RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 IL17AQ16552 155 aa18.17■□□□□ 0.5
CDK11B-204ENST00000407249 TMC4Q7Z404 712 aa18.17■□□□□ 0.5
CDK11B-204ENST00000407249 CCDC24Q8N4L8 307 aa18.17■□□□□ 0.5
CDK11B-204ENST00000407249 RMND1Q9NWS8 449 aa18.17■□□□□ 0.5
CDK11B-204ENST00000407249 LUC7L2Q9Y383 392 aaKnown RBP18.17■□□□□ 0.5
CDK11B-204ENST00000407249 ZC3H4Q9UPT8 1303 aaKnown RBP18.17■□□□□ 0.5
CDK11B-204ENST00000407249 BRWD3Q6RI45 1802 aa18.17■□□□□ 0.5
CDK11B-204ENST00000407249 MYH6P13533 1939 aa18.17■□□□□ 0.5
CDK11B-204ENST00000407249 TARSL2A2RTX5 802 aaKnown RBP18.17■□□□□ 0.5
CDK11B-204ENST00000407249 ORC4O43929 436 aa18.17■□□□□ 0.5
CDK11B-204ENST00000407249 RPN1P04843 607 aaKnown RBP18.17■□□□□ 0.5
CDK11B-204ENST00000407249 SERPINB2P05120 415 aa18.17■□□□□ 0.5
CDK11B-204ENST00000407249 ATP2B4P23634 1241 aa18.17■□□□□ 0.5
CDK11B-204ENST00000407249 HERVK_113P62684 666 aa18.17■□□□□ 0.5
CDK11B-204ENST00000407249 TROAPQ12815 778 aa18.17■□□□□ 0.5
CDK11B-204ENST00000407249 CATIPQ7Z7H3 387 aa18.17■□□□□ 0.5
CDK11B-204ENST00000407249 MB21D1Q8N884 522 aa18.17■□□□□ 0.5
CDK11B-204ENST00000407249 MAPK8IP1Q9UQF2 711 aa18.17■□□□□ 0.5
CDK11B-204ENST00000407249 GDAQ9Y2T3 454 aa18.17■□□□□ 0.5
CDK11B-204ENST00000407249 PARP1P09874 1014 aaKnown RBP18.16■□□□□ 0.5
CDK11B-204ENST00000407249 RBBP5Q15291 538 aaKnown RBP18.16■□□□□ 0.5
CDK11B-204ENST00000407249 CCDC122Q5T0U0 273 aa18.16■□□□□ 0.5
CDK11B-204ENST00000407249 WDR59Q6PJI9 974 aa18.16■□□□□ 0.5
CDK11B-204ENST00000407249 GBP6Q6ZN66 633 aa18.16■□□□□ 0.5
CDK11B-204ENST00000407249 DZIP1Q86YF9 867 aaKnown RBP18.16■□□□□ 0.5
CDK11B-204ENST00000407249 ARMC2Q8NEN0 867 aa18.16■□□□□ 0.5
CDK11B-204ENST00000407249 AFAP1L1Q8TED9 768 aa18.16■□□□□ 0.5
CDK11B-204ENST00000407249 COG1Q8WTW3 980 aa18.16■□□□□ 0.5
CDK11B-204ENST00000407249 TMX4Q9H1E5 349 aaPredicted RBP18.16■□□□□ 0.5
CDK11B-204ENST00000407249 A0A1W2PQC6 194 aa18.16■□□□□ 0.5
CDK11B-204ENST00000407249 SRGAP2O75044 1071 aa18.16■□□□□ 0.5
CDK11B-204ENST00000407249 CALM1P0DP23 149 aa18.16■□□□□ 0.5
CDK11B-204ENST00000407249 CALM2P0DP24 149 aa18.16■□□□□ 0.5
CDK11B-204ENST00000407249 CALM3P0DP25 149 aa18.16■□□□□ 0.5
CDK11B-204ENST00000407249 IFIT1BQ5T764 474 aaKnown RBP18.16■□□□□ 0.5
CDK11B-204ENST00000407249 ZNF662Q6ZS27 426 aa18.16■□□□□ 0.5
CDK11B-204ENST00000407249 IQCA1Q86XH1 822 aa18.16■□□□□ 0.5
CDK11B-204ENST00000407249 RPGRIP1Q96KN7 1286 aa18.16■□□□□ 0.5
CDK11B-204ENST00000407249 LGALS16A8MUM7 142 aa18.16■□□□□ 0.5
CDK11B-204ENST00000407249 BBOX1O75936 387 aa18.16■□□□□ 0.5
CDK11B-204ENST00000407249 HOXA10P31260 410 aaPredicted RBP18.16■□□□□ 0.5
CDK11B-204ENST00000407249 ZNF507Q8TCN5 953 aa18.16■□□□□ 0.5
CDK11B-204ENST00000407249 MMTAG2Q9BU76 263 aaKnown RBP18.16■□□□□ 0.5
CDK11B-204ENST00000407249 CAPN11Q9UMQ6 739 aa18.16■□□□□ 0.5
CDK11B-204ENST00000407249 TFR2Q9UP52 801 aa18.16■□□□□ 0.5
CDK11B-204ENST00000407249 TRAPPC10P48553 1259 aa18.15■□□□□ 0.5
CDK11B-204ENST00000407249 CCNHP51946 323 aaPredicted RBP18.15■□□□□ 0.5
CDK11B-204ENST00000407249 NEDD9Q14511 834 aa18.15■□□□□ 0.5
CDK11B-204ENST00000407249 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.15■□□□□ 0.5
CDK11B-204ENST00000407249 LRRC37AA6NMS7 1700 aa18.15■□□□□ 0.5
CDK11B-204ENST00000407249 PPFIA4O75335 1185 aa18.15■□□□□ 0.5
CDK11B-204ENST00000407249 OATP04181 439 aa18.15■□□□□ 0.5
CDK11B-204ENST00000407249 LDHBP07195 334 aaKnown RBP18.15■□□□□ 0.5
CDK11B-204ENST00000407249 LDHCP07864 332 aa18.15■□□□□ 0.5
CDK11B-204ENST00000407249 NAP1L1P55209 391 aaKnown RBP18.15■□□□□ 0.5
CDK11B-204ENST00000407249 CRYMQ14894 314 aa18.15■□□□□ 0.5
CDK11B-204ENST00000407249 PIK3AP1Q6ZUJ8 805 aa18.15■□□□□ 0.5
CDK11B-204ENST00000407249 TMTC3Q6ZXV5 915 aa18.15■□□□□ 0.5
CDK11B-204ENST00000407249 NCAPG2Q86XI2 1143 aa18.15■□□□□ 0.5
CDK11B-204ENST00000407249 CRAMP1Q96RY5 1269 aa18.15■□□□□ 0.5
CDK11B-204ENST00000407249 SLX1AQ9BQ83 275 aa18.15■□□□□ 0.5
CDK11B-204ENST00000407249 BLOC1S6Q9UL45 172 aa18.15■□□□□ 0.5
CDK11B-204ENST00000407249 TRIM49BA6NDI0 452 aa18.14■□□□□ 0.49
CDK11B-204ENST00000407249 AP1G2O75843 785 aa18.14■□□□□ 0.49
CDK11B-204ENST00000407249 PRDX5P30044 214 aa18.14■□□□□ 0.49
CDK11B-204ENST00000407249 MCM7P33993 719 aa18.14■□□□□ 0.49
CDK11B-204ENST00000407249 KRT83P78385 493 aa18.14■□□□□ 0.49
CDK11B-204ENST00000407249 ADSSL1Q8N142 457 aa18.14■□□□□ 0.49
CDK11B-204ENST00000407249 EHBP1Q8NDI1 1231 aa18.14■□□□□ 0.49
CDK11B-204ENST00000407249 DCP1AQ9NPI6 582 aaPredicted RBP18.14■□□□□ 0.49
CDK11B-204ENST00000407249 SNUPNO95149 360 aaKnown RBP18.14■□□□□ 0.49
CDK11B-204ENST00000407249 STIM1Q13586 685 aa18.14■□□□□ 0.49
CDK11B-204ENST00000407249 MEA1Q16626 185 aa18.14■□□□□ 0.49
CDK11B-204ENST00000407249 TSR1Q2NL82 804 aaKnown RBP18.14■□□□□ 0.49
CDK11B-204ENST00000407249 JAKMIP2Q96AA8 810 aa18.14■□□□□ 0.49
CDK11B-204ENST00000407249 KLRG2A4D1S0 409 aaPredicted RBP18.13■□□□□ 0.49
CDK11B-204ENST00000407249 DDAH1O94760 285 aa18.13■□□□□ 0.49
CDK11B-204ENST00000407249 EEF1GP26641 437 aaKnown RBP18.13■□□□□ 0.49
CDK11B-204ENST00000407249 PMS1P54277 932 aaKnown RBP18.13■□□□□ 0.49
CDK11B-204ENST00000407249 CKAP4Q07065 602 aaKnown RBP18.13■□□□□ 0.49
CDK11B-204ENST00000407249 TADA2BQ86TJ2 420 aa18.13■□□□□ 0.49
CDK11B-204ENST00000407249 TXNRD3Q86VQ6 643 aa18.13■□□□□ 0.49
CDK11B-204ENST00000407249 RIN2Q8WYP3 895 aaPredicted RBP18.13■□□□□ 0.49
CDK11B-204ENST00000407249 CAPZA3Q96KX2 299 aa18.13■□□□□ 0.49
CDK11B-204ENST00000407249 CNTNAP5Q8WYK1 1306 aa18.13■□□□□ 0.49
CDK11B-204ENST00000407249 BAZ2AQ9UIF9 1905 aaKnown RBP18.13■□□□□ 0.49
CDK11B-204ENST00000407249 USP17L12C9JPN9 530 aa18.13■□□□□ 0.49
CDK11B-204ENST00000407249 USP17L21D6R901 530 aa18.13■□□□□ 0.49
CDK11B-204ENST00000407249 KRT86O43790 486 aa18.13■□□□□ 0.49
CDK11B-204ENST00000407249 SUN2Q9UH99 717 aa18.13■□□□□ 0.49
CDK11B-204ENST00000407249 ZMYND10O75800 440 aa18.12■□□□□ 0.49
CDK11B-204ENST00000407249 BAG3O95817 575 aa18.12■□□□□ 0.49
CDK11B-204ENST00000407249 ARL6IP4Q66PJ3 421 aaKnown RBP18.12■□□□□ 0.49
CDK11B-204ENST00000407249 SRBD1Q8N5C6 995 aaKnown RBP18.12■□□□□ 0.49
CDK11B-204ENST00000407249 GDAP1L1Q96MZ0 367 aa18.12■□□□□ 0.49
CDK11B-204ENST00000407249 LACRTQ9GZZ8 138 aa18.12■□□□□ 0.49
CDK11B-204ENST00000407249 GGA1Q9UJY5 639 aa18.12■□□□□ 0.49
CDK11B-204ENST00000407249 A0A087WUV0 522 aaPredicted RBP18.12■□□□□ 0.49
CDK11B-204ENST00000407249 IMPDH2P12268 514 aa18.12■□□□□ 0.49
CDK11B-204ENST00000407249 LONP1P36776 959 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms