RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 ZNF592Q92610 1267 aa11.26□□□□□ -0.61
NIF3L1-202ENST00000409020 UBAC1Q9BSL1 405 aa11.26□□□□□ -0.61
NIF3L1-202ENST00000409020 KRT23Q9C075 422 aa11.26□□□□□ -0.61
NIF3L1-202ENST00000409020 UPF3AQ9H1J1 476 aaKnown RBP11.26□□□□□ -0.61
NIF3L1-202ENST00000409020 JMJD4Q9H9V9 463 aa11.26□□□□□ -0.61
NIF3L1-202ENST00000409020 VAT1LQ9HCJ6 419 aa11.26□□□□□ -0.61
NIF3L1-202ENST00000409020 GPHNQ9NQX3 736 aaPredicted RBP11.26□□□□□ -0.61
NIF3L1-202ENST00000409020 GNEQ9Y223 722 aaKnown RBP11.26□□□□□ -0.61
NIF3L1-202ENST00000409020 WDR19Q8NEZ3 1342 aa11.25□□□□□ -0.61
NIF3L1-202ENST00000409020 A0A1W2PPC1 479 aa11.25□□□□□ -0.61
NIF3L1-202ENST00000409020 ASB14A6NK59 587 aa11.25□□□□□ -0.61
NIF3L1-202ENST00000409020 E7EWF7 191 aa11.25□□□□□ -0.61
NIF3L1-202ENST00000409020 STK25O00506 426 aa11.25□□□□□ -0.61
NIF3L1-202ENST00000409020 TNFAIP2Q03169 654 aa11.25□□□□□ -0.61
NIF3L1-202ENST00000409020 IFIT1BQ5T764 474 aaKnown RBP11.25□□□□□ -0.61
NIF3L1-202ENST00000409020 C1orf53Q5VUE5 145 aa11.25□□□□□ -0.61
NIF3L1-202ENST00000409020 RNF207Q6ZRF8 634 aa11.25□□□□□ -0.61
NIF3L1-202ENST00000409020 MORC4Q8TE76 937 aa11.25□□□□□ -0.61
NIF3L1-202ENST00000409020 BADQ92934 168 aa11.25□□□□□ -0.61
NIF3L1-202ENST00000409020 CNNM2Q9H8M5 875 aa11.25□□□□□ -0.61
NIF3L1-202ENST00000409020 STARD7Q9NQZ5 370 aa11.25□□□□□ -0.61
NIF3L1-202ENST00000409020 COL20A1Q9P218 1284 aa11.25□□□□□ -0.61
NIF3L1-202ENST00000409020 MAD2L2Q9UI95 211 aa11.25□□□□□ -0.61
NIF3L1-202ENST00000409020 VGLL3A8MV65 326 aa11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 PPP1R11O60927 126 aaPredicted RBP11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 PARP1P09874 1014 aaKnown RBP11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 CST5P28325 142 aaPredicted RBP11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 ANTXR2P58335 489 aa11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 QRICH1Q2TAL8 776 aa11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 GNASQ5JWF2 1037 aa11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 C9orf50Q5SZB4 431 aa11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 NOL8Q76FK4 1167 aaKnown RBP11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 Q7L0L9 218 aa11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 TLK2Q86UE8 772 aa11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 RUFY2Q8WXA3 655 aa11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 MAP4K1Q92918 833 aa11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 LSG1Q9H089 658 aaKnown RBP11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 RBM8AQ9Y5S9 174 aaKnown RBP11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 MOXD2PA6NHM9 499 aa11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 OPLAHO14841 1288 aa11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 DYNC1LI2O43237 492 aaPredicted RBP11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 EPHB4P54760 987 aa11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 FAAP100Q0VG06 881 aa11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 ASPRV1Q53RT3 343 aa11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 CXCL17Q6UXB2 119 aa11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 KIAA1211Q6ZU35 1233 aa11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 TSEN34Q9BSV6 310 aaKnown RBP11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 GEMIN8Q9NWZ8 242 aaKnown RBP11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 PRKAG2Q9UGJ0 569 aa11.24□□□□□ -0.61
NIF3L1-202ENST00000409020 GRIN2DO15399 1336 aa11.23□□□□□ -0.61
NIF3L1-202ENST00000409020 RBAK-RBAKDNI3L0D1 243 aa11.23□□□□□ -0.61
NIF3L1-202ENST00000409020 IFIT3O14879 490 aaKnown RBP11.23□□□□□ -0.61
NIF3L1-202ENST00000409020 DHX16O60231 1041 aaKnown RBP11.23□□□□□ -0.61
NIF3L1-202ENST00000409020 CLTBP09497 229 aa11.23□□□□□ -0.61
NIF3L1-202ENST00000409020 LRIT3Q3SXY7 679 aa11.23□□□□□ -0.61
NIF3L1-202ENST00000409020 CCDC178Q5BJE1 867 aa11.23□□□□□ -0.61
NIF3L1-202ENST00000409020 ANKRD33Q7Z3H0 272 aa11.23□□□□□ -0.61
NIF3L1-202ENST00000409020 MB21D2Q8IYB1 491 aaPredicted RBP11.23□□□□□ -0.61
NIF3L1-202ENST00000409020 PPP1R13LQ8WUF5 828 aa11.23□□□□□ -0.61
NIF3L1-202ENST00000409020 LBHD1Q9BQE6 289 aaPredicted RBP11.23□□□□□ -0.61
NIF3L1-202ENST00000409020 ESYT1Q9BSJ8 1104 aa11.23□□□□□ -0.61
NIF3L1-202ENST00000409020 VTA1Q9NP79 307 aa11.23□□□□□ -0.61
NIF3L1-202ENST00000409020 TRANK1O15050 2925 aa11.22□□□□□ -0.61
NIF3L1-202ENST00000409020 PALM3A6NDB9 673 aaPredicted RBP11.22□□□□□ -0.61
NIF3L1-202ENST00000409020 CYTH3O43739 400 aa11.22□□□□□ -0.61
NIF3L1-202ENST00000409020 ARIH2O95376 493 aa11.22□□□□□ -0.61
NIF3L1-202ENST00000409020 EDNRBP24530 442 aa11.22□□□□□ -0.61
NIF3L1-202ENST00000409020 NT5C2P49902 561 aa11.22□□□□□ -0.61
NIF3L1-202ENST00000409020 CDK7P50613 346 aa11.22□□□□□ -0.61
NIF3L1-202ENST00000409020 PSMC6P62333 389 aa11.22□□□□□ -0.61
NIF3L1-202ENST00000409020 NKX3-2P78367 333 aa11.22□□□□□ -0.61
NIF3L1-202ENST00000409020 TRDNQ13061 729 aa11.22□□□□□ -0.61
NIF3L1-202ENST00000409020 SHHQ15465 462 aa11.22□□□□□ -0.61
NIF3L1-202ENST00000409020 FSCN1Q16658 493 aaKnown RBP11.22□□□□□ -0.61
NIF3L1-202ENST00000409020 NUP133Q8WUM0 1156 aa11.22□□□□□ -0.61
NIF3L1-202ENST00000409020 COPS5Q92905 334 aa11.22□□□□□ -0.61
NIF3L1-202ENST00000409020 GLT1D1Q96MS3 346 aa11.22□□□□□ -0.61
NIF3L1-202ENST00000409020 TAAR1Q96RJ0 339 aa11.22□□□□□ -0.61
NIF3L1-202ENST00000409020 MYL10Q9BUA6 226 aa11.22□□□□□ -0.61
NIF3L1-202ENST00000409020 WDR11Q9BZH6 1224 aa11.22□□□□□ -0.61
NIF3L1-202ENST00000409020 ADD3Q9UEY8 706 aaKnown RBP11.22□□□□□ -0.61
NIF3L1-202ENST00000409020 KLRF2D3W0D1 207 aa11.21□□□□□ -0.61
NIF3L1-202ENST00000409020 ZSCAN20P17040 1043 aaPredicted RBP11.21□□□□□ -0.61
NIF3L1-202ENST00000409020 TROAPQ12815 778 aa11.21□□□□□ -0.61
NIF3L1-202ENST00000409020 CENPQQ7L2Z9 268 aaPredicted RBP11.21□□□□□ -0.61
NIF3L1-202ENST00000409020 RALYLQ86SE5 291 aaKnown RBP11.21□□□□□ -0.61
NIF3L1-202ENST00000409020 HOMER1Q86YM7 354 aa11.21□□□□□ -0.61
NIF3L1-202ENST00000409020 SYTL5Q8TDW5 730 aaPredicted RBP11.21□□□□□ -0.61
NIF3L1-202ENST00000409020 IGDCC4Q8TDY8 1250 aa11.21□□□□□ -0.61
NIF3L1-202ENST00000409020 VTI1AQ96AJ9 217 aa11.21□□□□□ -0.61
NIF3L1-202ENST00000409020 SPC25Q9HBM1 224 aa11.21□□□□□ -0.61
NIF3L1-202ENST00000409020 TMEM39AQ9NV64 488 aa11.21□□□□□ -0.61
NIF3L1-202ENST00000409020 ELP1O95163 1332 aa11.21□□□□□ -0.62
NIF3L1-202ENST00000409020 ABCB11O95342 1321 aa11.21□□□□□ -0.62
NIF3L1-202ENST00000409020 SLC27A2O14975 620 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 KIAA0355O15063 1070 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 GTPBP6O43824 516 aaPredicted RBP11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 PDE4DQ08499 809 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 GRM4Q14833 912 aa11.2□□□□□ -0.62
NIF3L1-202ENST00000409020 WTAPQ15007 396 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms