -2.46
RNU4-88P-201ENST00000411220 CSRP3P50461 194 aa-0.29□□□□□ -2.46
RNU4-88P-201ENST00000411220 SLC1A5Q15758 541 aa-0.29□□□□□ -2.46
RNU4-88P-201ENST00000411220 PPM1JQ5JR12 505 aa-0.29□□□□□ -2.46
RNU4-88P-201ENST00000411220 UBAP2Q5T6F2 1119 aaKnown RBP-0.29□□□□□ -2.46
RNU4-88P-201ENST00000411220 ZNF626Q68DY1 528 aa-0.29□□□□□ -2.46
RNU4-88P-201ENST00000411220 SGMS1Q86VZ5 419 aa-0.29□□□□□ -2.46
RNU4-88P-201ENST00000411220 MFSD2AQ8NA29 543 aa-0.29□□□□□ -2.46
RNU4-88P-201ENST00000411220 PLPP7Q8NBV4 271 aa-0.29□□□□□ -2.46
RNU4-88P-201ENST00000411220 KREMEN2Q8NCW0 462 aa-0.29□□□□□ -2.46
RNU4-88P-201ENST00000411220 CAGE1Q8TC20 777 aa-0.29□□□□□ -2.46
RNU4-88P-201ENST00000411220 C16orf92Q96LL3 132 aa-0.29□□□□□ -2.46
RNU4-88P-201ENST00000411220 SEMA4GQ9NTN9 838 aa-0.29□□□□□ -2.46
RNU4-88P-201ENST00000411220 SEMA5BQ9P283 1151 aa-0.29□□□□□ -2.46
RNU4-88P-201ENST00000411220 FZD1Q9UP38 647 aa-0.29□□□□□ -2.46
RNU4-88P-201ENST00000411220 WIPF3A6NGB9 483 aa-0.3□□□□□ -2.46
RNU4-88P-201ENST00000411220 TRAFD1O14545 582 aaPredicted RBP-0.3□□□□□ -2.46
RNU4-88P-201ENST00000411220 PROP1O75360 226 aa-0.3□□□□□ -2.46
RNU4-88P-201ENST00000411220 C1QL1O75973 258 aa-0.3□□□□□ -2.46
RNU4-88P-201ENST00000411220 SEC24DO94855 1032 aaPredicted RBP-0.3□□□□□ -2.46
RNU4-88P-201ENST00000411220 B3GALT4O96024 378 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms