RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 ANKIB1Q9P2G1 1089 aa18.57■□□□□ 0.56
LIMS2-208ENST00000410011 SRGAP2O75044 1071 aa18.57■□□□□ 0.56
LIMS2-208ENST00000410011 GRB10Q13322 594 aa18.57■□□□□ 0.56
LIMS2-208ENST00000410011 SNX12Q9UMY4 172 aa18.57■□□□□ 0.56
LIMS2-208ENST00000410011 ZNF263O14978 683 aa18.56■□□□□ 0.56
LIMS2-208ENST00000410011 TACC1O75410 805 aa18.56■□□□□ 0.56
LIMS2-208ENST00000410011 SYF2O95926 243 aaKnown RBP18.56■□□□□ 0.56
LIMS2-208ENST00000410011 IDEP14735 1019 aa18.56■□□□□ 0.56
LIMS2-208ENST00000410011 CAPN2P17655 700 aa18.56■□□□□ 0.56
LIMS2-208ENST00000410011 MAPKAPK5Q8IW41 473 aa18.56■□□□□ 0.56
LIMS2-208ENST00000410011 PCMTD1Q96MG8 357 aaPredicted RBP18.56■□□□□ 0.56
LIMS2-208ENST00000410011 RAB34Q9BZG1 259 aa18.56■□□□□ 0.56
LIMS2-208ENST00000410011 RIC8AQ9NPQ8 531 aa18.56■□□□□ 0.56
LIMS2-208ENST00000410011 HPCAL4Q9UM19 191 aa18.56■□□□□ 0.56
LIMS2-208ENST00000410011 TFR2Q9UP52 801 aa18.56■□□□□ 0.56
LIMS2-208ENST00000410011 SBF2Q86WG5 1849 aa18.56■□□□□ 0.56
LIMS2-208ENST00000410011 ZC3H4Q9UPT8 1303 aaKnown RBP18.56■□□□□ 0.56
LIMS2-208ENST00000410011 EHHADHQ08426 723 aa18.56■□□□□ 0.56
LIMS2-208ENST00000410011 GRIK5Q16478 980 aa18.56■□□□□ 0.56
LIMS2-208ENST00000410011 CCDC70Q6NSX1 233 aa18.56■□□□□ 0.56
LIMS2-208ENST00000410011 SH2D4AQ9H788 454 aa18.56■□□□□ 0.56
LIMS2-208ENST00000410011 DDX60LQ5H9U9 1706 aaKnown RBP18.56■□□□□ 0.56
LIMS2-208ENST00000410011 PJA2O43164 708 aa18.55■□□□□ 0.56
LIMS2-208ENST00000410011 PRPF6O94906 941 aaKnown RBP18.55■□□□□ 0.56
LIMS2-208ENST00000410011 USP17L2Q6R6M4 530 aa18.55■□□□□ 0.56
LIMS2-208ENST00000410011 CREG2Q8IUH2 290 aa18.55■□□□□ 0.56
LIMS2-208ENST00000410011 LARP4BQ92615 738 aaKnown RBP18.55■□□□□ 0.56
LIMS2-208ENST00000410011 PNMA5Q96PV4 448 aa18.55■□□□□ 0.56
LIMS2-208ENST00000410011 ARHGAP20Q9P2F6 1191 aa18.55■□□□□ 0.56
LIMS2-208ENST00000410011 LRWD1Q9UFC0 647 aa18.55■□□□□ 0.56
LIMS2-208ENST00000410011 PCDHA13Q9Y5I0 950 aa18.55■□□□□ 0.56
LIMS2-208ENST00000410011 DUSP10Q9Y6W6 482 aa18.55■□□□□ 0.56
LIMS2-208ENST00000410011 PLIN4Q96Q06 1357 aa18.55■□□□□ 0.56
LIMS2-208ENST00000410011 MYMKA6NI61 221 aa18.55■□□□□ 0.56
LIMS2-208ENST00000410011 PDE2AO00408 941 aaPredicted RBP18.55■□□□□ 0.56
LIMS2-208ENST00000410011 BTDP43251 543 aa18.55■□□□□ 0.56
LIMS2-208ENST00000410011 SEPT2Q15019 361 aa18.55■□□□□ 0.56
LIMS2-208ENST00000410011 CALCRLQ16602 461 aa18.55■□□□□ 0.56
LIMS2-208ENST00000410011 TMEM266Q2M3C6 531 aa18.55■□□□□ 0.56
LIMS2-208ENST00000410011 POTEDQ86YR6 584 aa18.55■□□□□ 0.56
LIMS2-208ENST00000410011 PROM2Q8N271 834 aa18.55■□□□□ 0.56
LIMS2-208ENST00000410011 RTCBQ9Y3I0 505 aaKnown RBP18.55■□□□□ 0.56
LIMS2-208ENST00000410011 IL1R1P14778 569 aa18.54■□□□□ 0.56
LIMS2-208ENST00000410011 TCP1P17987 556 aaKnown RBP18.54■□□□□ 0.56
LIMS2-208ENST00000410011 CYP27A1Q02318 531 aa18.54■□□□□ 0.56
LIMS2-208ENST00000410011 PIGSQ96S52 555 aa18.54■□□□□ 0.56
LIMS2-208ENST00000410011 IFIH1Q9BYX4 1025 aaKnown RBP18.54■□□□□ 0.56
LIMS2-208ENST00000410011 SLC39A2Q9NP94 309 aa18.54■□□□□ 0.56
LIMS2-208ENST00000410011 JADE2Q9NQC1 790 aa18.54■□□□□ 0.56
LIMS2-208ENST00000410011 KDM4FA0A1W2PPD8 638 aa18.54■□□□□ 0.56
LIMS2-208ENST00000410011 MAPK8IP2Q13387 824 aaPredicted RBP18.54■□□□□ 0.56
LIMS2-208ENST00000410011 SLF2Q8IX21 1173 aa18.54■□□□□ 0.56
LIMS2-208ENST00000410011 CCDC155Q8N6L0 562 aa18.54■□□□□ 0.56
LIMS2-208ENST00000410011 CAGE1Q8TC20 777 aa18.54■□□□□ 0.56
LIMS2-208ENST00000410011 CEP95Q96GE4 821 aa18.54■□□□□ 0.56
LIMS2-208ENST00000410011 CAPZA3Q96KX2 299 aa18.54■□□□□ 0.56
LIMS2-208ENST00000410011 SAP30BPQ9UHR5 308 aaKnown RBP18.54■□□□□ 0.56
LIMS2-208ENST00000410011 SSU72P8A0A1W2PR75 194 aa18.53■□□□□ 0.56
LIMS2-208ENST00000410011 TXKP42681 527 aa18.53■□□□□ 0.56
LIMS2-208ENST00000410011 KIF11P52732 1056 aa18.53■□□□□ 0.56
LIMS2-208ENST00000410011 CCDC96Q2M329 555 aa18.53■□□□□ 0.56
LIMS2-208ENST00000410011 PPP4R3AQ6IN85 833 aa18.53■□□□□ 0.56
LIMS2-208ENST00000410011 RAD54LQ92698 747 aa18.53■□□□□ 0.56
LIMS2-208ENST00000410011 BIN2Q9UBW5 565 aaPredicted RBP18.53■□□□□ 0.56
LIMS2-208ENST00000410011 CDK5RAP2Q96SN8 1893 aa18.53■□□□□ 0.56
LIMS2-208ENST00000410011 MACROD2A1Z1Q3 448 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 GNPATO15228 680 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 RNF40O75150 1001 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 SNHG28P0DPA3 235 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 KCNQ4P56696 695 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 RHBDL3P58872 404 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 ASTE1Q2TB18 679 aaPredicted RBP18.52■□□□□ 0.56
LIMS2-208ENST00000410011 TMEM119Q4V9L6 283 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 ASPRV1Q53RT3 343 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 PPP1R18Q6NYC8 613 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 LRRC55Q6ZSA7 311 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 C2CD5Q86YS7 1000 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 TEX11Q8IYF3 940 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 RNF10Q8N5U6 811 aaKnown RBP18.52■□□□□ 0.56
LIMS2-208ENST00000410011 SYN2Q92777 582 aaPredicted RBP18.52■□□□□ 0.56
LIMS2-208ENST00000410011 ARHGEF1Q92888 912 aaKnown RBP18.52■□□□□ 0.56
LIMS2-208ENST00000410011 EEF2KMTQ96G04 330 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 NUCKS1Q9H1E3 243 aaKnown RBP18.52■□□□□ 0.56
LIMS2-208ENST00000410011 CPVLQ9H3G5 476 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 FAM204AQ9H8W3 233 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 CD209Q9NNX6 404 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 FAM184BQ9ULE4 1060 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 GAKO14976 1311 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 EDIL3O43854 480 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 PDHBP11177 359 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 SMIM5Q71RC9 77 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 GOLGA6L1Q8N7Z2 621 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 AENQ8WTP8 325 aaKnown RBP18.52■□□□□ 0.56
LIMS2-208ENST00000410011 BAP1Q92560 729 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 CDK5RAP3Q96JB5 506 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 ALS2CR12Q96Q35 445 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 MTMR7Q9Y216 660 aa18.52■□□□□ 0.56
LIMS2-208ENST00000410011 TNRC6CQ9HCJ0 1690 aaKnown RBP18.52■□□□□ 0.55
LIMS2-208ENST00000410011 RBAK-RBAKDNI3L0D1 243 aa18.51■□□□□ 0.55
LIMS2-208ENST00000410011 NKRFO15226 690 aaKnown RBP eCLIP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms