RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 AIFM3Q96NN9 605 aa19.27■□□□□ 0.67
SMPD4-202ENST00000409031 NDST4Q9H3R1 872 aa19.27■□□□□ 0.67
SMPD4-202ENST00000409031 SLC52A2Q9HAB3 445 aa19.27■□□□□ 0.67
SMPD4-202ENST00000409031 EPSTI1Q96J88 318 aa19.26■□□□□ 0.67
SMPD4-202ENST00000409031 C6orf229H3BNL8 230 aa19.26■□□□□ 0.67
SMPD4-202ENST00000409031 PDE8AO60658 829 aa19.26■□□□□ 0.67
SMPD4-202ENST00000409031 NEK8Q86SG6 692 aa19.26■□□□□ 0.67
SMPD4-202ENST00000409031 RPGRQ92834 1020 aaKnown RBP19.26■□□□□ 0.67
SMPD4-202ENST00000409031 SMCO2A6NFE2 343 aa19.26■□□□□ 0.67
SMPD4-202ENST00000409031 DCTN3O75935 186 aa19.26■□□□□ 0.67
SMPD4-202ENST00000409031 LDHBP07195 334 aaKnown RBP19.26■□□□□ 0.67
SMPD4-202ENST00000409031 KCNQ3O43525 872 aa19.26■□□□□ 0.67
SMPD4-202ENST00000409031 LRRC31Q6UY01 552 aa19.26■□□□□ 0.67
SMPD4-202ENST00000409031 SMC1BQ8NDV3 1235 aa19.26■□□□□ 0.67
SMPD4-202ENST00000409031 ATP10AO60312 1499 aa19.25■□□□□ 0.67
SMPD4-202ENST00000409031 ARHGAP18Q8N392 663 aa19.25■□□□□ 0.67
SMPD4-202ENST00000409031 PANK4Q9NVE7 773 aa19.25■□□□□ 0.67
SMPD4-202ENST00000409031 ATP1A1P05023 1023 aaKnown RBP19.25■□□□□ 0.67
SMPD4-202ENST00000409031 CRYMQ14894 314 aa19.25■□□□□ 0.67
SMPD4-202ENST00000409031 SLC30A9Q6PML9 568 aa19.25■□□□□ 0.67
SMPD4-202ENST00000409031 ZNF496Q96IT1 587 aaPredicted RBP19.25■□□□□ 0.67
SMPD4-202ENST00000409031 NLRP3Q96P20 1036 aa19.25■□□□□ 0.67
SMPD4-202ENST00000409031 FAM167BQ9BTA0 163 aa19.25■□□□□ 0.67
SMPD4-202ENST00000409031 SERPINB6P35237 376 aa19.25■□□□□ 0.67
SMPD4-202ENST00000409031 DR1Q01658 176 aa19.25■□□□□ 0.67
SMPD4-202ENST00000409031 CHRNA2Q15822 529 aa19.25■□□□□ 0.67
SMPD4-202ENST00000409031 ABTB1Q969K4 478 aaPredicted RBP19.25■□□□□ 0.67
SMPD4-202ENST00000409031 TAF1DQ9H5J8 278 aaPredicted RBP19.25■□□□□ 0.67
SMPD4-202ENST00000409031 COMMD10Q9Y6G5 202 aa19.25■□□□□ 0.67
SMPD4-202ENST00000409031 GRID2IPA4D2P6 1211 aa19.25■□□□□ 0.67
SMPD4-202ENST00000409031 PCP11498 1178 aaKnown RBP19.25■□□□□ 0.67
SMPD4-202ENST00000409031 GPBP1Q86WP2 473 aa19.25■□□□□ 0.67
SMPD4-202ENST00000409031 CCDC89Q8N998 374 aa19.25■□□□□ 0.67
SMPD4-202ENST00000409031 MROH5Q6ZUA9 1318 aa19.25■□□□□ 0.67
SMPD4-202ENST00000409031 MYCT1Q8N699 235 aa19.24■□□□□ 0.67
SMPD4-202ENST00000409031 HAUS1Q96CS2 278 aa19.24■□□□□ 0.67
SMPD4-202ENST00000409031 FNBP1Q96RU3 617 aa19.24■□□□□ 0.67
SMPD4-202ENST00000409031 USTQ9Y2C2 406 aa19.24■□□□□ 0.67
SMPD4-202ENST00000409031 TNRQ92752 1358 aa19.24■□□□□ 0.67
SMPD4-202ENST00000409031 CFAP74Q9C0B2 1584 aa19.24■□□□□ 0.67
SMPD4-202ENST00000409031 IFNB1P01574 187 aa19.24■□□□□ 0.67
SMPD4-202ENST00000409031 CHGBP05060 677 aa19.24■□□□□ 0.67
SMPD4-202ENST00000409031 CTAGE3PQ8IX95 158 aa19.24■□□□□ 0.67
SMPD4-202ENST00000409031 PPP4R1Q8TF05 950 aa19.24■□□□□ 0.67
SMPD4-202ENST00000409031 PITPNM3Q9BZ71 974 aa19.24■□□□□ 0.67
SMPD4-202ENST00000409031 L1RE1Q9UN81 338 aa19.24■□□□□ 0.67
SMPD4-202ENST00000409031 NIP7Q9Y221 180 aaKnown RBP eCLIP19.24■□□□□ 0.67
SMPD4-202ENST00000409031 EXOC5O00471 708 aa19.24■□□□□ 0.67
SMPD4-202ENST00000409031 TC2NQ8N9U0 490 aa19.24■□□□□ 0.67
SMPD4-202ENST00000409031 MMS19Q96T76 1030 aa19.24■□□□□ 0.67
SMPD4-202ENST00000409031 IRAK4Q9NWZ3 460 aa19.24■□□□□ 0.67
SMPD4-202ENST00000409031 DONSONQ9NYP3 566 aa19.24■□□□□ 0.67
SMPD4-202ENST00000409031 GMNNO75496 209 aa19.24■□□□□ 0.67
SMPD4-202ENST00000409031 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.24■□□□□ 0.67
SMPD4-202ENST00000409031 RIN2Q8WYP3 895 aaPredicted RBP19.24■□□□□ 0.67
SMPD4-202ENST00000409031 A0A1B0GTH6 734 aa19.23■□□□□ 0.67
SMPD4-202ENST00000409031 TTC26A0AVF1 554 aa19.23■□□□□ 0.67
SMPD4-202ENST00000409031 ECEL1O95672 775 aa19.23■□□□□ 0.67
SMPD4-202ENST00000409031 LSP1P33241 339 aa19.23■□□□□ 0.67
SMPD4-202ENST00000409031 TFAP4Q01664 338 aa19.23■□□□□ 0.67
SMPD4-202ENST00000409031 AP1M1Q9BXS5 423 aa19.23■□□□□ 0.67
SMPD4-202ENST00000409031 N4BP1O75113 896 aaKnown RBP19.23■□□□□ 0.67
SMPD4-202ENST00000409031 LMNB2Q03252 620 aa19.23■□□□□ 0.67
SMPD4-202ENST00000409031 REXO1L1PQ8IX06 675 aa19.23■□□□□ 0.67
SMPD4-202ENST00000409031 ASXL2Q76L83 1435 aa19.23■□□□□ 0.67
SMPD4-202ENST00000409031 M0R2C6 588 aa19.23■□□□□ 0.67
SMPD4-202ENST00000409031 ARL6IP4Q66PJ3 421 aaKnown RBP19.23■□□□□ 0.67
SMPD4-202ENST00000409031 ZNF449Q6P9G9 518 aa19.23■□□□□ 0.67
SMPD4-202ENST00000409031 DCUN1D2Q6PH85 259 aa19.23■□□□□ 0.67
SMPD4-202ENST00000409031 ZC3H18Q86VM9 953 aaKnown RBP19.23■□□□□ 0.67
SMPD4-202ENST00000409031 COL4A3BPQ9Y5P4 624 aa19.23■□□□□ 0.67
SMPD4-202ENST00000409031 OSBP2Q969R2 916 aa19.23■□□□□ 0.67
SMPD4-202ENST00000409031 DDX23Q9BUQ8 820 aaKnown RBP19.23■□□□□ 0.67
SMPD4-202ENST00000409031 HAUS2Q9NVX0 235 aa19.23■□□□□ 0.67
SMPD4-202ENST00000409031 EXOC7Q9UPT5 735 aa19.23■□□□□ 0.67
SMPD4-202ENST00000409031 A0A1W2PQC6 194 aa19.22■□□□□ 0.67
SMPD4-202ENST00000409031 POC1B-GALNT4F8VUJ3 575 aa19.22■□□□□ 0.67
SMPD4-202ENST00000409031 CIAO1O76071 339 aa19.22■□□□□ 0.67
SMPD4-202ENST00000409031 TRIM42Q8IWZ5 723 aa19.22■□□□□ 0.67
SMPD4-202ENST00000409031 SGSM3Q96HU1 749 aa19.22■□□□□ 0.67
SMPD4-202ENST00000409031 TUBE1Q9UJT0 475 aa19.22■□□□□ 0.67
SMPD4-202ENST00000409031 ARHGEF35A5YM69 484 aa19.22■□□□□ 0.67
SMPD4-202ENST00000409031 PLCB4Q15147 1175 aa19.22■□□□□ 0.67
SMPD4-202ENST00000409031 RBM43Q6ZSC3 357 aaKnown RBP19.22■□□□□ 0.67
SMPD4-202ENST00000409031 ANKRD2Q9GZV1 360 aa19.22■□□□□ 0.67
SMPD4-202ENST00000409031 GJB4Q9NTQ9 266 aa19.22■□□□□ 0.67
SMPD4-202ENST00000409031 ADAMTS1Q9UHI8 967 aa19.22■□□□□ 0.67
SMPD4-202ENST00000409031 SNX12Q9UMY4 172 aa19.22■□□□□ 0.67
SMPD4-202ENST00000409031 PTPN22Q9Y2R2 807 aa19.22■□□□□ 0.67
SMPD4-202ENST00000409031 PODXLO00592 558 aa19.22■□□□□ 0.67
SMPD4-202ENST00000409031 PPP1R12AO14974 1030 aaPredicted RBP19.22■□□□□ 0.67
SMPD4-202ENST00000409031 PALMO75781 387 aa19.22■□□□□ 0.67
SMPD4-202ENST00000409031 PDHA1P08559 390 aa19.22■□□□□ 0.67
SMPD4-202ENST00000409031 LRRC24Q50LG9 513 aa19.22■□□□□ 0.67
SMPD4-202ENST00000409031 NME8Q8N427 588 aa19.22■□□□□ 0.67
SMPD4-202ENST00000409031 LARP4BQ92615 738 aaKnown RBP19.22■□□□□ 0.67
SMPD4-202ENST00000409031 ESYT3A0FGR9 886 aa19.21■□□□□ 0.67
SMPD4-202ENST00000409031 SMTNP53814 917 aa19.21■□□□□ 0.67
SMPD4-202ENST00000409031 NFRKBQ6P4R8 1299 aa19.21■□□□□ 0.67
SMPD4-202ENST00000409031 SHC4Q6S5L8 630 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms