RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 MMP1P03956 469 aa16.46■□□□□ 0.23
LIMS2-209ENST00000410038 XRCC5P13010 732 aaKnown RBP16.46■□□□□ 0.23
LIMS2-209ENST00000410038 SOX10P56693 466 aa16.46■□□□□ 0.23
LIMS2-209ENST00000410038 IRF5Q13568 498 aa16.46■□□□□ 0.23
LIMS2-209ENST00000410038 BLIDQ8IZY5 108 aa16.46■□□□□ 0.23
LIMS2-209ENST00000410038 REXO1Q8N1G1 1221 aaKnown RBP16.46■□□□□ 0.23
LIMS2-209ENST00000410038 BICD2Q8TD16 824 aa16.46■□□□□ 0.23
LIMS2-209ENST00000410038 MAML3Q96JK9 1138 aa16.46■□□□□ 0.23
LIMS2-209ENST00000410038 TMEM260Q9NX78 707 aa16.46■□□□□ 0.23
LIMS2-209ENST00000410038 LRRC37A2A6NM11 1700 aa16.45■□□□□ 0.22
LIMS2-209ENST00000410038 M0R2N6 131 aa16.45■□□□□ 0.22
LIMS2-209ENST00000410038 CCL14Q16627 93 aa16.45■□□□□ 0.22
LIMS2-209ENST00000410038 JAKMIP3Q5VZ66 844 aa16.45■□□□□ 0.22
LIMS2-209ENST00000410038 LARP1BQ659C4 914 aaKnown RBP16.45■□□□□ 0.22
LIMS2-209ENST00000410038 DNERQ8NFT8 737 aa16.45■□□□□ 0.22
LIMS2-209ENST00000410038 RASGRP4Q8TDF6 673 aa16.45■□□□□ 0.22
LIMS2-209ENST00000410038 RMDN3Q96TC7 470 aa16.45■□□□□ 0.22
LIMS2-209ENST00000410038 ADD3Q9UEY8 706 aaKnown RBP16.45■□□□□ 0.22
LIMS2-209ENST00000410038 ALDH5A1P51649 535 aaPredicted RBP16.44■□□□□ 0.22
LIMS2-209ENST00000410038 ZNF467Q7Z7K2 595 aaPredicted RBP16.44■□□□□ 0.22
LIMS2-209ENST00000410038 RAET1EQ8TD07 263 aa16.44■□□□□ 0.22
LIMS2-209ENST00000410038 OXER1Q8TDS5 423 aa16.44■□□□□ 0.22
LIMS2-209ENST00000410038 PXMP2Q9NR77 195 aa16.44■□□□□ 0.22
LIMS2-209ENST00000410038 FLRT1Q9NZU1 646 aa16.44■□□□□ 0.22
LIMS2-209ENST00000410038 PCDHA6Q9UN73 950 aa16.44■□□□□ 0.22
LIMS2-209ENST00000410038 PTPN22Q9Y2R2 807 aa16.44■□□□□ 0.22
LIMS2-209ENST00000410038 PCDHA8Q9Y5H6 950 aa16.44■□□□□ 0.22
LIMS2-209ENST00000410038 SPDYE3A6NKU9 549 aa16.43■□□□□ 0.22
LIMS2-209ENST00000410038 FOSP01100 380 aaPredicted RBP16.43■□□□□ 0.22
LIMS2-209ENST00000410038 AP3B2Q13367 1082 aa16.43■□□□□ 0.22
LIMS2-209ENST00000410038 DIS3L2Q8IYB7 885 aaKnown RBP16.43■□□□□ 0.22
LIMS2-209ENST00000410038 NSUN6Q8TEA1 469 aaKnown RBP16.43■□□□□ 0.22
LIMS2-209ENST00000410038 PGBD1Q96JS3 809 aa16.43■□□□□ 0.22
LIMS2-209ENST00000410038 PTCH2Q9Y6C5 1203 aa16.43■□□□□ 0.22
LIMS2-209ENST00000410038 DDX49Q9Y6V7 483 aaKnown RBP16.43■□□□□ 0.22
LIMS2-209ENST00000410038 KIAA1217Q5T5P2 1943 aa16.43■□□□□ 0.22
LIMS2-209ENST00000410038 RPTORQ8N122 1335 aa16.43■□□□□ 0.22
LIMS2-209ENST00000410038 BTBD18B2RXH4 712 aa16.43■□□□□ 0.22
LIMS2-209ENST00000410038 ADCY3O60266 1144 aa16.43■□□□□ 0.22
LIMS2-209ENST00000410038 IGHA2P01877 340 aa16.43■□□□□ 0.22
LIMS2-209ENST00000410038 EIF2AK2P19525 551 aaKnown RBP16.43■□□□□ 0.22
LIMS2-209ENST00000410038 PDCP20941 246 aa16.43■□□□□ 0.22
LIMS2-209ENST00000410038 KRT2P35908 639 aa16.43■□□□□ 0.22
LIMS2-209ENST00000410038 NR5A1Q13285 461 aa16.43■□□□□ 0.22
LIMS2-209ENST00000410038 ARHGEF16Q5VV41 709 aa16.43■□□□□ 0.22
LIMS2-209ENST00000410038 MCTP2Q6DN12 878 aa16.43■□□□□ 0.22
LIMS2-209ENST00000410038 MAMDC4Q6UXC1 1216 aa16.43■□□□□ 0.22
LIMS2-209ENST00000410038 TRIB2Q92519 343 aa16.43■□□□□ 0.22
LIMS2-209ENST00000410038 PDCD2LQ9BRP1 358 aa16.43■□□□□ 0.22
LIMS2-209ENST00000410038 ANO3Q9BYT9 981 aa16.43■□□□□ 0.22
LIMS2-209ENST00000410038 BRMS1Q9HCU9 246 aa16.43■□□□□ 0.22
LIMS2-209ENST00000410038 FRMPD4Q14CM0 1322 aa16.42■□□□□ 0.22
LIMS2-209ENST00000410038 H3BQV1 296 aa16.42■□□□□ 0.22
LIMS2-209ENST00000410038 ELNP15502 786 aa16.42■□□□□ 0.22
LIMS2-209ENST00000410038 SYT1P21579 422 aa16.42■□□□□ 0.22
LIMS2-209ENST00000410038 UBXN2AP68543 259 aa16.42■□□□□ 0.22
LIMS2-209ENST00000410038 SAFBQ15424 915 aaKnown RBP eCLIP16.42■□□□□ 0.22
LIMS2-209ENST00000410038 OLFML2BQ68BL8 750 aa16.42■□□□□ 0.22
LIMS2-209ENST00000410038 TNFRSF25Q93038 417 aa16.42■□□□□ 0.22
LIMS2-209ENST00000410038 TINF2Q9BSI4 451 aa16.42■□□□□ 0.22
LIMS2-209ENST00000410038 LOC102724159A0A0B4J2E5 919 aa16.41■□□□□ 0.22
LIMS2-209ENST00000410038 ASB14A6NK59 587 aa16.41■□□□□ 0.22
LIMS2-209ENST00000410038 EDNRBP24530 442 aa16.41■□□□□ 0.22
LIMS2-209ENST00000410038 PGM5Q15124 567 aa16.41■□□□□ 0.22
LIMS2-209ENST00000410038 PWP2Q15269 919 aaKnown RBP16.41■□□□□ 0.22
LIMS2-209ENST00000410038 TRMT44Q8IYL2 757 aaKnown RBP16.41■□□□□ 0.22
LIMS2-209ENST00000410038 MSL3Q8N5Y2 521 aaKnown RBP16.41■□□□□ 0.22
LIMS2-209ENST00000410038 IL31RAQ8NI17 732 aa16.41■□□□□ 0.22
LIMS2-209ENST00000410038 MORC4Q8TE76 937 aa16.41■□□□□ 0.22
LIMS2-209ENST00000410038 PXYLP1Q8TE99 480 aa16.41■□□□□ 0.22
LIMS2-209ENST00000410038 IWS1Q96ST2 819 aa16.41■□□□□ 0.22
LIMS2-209ENST00000410038 NR3C2P08235 984 aa16.4■□□□□ 0.22
LIMS2-209ENST00000410038 CYP2C19P33261 490 aa16.4■□□□□ 0.22
LIMS2-209ENST00000410038 EARS2Q5JPH6 523 aaKnown RBP16.4■□□□□ 0.22
LIMS2-209ENST00000410038 ARMCX2Q7L311 632 aa16.4■□□□□ 0.22
LIMS2-209ENST00000410038 FOXP1Q9H334 677 aaPredicted RBP16.4■□□□□ 0.22
LIMS2-209ENST00000410038 BRCA2P51587 3418 aa16.4■□□□□ 0.22
LIMS2-209ENST00000410038 SYNGAP1Q96PV0 1343 aa16.4■□□□□ 0.22
LIMS2-209ENST00000410038 VPS37CA5D8V6 355 aaPredicted RBP16.4■□□□□ 0.22
LIMS2-209ENST00000410038 KIF28PB7ZC32 967 aa16.4■□□□□ 0.22
LIMS2-209ENST00000410038 SNAI1O95863 264 aaPredicted RBP16.4■□□□□ 0.22
LIMS2-209ENST00000410038 GRK4P32298 578 aa16.4■□□□□ 0.22
LIMS2-209ENST00000410038 SREBF1P36956 1147 aa16.4■□□□□ 0.22
LIMS2-209ENST00000410038 PRPF38BQ5VTL8 546 aaKnown RBP16.4■□□□□ 0.22
LIMS2-209ENST00000410038 KRT25Q7Z3Z0 450 aa16.4■□□□□ 0.22
LIMS2-209ENST00000410038 VSIG10LQ86VR7 867 aa16.4■□□□□ 0.22
LIMS2-209ENST00000410038 SLAIN1Q8ND83 568 aa16.4■□□□□ 0.22
LIMS2-209ENST00000410038 CRYGNQ8WXF5 182 aa16.4■□□□□ 0.22
LIMS2-209ENST00000410038 MPHOSPH6Q99547 160 aaKnown RBP16.4■□□□□ 0.22
LIMS2-209ENST00000410038 EHMT1Q9H9B1 1298 aa16.4■□□□□ 0.22
LIMS2-209ENST00000410038 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.4■□□□□ 0.22
LIMS2-209ENST00000410038 CCDC194A0A1B0GVG4 234 aa16.39■□□□□ 0.21
LIMS2-209ENST00000410038 FAM205CA6NFA0 338 aa16.39■□□□□ 0.21
LIMS2-209ENST00000410038 B4DLN1 442 aa16.39■□□□□ 0.21
LIMS2-209ENST00000410038 STX6O43752 255 aa16.39■□□□□ 0.21
LIMS2-209ENST00000410038 MYCLP12524 364 aaPredicted RBP16.39■□□□□ 0.21
LIMS2-209ENST00000410038 U2AF2P26368 475 aaKnown RBP eCLIP16.39■□□□□ 0.21
LIMS2-209ENST00000410038 PDE4DQ08499 809 aa16.39■□□□□ 0.21
LIMS2-209ENST00000410038 NONOQ15233 471 aaKnown RBP eCLIP16.39■□□□□ 0.21
LIMS2-209ENST00000410038 PCNX4Q63HM2 1172 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms