RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 STAT2P52630 851 aa7.07□□□□□ -1.28
GTF3C3-202ENST00000409364 UBASH3AP57075 661 aa7.07□□□□□ -1.28
GTF3C3-202ENST00000409364 FANCCQ00597 558 aa7.07□□□□□ -1.28
GTF3C3-202ENST00000409364 RASA3Q14644 834 aa7.07□□□□□ -1.28
GTF3C3-202ENST00000409364 KARSQ15046 597 aaKnown RBP7.07□□□□□ -1.28
GTF3C3-202ENST00000409364 SHROOM1Q2M3G4 852 aaPredicted RBP7.07□□□□□ -1.28
GTF3C3-202ENST00000409364 NBPF9Q3BBW0 867 aa7.07□□□□□ -1.28
GTF3C3-202ENST00000409364 MOXD1Q6UVY6 613 aa7.07□□□□□ -1.28
GTF3C3-202ENST00000409364 IGSF22Q8N9C0 903 aa7.07□□□□□ -1.28
GTF3C3-202ENST00000409364 CCDC47Q96A33 483 aaKnown RBP7.07□□□□□ -1.28
GTF3C3-202ENST00000409364 TMEM39BQ9GZU3 492 aa7.07□□□□□ -1.28
GTF3C3-202ENST00000409364 FANCLQ9NW38 375 aa7.07□□□□□ -1.28
GTF3C3-202ENST00000409364 IFNKQ9P0W0 207 aa7.07□□□□□ -1.28
GTF3C3-202ENST00000409364 LRWD1Q9UFC0 647 aa7.07□□□□□ -1.28
GTF3C3-202ENST00000409364 PGAP2Q9UHJ9 254 aa7.07□□□□□ -1.28
GTF3C3-202ENST00000409364 SCN9AQ15858 1988 aa7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 FZD9O00144 591 aa7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 SLC26A4O43511 780 aa7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 OFD1O75665 1012 aa7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 RPN1P04843 607 aaKnown RBP7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 PTGS1P23219 599 aa7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 KCNB1Q14721 858 aa7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 NOLC1Q14978 699 aaKnown RBP eCLIP7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 UBE2SQ16763 222 aa7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 ZNF658Q5TYW1 1059 aaPredicted RBP7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 SPATA1Q5VX52 437 aa7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 MIGA2Q7L4E1 593 aa7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 FAM160B2Q86V87 743 aa7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 KIAA1524Q8TCG1 905 aa7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 HOOK2Q96ED9 719 aa7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 XPO4Q9C0E2 1151 aaKnown RBP7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 LRRC27Q9C0I9 530 aa7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 HSD3B7Q9H2F3 369 aa7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 VCPKMTQ9H867 229 aa7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 KBTBD4Q9NVX7 518 aa7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 DDX25Q9UHL0 483 aaKnown RBP7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 NRBP1Q9UHY1 535 aa7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 CNOT7Q9UIV1 285 aaKnown RBP7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 PRR12Q9ULL5 1215 aa7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 NFE2L3Q9Y4A8 694 aa7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 CDK5RAP2Q96SN8 1893 aa7.06□□□□□ -1.28
GTF3C3-202ENST00000409364 FOCADQ5VW36 1801 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 PPP1R3GB7ZBB8 358 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 USP17L15C9J2P7 530 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 USP17L13C9JLJ4 530 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 USP17L11C9JVI0 530 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 USP17L18D6R9N7 530 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 USP17L22D6RA61 530 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 USP17L17D6RBQ6 530 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 USP17L19D6RCP7 530 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 USP17L20D6RJB6 530 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 H7C1D1 291 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 MEIS2O14770 477 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 EDIL3O43854 480 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 CTNND1O60716 968 aaKnown RBP7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 ZNF18P17022 549 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 HOXA7P31268 230 aaPredicted RBP7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 PPP1R2P41236 205 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 ECE1P42892 770 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 PSEN2P49810 448 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 GMPSP49915 693 aaPredicted RBP7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 USP17L24Q0WX57 530 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 CUL4BQ13620 913 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 NAALADL2Q58DX5 795 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 KRT79Q5XKE5 535 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 USP17L6PQ6QN14 398 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 SV2BQ7L1I2 683 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 FILIP1Q7Z7B0 1213 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 LRRC8AQ8IWT6 810 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 SPICE1Q8N0Z3 855 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 ACER1Q8TDN7 264 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 STAMQ92783 540 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 CDK5RAP3Q96JB5 506 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 CTAGE1Q96RT6 745 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 NUP88Q99567 741 aaPredicted RBP7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 MTRQ99707 1265 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 BLZF1Q9H2G9 400 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 FEM1BQ9UK73 627 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 PCDHA12Q9UN75 941 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 STK24Q9Y6E0 443 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 MYH6P13533 1939 aa7.05□□□□□ -1.28
GTF3C3-202ENST00000409364 SPDYE3A6NKU9 549 aa7.04□□□□□ -1.28
GTF3C3-202ENST00000409364 PP2D1A8MPX8 630 aa7.04□□□□□ -1.28
GTF3C3-202ENST00000409364 PHF20L1A8MW92 1017 aa7.04□□□□□ -1.28
GTF3C3-202ENST00000409364 PIK3CDO00329 1044 aa7.04□□□□□ -1.28
GTF3C3-202ENST00000409364 TBX3O15119 743 aa7.04□□□□□ -1.28
GTF3C3-202ENST00000409364 SLC37A4O43826 429 aa7.04□□□□□ -1.28
GTF3C3-202ENST00000409364 NRDCO43847 1150 aa7.04□□□□□ -1.28
GTF3C3-202ENST00000409364 RHOBTB3O94955 611 aa7.04□□□□□ -1.28
GTF3C3-202ENST00000409364 TDP2O95551 362 aa7.04□□□□□ -1.28
GTF3C3-202ENST00000409364 ATP1A3P13637 1013 aa7.04□□□□□ -1.28
GTF3C3-202ENST00000409364 PLCG1P19174 1290 aa7.04□□□□□ -1.28
GTF3C3-202ENST00000409364 CASP1P29466 404 aa7.04□□□□□ -1.28
GTF3C3-202ENST00000409364 FMR1Q06787 632 aaKnown RBP eCLIP7.04□□□□□ -1.28
GTF3C3-202ENST00000409364 STIM1Q13586 685 aa7.04□□□□□ -1.28
GTF3C3-202ENST00000409364 SLFN12Q8IYM2 578 aa7.04□□□□□ -1.28
GTF3C3-202ENST00000409364 CACTINQ8WUQ7 758 aaKnown RBP7.04□□□□□ -1.28
GTF3C3-202ENST00000409364 MBOAT7Q96N66 472 aa7.04□□□□□ -1.28
GTF3C3-202ENST00000409364 C7orf25Q9BPX7 421 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms