RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 HAUS4Q9H6D7 363 aa11.01□□□□□ -0.65
MSH2-202ENST00000406134 PCDHA2Q9Y5H9 948 aa11.01□□□□□ -0.65
MSH2-202ENST00000406134 CAPN6Q9Y6Q1 641 aa11.01□□□□□ -0.65
MSH2-202ENST00000406134 BAG3O95817 575 aa11□□□□□ -0.65
MSH2-202ENST00000406134 GYS1P13807 737 aa11□□□□□ -0.65
MSH2-202ENST00000406134 USP14P54578 494 aa11□□□□□ -0.65
MSH2-202ENST00000406134 CYP27A1Q02318 531 aa11□□□□□ -0.65
MSH2-202ENST00000406134 MCM6Q14566 821 aa11□□□□□ -0.65
MSH2-202ENST00000406134 ZNF572Q7Z3I7 529 aaPredicted RBP11□□□□□ -0.65
MSH2-202ENST00000406134 DNAJC19Q96DA6 116 aa11□□□□□ -0.65
MSH2-202ENST00000406134 P2RX7Q99572 595 aaKnown RBP11□□□□□ -0.65
MSH2-202ENST00000406134 SLC39A2Q9NP94 309 aa11□□□□□ -0.65
MSH2-202ENST00000406134 MTMR4Q9NYA4 1195 aa11□□□□□ -0.65
MSH2-202ENST00000406134 ADAM21Q9UKJ8 722 aa11□□□□□ -0.65
MSH2-202ENST00000406134 DAGLAQ9Y4D2 1042 aa11□□□□□ -0.65
MSH2-202ENST00000406134 TULP2O00295 520 aa11□□□□□ -0.65
MSH2-202ENST00000406134 AKR1B1P15121 316 aa11□□□□□ -0.65
MSH2-202ENST00000406134 ZBED6P86452 979 aa11□□□□□ -0.65
MSH2-202ENST00000406134 KCNMA1Q12791 1236 aa11□□□□□ -0.65
MSH2-202ENST00000406134 DPY19L2P1Q6NXN4 242 aa11□□□□□ -0.65
MSH2-202ENST00000406134 FAM196AQ6ZSG2 479 aa11□□□□□ -0.65
MSH2-202ENST00000406134 TEX11Q8IYF3 940 aa11□□□□□ -0.65
MSH2-202ENST00000406134 TBC1D16Q8TBP0 767 aa11□□□□□ -0.65
MSH2-202ENST00000406134 NOC3LQ8WTT2 800 aaKnown RBP11□□□□□ -0.65
MSH2-202ENST00000406134 MTMR8Q96EF0 704 aa11□□□□□ -0.65
MSH2-202ENST00000406134 SYF2O95926 243 aaKnown RBP10.99□□□□□ -0.65
MSH2-202ENST00000406134 CASP8Q14790 479 aa10.99□□□□□ -0.65
MSH2-202ENST00000406134 SHROOM1Q2M3G4 852 aaPredicted RBP10.99□□□□□ -0.65
MSH2-202ENST00000406134 HGSNATQ68CP4 663 aa10.99□□□□□ -0.65
MSH2-202ENST00000406134 CCDC155Q8N6L0 562 aa10.99□□□□□ -0.65
MSH2-202ENST00000406134 C8orf37Q96NL8 207 aa10.99□□□□□ -0.65
MSH2-202ENST00000406134 KLRG2A4D1S0 409 aaPredicted RBP10.99□□□□□ -0.65
MSH2-202ENST00000406134 NOL4O94818 638 aa10.99□□□□□ -0.65
MSH2-202ENST00000406134 PRPF6O94906 941 aaKnown RBP10.99□□□□□ -0.65
MSH2-202ENST00000406134 DDR1Q08345 913 aa10.99□□□□□ -0.65
MSH2-202ENST00000406134 CREG2Q8IUH2 290 aa10.99□□□□□ -0.65
MSH2-202ENST00000406134 CNBD1Q8NA66 436 aa10.99□□□□□ -0.65
MSH2-202ENST00000406134 PSD3Q9NYI0 1048 aa10.99□□□□□ -0.65
MSH2-202ENST00000406134 PLAGL2Q9UPG8 496 aa10.99□□□□□ -0.65
MSH2-202ENST00000406134 PSME4Q14997 1843 aa10.99□□□□□ -0.65
MSH2-202ENST00000406134 UFL1O94874 794 aa10.99□□□□□ -0.65
MSH2-202ENST00000406134 ASIC1P78348 528 aa10.99□□□□□ -0.65
MSH2-202ENST00000406134 ORC2Q13416 577 aaPredicted RBP10.99□□□□□ -0.65
MSH2-202ENST00000406134 JMJD4Q9H9V9 463 aa10.99□□□□□ -0.65
MSH2-202ENST00000406134 CTAGE15A4D2H0 777 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 CTAGE8P0CG41 777 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 UNC13DQ70J99 1090 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 CTAGE6Q86UF2 777 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 CTAGE4Q8IX94 777 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 DHX37Q8IY37 1157 aaKnown RBP10.98□□□□□ -0.65
MSH2-202ENST00000406134 REXO1Q8N1G1 1221 aaKnown RBP10.98□□□□□ -0.65
MSH2-202ENST00000406134 LRRC47Q8N1G4 583 aaKnown RBP10.98□□□□□ -0.65
MSH2-202ENST00000406134 RETREG2Q8NC44 543 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 RAD54LQ92698 747 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 RRP36Q96EU6 259 aaKnown RBP10.98□□□□□ -0.65
MSH2-202ENST00000406134 DNAJC18Q9H819 358 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 ATF5Q9Y2D1 282 aaPredicted RBP10.98□□□□□ -0.65
MSH2-202ENST00000406134 AGPSO00116 658 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 CAPN2P17655 700 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 SHMT1P34896 483 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 TXKP42681 527 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 VWA3BQ502W6 1294 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 CCDC122Q5T0U0 273 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 CCDC170Q8IYT3 715 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 JAKMIP2Q96AA8 810 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 TLR2O60603 784 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 PIP4K2BP78356 416 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 TBC1D8BQ0IIM8 1120 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 UBE2SQ16763 222 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 MFSD14BQ5SR56 506 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 TTBK2Q6IQ55 1244 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 MXD3Q9BW11 206 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 SH2D4AQ9H788 454 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 VAT1LQ9HCJ6 419 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 C6orf50Q9HD87 102 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 LRWD1Q9UFC0 647 aa10.98□□□□□ -0.65
MSH2-202ENST00000406134 HOXA10P31260 410 aaPredicted RBP10.97□□□□□ -0.65
MSH2-202ENST00000406134 AARSP49588 968 aaKnown RBP eCLIP10.97□□□□□ -0.65
MSH2-202ENST00000406134 HDXQ7Z353 690 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 GSPT2Q8IYD1 628 aaKnown RBP10.97□□□□□ -0.65
MSH2-202ENST00000406134 CRYGNQ8WXF5 182 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 NOC4LQ9BVI4 516 aaKnown RBP10.97□□□□□ -0.65
MSH2-202ENST00000406134 MLXIPQ9HAP2 919 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 GNA11P29992 359 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 VAV2P52735 878 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 APBA1Q02410 837 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 EZH2Q15910 746 aaKnown RBP10.97□□□□□ -0.65
MSH2-202ENST00000406134 MUM1L1Q5H9M0 696 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 HYIQ5T013 277 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 ZC3H3Q8IXZ2 948 aaKnown RBP10.97□□□□□ -0.65
MSH2-202ENST00000406134 ADGRF4Q8IZF3 695 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 ANKRD20A12PQ8NF67 263 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 LARP4BQ92615 738 aaKnown RBP10.97□□□□□ -0.65
MSH2-202ENST00000406134 SAR1BQ9Y6B6 198 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 ABCB11O95342 1321 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 BICDL2A1A5D9 508 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 POTEB2H3BUK9 544 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 ATP2B2Q01814 1243 aa10.97□□□□□ -0.65
MSH2-202ENST00000406134 MAPK8IP2Q13387 824 aaPredicted RBP10.97□□□□□ -0.65
MSH2-202ENST00000406134 CALCRLQ16602 461 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms