RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 TARSL2A2RTX5 802 aaKnown RBP16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 NUTM2BA6NNL0 878 aaPredicted RBP16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 NUTM2EB1AL46 878 aaPredicted RBP16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 RPS6KA4O75676 772 aa16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 CDK17Q00537 523 aa16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 KIF5AQ12840 1032 aa16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 SOGA3Q5TF21 947 aa16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 SMCR8Q8TEV9 937 aaPredicted RBP16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 SECISBP2LQ93073 1101 aaKnown RBP16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 RRP36Q96EU6 259 aaKnown RBP16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 CALML4Q96GE6 196 aa16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 PIGSQ96S52 555 aa16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 RTFDC1Q9BY42 306 aaPredicted RBP16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 TMEM260Q9NX78 707 aa16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 EPHB6O15197 1021 aa16.88■□□□□ 0.29
LYSMD4-204ENST00000409796 MCM3P25205 808 aa16.88■□□□□ 0.29
LYSMD4-204ENST00000409796 TXKP42681 527 aa16.88■□□□□ 0.29
LYSMD4-204ENST00000409796 GRB10Q13322 594 aa16.88■□□□□ 0.29
LYSMD4-204ENST00000409796 COBLL1Q53SF7 1204 aa16.88■□□□□ 0.29
LYSMD4-204ENST00000409796 CENPPQ6IPU0 288 aa16.88■□□□□ 0.29
LYSMD4-204ENST00000409796 CCDC42Q96M95 316 aa16.88■□□□□ 0.29
LYSMD4-204ENST00000409796 JADE2Q9NQC1 790 aa16.88■□□□□ 0.29
LYSMD4-204ENST00000409796 BLOC1S4Q9NUP1 217 aa16.88■□□□□ 0.29
LYSMD4-204ENST00000409796 GNPATO15228 680 aa16.88■□□□□ 0.29
LYSMD4-204ENST00000409796 SYF2O95926 243 aaKnown RBP16.88■□□□□ 0.29
LYSMD4-204ENST00000409796 AARSP49588 968 aaKnown RBP eCLIP16.88■□□□□ 0.29
LYSMD4-204ENST00000409796 C2orf54Q08AI8 447 aa16.88■□□□□ 0.29
LYSMD4-204ENST00000409796 MAP9Q49MG5 647 aa16.88■□□□□ 0.29
LYSMD4-204ENST00000409796 LEKR1Q6ZMV7 388 aa16.88■□□□□ 0.29
LYSMD4-204ENST00000409796 GSPT2Q8IYD1 628 aaKnown RBP16.88■□□□□ 0.29
LYSMD4-204ENST00000409796 NEDD1Q8NHV4 660 aa16.88■□□□□ 0.29
LYSMD4-204ENST00000409796 CWC15Q9P013 229 aaKnown RBP16.88■□□□□ 0.29
LYSMD4-204ENST00000409796 HPCAL4Q9UM19 191 aa16.88■□□□□ 0.29
LYSMD4-204ENST00000409796 MYMKA6NI61 221 aa16.87■□□□□ 0.29
LYSMD4-204ENST00000409796 LDHCP07864 332 aa16.87■□□□□ 0.29
LYSMD4-204ENST00000409796 BTDP43251 543 aa16.87■□□□□ 0.29
LYSMD4-204ENST00000409796 NFIXQ14938 502 aa16.87■□□□□ 0.29
LYSMD4-204ENST00000409796 C16orf86Q6ZW13 317 aa16.87■□□□□ 0.29
LYSMD4-204ENST00000409796 SV2BQ7L1I2 683 aa16.87■□□□□ 0.29
LYSMD4-204ENST00000409796 GDAP1L1Q96MZ0 367 aa16.87■□□□□ 0.29
LYSMD4-204ENST00000409796 PNMA5Q96PV4 448 aa16.87■□□□□ 0.29
LYSMD4-204ENST00000409796 ARHGAP20Q9P2F6 1191 aa16.87■□□□□ 0.29
LYSMD4-204ENST00000409796 SEC63Q9UGP8 760 aaKnown RBP16.87■□□□□ 0.29
LYSMD4-204ENST00000409796 SIK3Q9Y2K2 1263 aa16.87■□□□□ 0.29
LYSMD4-204ENST00000409796 ZC3H4Q9UPT8 1303 aaKnown RBP16.87■□□□□ 0.29
LYSMD4-204ENST00000409796 MYBL2P10244 700 aa16.87■□□□□ 0.29
LYSMD4-204ENST00000409796 SPA17Q15506 151 aa16.87■□□□□ 0.29
LYSMD4-204ENST00000409796 CCDC96Q2M329 555 aa16.87■□□□□ 0.29
LYSMD4-204ENST00000409796 VWA3BQ502W6 1294 aa16.87■□□□□ 0.29
LYSMD4-204ENST00000409796 AMIGO3Q86WK7 504 aa16.87■□□□□ 0.29
LYSMD4-204ENST00000409796 UBA5Q9GZZ9 404 aa16.87■□□□□ 0.29
LYSMD4-204ENST00000409796 FAM204AQ9H8W3 233 aa16.87■□□□□ 0.29
LYSMD4-204ENST00000409796 PLAGL2Q9UPG8 496 aa16.87■□□□□ 0.29
LYSMD4-204ENST00000409796 LEMD3Q9Y2U8 911 aa16.87■□□□□ 0.29
LYSMD4-204ENST00000409796 RNF40O75150 1001 aa16.86■□□□□ 0.29
LYSMD4-204ENST00000409796 HNRNPH3P31942 346 aaKnown RBP16.86■□□□□ 0.29
LYSMD4-204ENST00000409796 PAXIP1Q6ZW49 1069 aaPredicted RBP16.86■□□□□ 0.29
LYSMD4-204ENST00000409796 DYMQ7RTS9 669 aa16.86■□□□□ 0.29
LYSMD4-204ENST00000409796 C2CD5Q86YS7 1000 aa16.86■□□□□ 0.29
LYSMD4-204ENST00000409796 GPIHBP1Q8IV16 184 aa16.86■□□□□ 0.29
LYSMD4-204ENST00000409796 REXO1Q8N1G1 1221 aaKnown RBP16.86■□□□□ 0.29
LYSMD4-204ENST00000409796 TSGA10Q9BZW7 698 aa16.86■□□□□ 0.29
LYSMD4-204ENST00000409796 NDST4Q9H3R1 872 aa16.86■□□□□ 0.29
LYSMD4-204ENST00000409796 MLXIPQ9HAP2 919 aa16.86■□□□□ 0.29
LYSMD4-204ENST00000409796 ZNF287Q9HBT7 754 aa16.86■□□□□ 0.29
LYSMD4-204ENST00000409796 FAM207AQ9NSI2 230 aaPredicted RBP16.86■□□□□ 0.29
LYSMD4-204ENST00000409796 CAPN6Q9Y6Q1 641 aa16.86■□□□□ 0.29
LYSMD4-204ENST00000409796 RC3H1Q5TC82 1133 aaKnown RBP16.86■□□□□ 0.29
LYSMD4-204ENST00000409796 SRLQ86TD4 932 aa16.86■□□□□ 0.29
LYSMD4-204ENST00000409796 COG1Q8WTW3 980 aa16.86■□□□□ 0.29
LYSMD4-204ENST00000409796 CEP95Q96GE4 821 aa16.86■□□□□ 0.29
LYSMD4-204ENST00000409796 MTMR9Q96QG7 549 aa16.86■□□□□ 0.29
LYSMD4-204ENST00000409796 PCDHA13Q9Y5I0 950 aa16.86■□□□□ 0.29
LYSMD4-204ENST00000409796 CCNI2Q6ZMN8 369 aaPredicted RBP16.85■□□□□ 0.29
LYSMD4-204ENST00000409796 UNC13DQ70J99 1090 aa16.85■□□□□ 0.29
LYSMD4-204ENST00000409796 ZNF804AQ7Z570 1209 aa16.85■□□□□ 0.29
LYSMD4-204ENST00000409796 TEX11Q8IYF3 940 aa16.85■□□□□ 0.29
LYSMD4-204ENST00000409796 IFIH1Q9BYX4 1025 aaKnown RBP16.85■□□□□ 0.29
LYSMD4-204ENST00000409796 SH2D4AQ9H788 454 aa16.85■□□□□ 0.29
LYSMD4-204ENST00000409796 SNX12Q9UMY4 172 aa16.85■□□□□ 0.29
LYSMD4-204ENST00000409796 USP17L5A8MUK1 530 aa16.85■□□□□ 0.29
LYSMD4-204ENST00000409796 USO1O60763 962 aaKnown RBP16.85■□□□□ 0.29
LYSMD4-204ENST00000409796 PRPF6O94906 941 aaKnown RBP16.85■□□□□ 0.29
LYSMD4-204ENST00000409796 EIF4A3P38919 411 aaKnown RBP16.85■□□□□ 0.29
LYSMD4-204ENST00000409796 KIF11P52732 1056 aa16.85■□□□□ 0.29
LYSMD4-204ENST00000409796 GRAPQ13588 217 aa16.85■□□□□ 0.29
LYSMD4-204ENST00000409796 CALCRLQ16602 461 aa16.85■□□□□ 0.29
LYSMD4-204ENST00000409796 FAM98CQ17RN3 349 aaKnown RBP16.85■□□□□ 0.29
LYSMD4-204ENST00000409796 GRAPLQ8TC17 118 aaPredicted RBP16.85■□□□□ 0.29
LYSMD4-204ENST00000409796 MMRN2Q9H8L6 949 aa16.85■□□□□ 0.29
LYSMD4-204ENST00000409796 SLC37A4O43826 429 aa16.84■□□□□ 0.29
LYSMD4-204ENST00000409796 MOCS3O95396 460 aa16.84■□□□□ 0.29
LYSMD4-204ENST00000409796 MAN2A1Q16706 1144 aa16.84■□□□□ 0.29
LYSMD4-204ENST00000409796 FOXR1Q6PIV2 292 aa16.84■□□□□ 0.29
LYSMD4-204ENST00000409796 CREG2Q8IUH2 290 aa16.84■□□□□ 0.29
LYSMD4-204ENST00000409796 FNBP4Q8N3X1 1017 aaPredicted RBP16.84■□□□□ 0.29
LYSMD4-204ENST00000409796 TRIM58Q8NG06 486 aa16.84■□□□□ 0.29
LYSMD4-204ENST00000409796 RIN2Q8WYP3 895 aaPredicted RBP16.84■□□□□ 0.29
LYSMD4-204ENST00000409796 LARP4BQ92615 738 aaKnown RBP16.84■□□□□ 0.29
LYSMD4-204ENST00000409796 IQCDQ96DY2 449 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms