RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 V9GY48 417 aaPredicted RBP12.56□□□□□ -0.4
CHMP3-205ENST00000409810 hCG_1642624A0A1W2PR95 340 aa12.55□□□□□ -0.4
CHMP3-205ENST00000409810 PIK3CDO00329 1044 aa12.55□□□□□ -0.4
CHMP3-205ENST00000409810 PRPF3O43395 683 aaKnown RBP12.55□□□□□ -0.4
CHMP3-205ENST00000409810 CDKL5O76039 1030 aa12.55□□□□□ -0.4
CHMP3-205ENST00000409810 IFNAR1P17181 557 aa12.55□□□□□ -0.4
CHMP3-205ENST00000409810 HOXA13P31271 388 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-205ENST00000409810 NEK4P51957 841 aa12.55□□□□□ -0.4
CHMP3-205ENST00000409810 AK2P54819 239 aa12.55□□□□□ -0.4
CHMP3-205ENST00000409810 NAPAP54920 295 aa12.55□□□□□ -0.4
CHMP3-205ENST00000409810 CCT2P78371 535 aaKnown RBP12.55□□□□□ -0.4
CHMP3-205ENST00000409810 TNFAIP2Q03169 654 aa12.55□□□□□ -0.4
CHMP3-205ENST00000409810 STXBP2Q15833 593 aa12.55□□□□□ -0.4
CHMP3-205ENST00000409810 WWC2Q6AWC2 1192 aa12.55□□□□□ -0.4
CHMP3-205ENST00000409810 IQSEC1Q6DN90 963 aa12.55□□□□□ -0.4
CHMP3-205ENST00000409810 NOL8Q76FK4 1167 aaKnown RBP12.55□□□□□ -0.4
CHMP3-205ENST00000409810 EEPD1Q7L9B9 569 aa12.55□□□□□ -0.4
CHMP3-205ENST00000409810 GPKOWQ92917 476 aaPredicted RBP eCLIP12.55□□□□□ -0.4
CHMP3-205ENST00000409810 RNF26Q9BY78 433 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-205ENST00000409810 C11orf49Q9H6J7 331 aa12.55□□□□□ -0.4
CHMP3-205ENST00000409810 EHMT1Q9H9B1 1298 aa12.55□□□□□ -0.4
CHMP3-205ENST00000409810 COL20A1Q9P218 1284 aa12.55□□□□□ -0.4
CHMP3-205ENST00000409810 NKRFO15226 690 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHMP3-205ENST00000409810 MYCNP04198 464 aaPredicted RBP12.54□□□□□ -0.4
CHMP3-205ENST00000409810 SCG2P13521 617 aa12.54□□□□□ -0.4
CHMP3-205ENST00000409810 EIF2AK2P19525 551 aaKnown RBP12.54□□□□□ -0.4
CHMP3-205ENST00000409810 ADCYAP1R1P41586 468 aa12.54□□□□□ -0.4
CHMP3-205ENST00000409810 RBM25P49756 843 aaKnown RBP12.54□□□□□ -0.4
CHMP3-205ENST00000409810 SSRP1Q08945 709 aaKnown RBP12.54□□□□□ -0.4
CHMP3-205ENST00000409810 STK3Q13188 491 aa12.54□□□□□ -0.4
CHMP3-205ENST00000409810 TTLL4Q14679 1199 aa12.54□□□□□ -0.4
CHMP3-205ENST00000409810 PFKFB3Q16875 520 aaPredicted RBP12.54□□□□□ -0.4
CHMP3-205ENST00000409810 UBE2Q1Q7Z7E8 422 aa12.54□□□□□ -0.4
CHMP3-205ENST00000409810 FCHSD1Q86WN1 690 aa12.54□□□□□ -0.4
CHMP3-205ENST00000409810 IL27Q8NEV9 243 aa12.54□□□□□ -0.4
CHMP3-205ENST00000409810 CCDC148Q8NFR7 591 aa12.54□□□□□ -0.4
CHMP3-205ENST00000409810 SCFD2Q8WU76 684 aa12.54□□□□□ -0.4
CHMP3-205ENST00000409810 PAWRQ96IZ0 340 aaKnown RBP12.54□□□□□ -0.4
CHMP3-205ENST00000409810 SLC26A6Q9BXS9 759 aa12.54□□□□□ -0.4
CHMP3-205ENST00000409810 BARHL2Q9NY43 387 aa12.54□□□□□ -0.4
CHMP3-205ENST00000409810 SYNRGQ9UMZ2 1314 aa12.54□□□□□ -0.4
CHMP3-205ENST00000409810 MYH7BA7E2Y1 1941 aa12.54□□□□□ -0.4
CHMP3-205ENST00000409810 ALPK3Q96L96 1907 aa12.53□□□□□ -0.4
CHMP3-205ENST00000409810 SPDYE3A6NKU9 549 aa12.53□□□□□ -0.4
CHMP3-205ENST00000409810 ZEB2O60315 1214 aa12.53□□□□□ -0.4
CHMP3-205ENST00000409810 NR3C2P08235 984 aa12.53□□□□□ -0.4
CHMP3-205ENST00000409810 CCND2P30279 289 aa12.53□□□□□ -0.4
CHMP3-205ENST00000409810 ADCY7P51828 1080 aa12.53□□□□□ -0.4
CHMP3-205ENST00000409810 PGM5Q15124 567 aa12.53□□□□□ -0.4
CHMP3-205ENST00000409810 LRRC41Q15345 812 aa12.53□□□□□ -0.4
CHMP3-205ENST00000409810 NTRK3Q16288 839 aa12.53□□□□□ -0.4
CHMP3-205ENST00000409810 GJC2Q5T442 439 aaPredicted RBP12.53□□□□□ -0.4
CHMP3-205ENST00000409810 TAPT1Q6NXT6 567 aa12.53□□□□□ -0.4
CHMP3-205ENST00000409810 TLK2Q86UE8 772 aa12.53□□□□□ -0.4
CHMP3-205ENST00000409810 PCSK9Q8NBP7 692 aaKnown RBP12.53□□□□□ -0.4
CHMP3-205ENST00000409810 DIS3LQ8TF46 1054 aaKnown RBP12.53□□□□□ -0.4
CHMP3-205ENST00000409810 PHKBQ93100 1093 aa12.53□□□□□ -0.4
CHMP3-205ENST00000409810 LENG1Q96BZ8 264 aaPredicted RBP12.53□□□□□ -0.4
CHMP3-205ENST00000409810 PDCD2LQ9BRP1 358 aa12.53□□□□□ -0.4
CHMP3-205ENST00000409810 LARP6Q9BRS8 491 aaKnown RBP12.53□□□□□ -0.4
CHMP3-205ENST00000409810 AP5M1Q9H0R1 490 aa12.53□□□□□ -0.4
CHMP3-205ENST00000409810 NCOA5Q9HCD5 579 aaKnown RBP12.53□□□□□ -0.4
CHMP3-205ENST00000409810 Q9Y3F1 56 aa12.53□□□□□ -0.4
CHMP3-205ENST00000409810 FRMPD4Q14CM0 1322 aa12.53□□□□□ -0.4
CHMP3-205ENST00000409810 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.52□□□□□ -0.41
CHMP3-205ENST00000409810 RBM47A0AV96 593 aaKnown RBP12.52□□□□□ -0.41
CHMP3-205ENST00000409810 STXBP3O00186 592 aa12.52□□□□□ -0.41
CHMP3-205ENST00000409810 MEIS2O14770 477 aa12.52□□□□□ -0.41
CHMP3-205ENST00000409810 PFKFB2O60825 505 aa12.52□□□□□ -0.41
CHMP3-205ENST00000409810 ADAMTS4O75173 837 aa12.52□□□□□ -0.41
CHMP3-205ENST00000409810 EIF3JO75822 258 aaKnown RBP12.52□□□□□ -0.41
CHMP3-205ENST00000409810 STAM2O75886 525 aa12.52□□□□□ -0.41
CHMP3-205ENST00000409810 DEXIO95424 95 aa12.52□□□□□ -0.41
CHMP3-205ENST00000409810 PGK1P00558 417 aa12.52□□□□□ -0.41
CHMP3-205ENST00000409810 C6orf222P0C671 652 aaPredicted RBP12.52□□□□□ -0.41
CHMP3-205ENST00000409810 MYCLP12524 364 aaPredicted RBP12.52□□□□□ -0.41
CHMP3-205ENST00000409810 CST5P28325 142 aaPredicted RBP12.52□□□□□ -0.41
CHMP3-205ENST00000409810 MNX1P50219 401 aaPredicted RBP12.52□□□□□ -0.41
CHMP3-205ENST00000409810 GJA9P57773 515 aa12.52□□□□□ -0.41
CHMP3-205ENST00000409810 SCRN1Q12765 414 aa12.52□□□□□ -0.41
CHMP3-205ENST00000409810 RABEP1Q15276 862 aa12.52□□□□□ -0.41
CHMP3-205ENST00000409810 GNPTABQ3T906 1256 aa12.52□□□□□ -0.41
CHMP3-205ENST00000409810 DUSP28Q4G0W2 176 aa12.52□□□□□ -0.41
CHMP3-205ENST00000409810 KCNV1Q6PIU1 500 aa12.52□□□□□ -0.41
CHMP3-205ENST00000409810 USP17L6PQ6QN14 398 aa12.52□□□□□ -0.41
CHMP3-205ENST00000409810 TSEN34Q9BSV6 310 aaKnown RBP12.52□□□□□ -0.41
CHMP3-205ENST00000409810 WDR11Q9BZH6 1224 aa12.52□□□□□ -0.41
CHMP3-205ENST00000409810 UPF3AQ9H1J1 476 aaKnown RBP12.52□□□□□ -0.41
CHMP3-205ENST00000409810 RIC8AQ9NPQ8 531 aa12.52□□□□□ -0.41
CHMP3-205ENST00000409810 PDGFCQ9NRA1 345 aa12.52□□□□□ -0.41
CHMP3-205ENST00000409810 TPCN1Q9ULQ1 816 aa12.52□□□□□ -0.41
CHMP3-205ENST00000409810 GNEQ9Y223 722 aaKnown RBP12.52□□□□□ -0.41
CHMP3-205ENST00000409810 DDX49Q9Y6V7 483 aaKnown RBP12.52□□□□□ -0.41
CHMP3-205ENST00000409810 TNRC18O15417 2968 aaPredicted RBP12.51□□□□□ -0.41
CHMP3-205ENST00000409810 ESYT2A0FGR8 921 aa12.51□□□□□ -0.41
CHMP3-205ENST00000409810 SMCO2A6NFE2 343 aa12.51□□□□□ -0.41
CHMP3-205ENST00000409810 MOXD2PA6NHM9 499 aa12.51□□□□□ -0.41
CHMP3-205ENST00000409810 ADCY6O43306 1168 aa12.51□□□□□ -0.41
CHMP3-205ENST00000409810 FOSP01100 380 aaPredicted RBP12.51□□□□□ -0.41
CHMP3-205ENST00000409810 COL6A1P12109 1028 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms