RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 TACR1P25103 407 aa7.07□□□□□ -1.28
HMGB1P13-201ENST00000406019 HOXC12P31275 282 aa7.07□□□□□ -1.28
HMGB1P13-201ENST00000406019 RAP1GAPP47736 663 aa7.07□□□□□ -1.28
HMGB1P13-201ENST00000406019 CDR1P51861 262 aa7.07□□□□□ -1.28
HMGB1P13-201ENST00000406019 EPHB3P54753 998 aa7.07□□□□□ -1.28
HMGB1P13-201ENST00000406019 PPP2R2AP63151 447 aa7.07□□□□□ -1.28
HMGB1P13-201ENST00000406019 PRSS53Q2L4Q9 553 aa7.07□□□□□ -1.28
HMGB1P13-201ENST00000406019 ACBD5Q5T8D3 534 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P13-201ENST00000406019 ATG14Q6ZNE5 492 aa7.07□□□□□ -1.28
HMGB1P13-201ENST00000406019 Q8N1Y9 231 aa7.07□□□□□ -1.28
HMGB1P13-201ENST00000406019 TMEM145Q8NBT3 493 aa7.07□□□□□ -1.28
HMGB1P13-201ENST00000406019 ST13P5Q8NFI4 369 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P13-201ENST00000406019 DNAJC7Q99615 494 aa7.07□□□□□ -1.28
HMGB1P13-201ENST00000406019 ARHGEF4Q9NR80 690 aa7.07□□□□□ -1.28
HMGB1P13-201ENST00000406019 SMG5Q9UPR3 1016 aaKnown RBP7.07□□□□□ -1.28
HMGB1P13-201ENST00000406019 IRS2Q9Y4H2 1338 aa7.06□□□□□ -1.28
HMGB1P13-201ENST00000406019 NUDT19A8MXV4 375 aa7.06□□□□□ -1.28
HMGB1P13-201ENST00000406019 ABLIM1O14639 778 aa7.06□□□□□ -1.28
HMGB1P13-201ENST00000406019 PDPK1O15530 556 aa7.06□□□□□ -1.28
HMGB1P13-201ENST00000406019 MAPKAPK2P49137 400 aa7.06□□□□□ -1.28
HMGB1P13-201ENST00000406019 SRSF3P84103 164 aaKnown RBP7.06□□□□□ -1.28
HMGB1P13-201ENST00000406019 RAB3GAP1Q15042 981 aa7.06□□□□□ -1.28
HMGB1P13-201ENST00000406019 PAQR3Q6TCH7 311 aa7.06□□□□□ -1.28
HMGB1P13-201ENST00000406019 JMYQ8N9B5 988 aa7.06□□□□□ -1.28
HMGB1P13-201ENST00000406019 PLEKHO2Q8TD55 490 aa7.06□□□□□ -1.28
HMGB1P13-201ENST00000406019 PPP1R14AQ96A00 147 aa7.06□□□□□ -1.28
HMGB1P13-201ENST00000406019 ZNF669Q96BR6 464 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P13-201ENST00000406019 SGSM3Q96HU1 749 aa7.06□□□□□ -1.28
HMGB1P13-201ENST00000406019 EPB41L4AQ9HCS5 686 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P13-201ENST00000406019 GULP1Q9UBP9 304 aa7.06□□□□□ -1.28
HMGB1P13-201ENST00000406019 RWDD3Q9Y3V2 267 aa7.06□□□□□ -1.28
HMGB1P13-201ENST00000406019 NPFFR2Q9Y5X5 522 aa7.06□□□□□ -1.28
HMGB1P13-201ENST00000406019 CCDC85CA6NKD9 419 aa7.05□□□□□ -1.28
HMGB1P13-201ENST00000406019 NFIBO00712 420 aa7.05□□□□□ -1.28
HMGB1P13-201ENST00000406019 TMEM253P0C7T8 217 aa7.05□□□□□ -1.28
HMGB1P13-201ENST00000406019 CFPP27918 469 aa7.05□□□□□ -1.28
HMGB1P13-201ENST00000406019 NR1I3Q14994 352 aa7.05□□□□□ -1.28
HMGB1P13-201ENST00000406019 PKN1Q16512 942 aa7.05□□□□□ -1.28
HMGB1P13-201ENST00000406019 RNF187Q5TA31 235 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P13-201ENST00000406019 E4F1Q66K89 784 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P13-201ENST00000406019 TMC6Q7Z403 805 aa7.05□□□□□ -1.28
HMGB1P13-201ENST00000406019 NLRP10Q86W26 655 aa7.05□□□□□ -1.28
HMGB1P13-201ENST00000406019 IGDCC3Q8IVU1 814 aa7.05□□□□□ -1.28
HMGB1P13-201ENST00000406019 KCNN1Q92952 543 aa7.05□□□□□ -1.28
HMGB1P13-201ENST00000406019 TMEM260Q9NX78 707 aa7.05□□□□□ -1.28
HMGB1P13-201ENST00000406019 FBXL7Q9UJT9 491 aa7.05□□□□□ -1.28
HMGB1P13-201ENST00000406019 PCDHA5Q9Y5H7 936 aa7.05□□□□□ -1.28
HMGB1P13-201ENST00000406019 CDC45O75419 566 aa7.04□□□□□ -1.28
HMGB1P13-201ENST00000406019 SNRPB2P08579 225 aaKnown RBP7.04□□□□□ -1.28
HMGB1P13-201ENST00000406019 IGFBP6P24592 240 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P13-201ENST00000406019 LINC00310P59036 64 aa7.04□□□□□ -1.28
HMGB1P13-201ENST00000406019 MAP4K2Q12851 820 aa7.04□□□□□ -1.28
HMGB1P13-201ENST00000406019 SSPNQ14714 243 aa7.04□□□□□ -1.28
HMGB1P13-201ENST00000406019 KCNA10Q16322 511 aa7.04□□□□□ -1.28
HMGB1P13-201ENST00000406019 KIAA0907Q7Z7F0 614 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P13-201ENST00000406019 LZTR1Q8N653 840 aa7.04□□□□□ -1.28
HMGB1P13-201ENST00000406019 CCDC140Q96MF4 163 aa7.04□□□□□ -1.28
HMGB1P13-201ENST00000406019 FANCLQ9NW38 375 aa7.04□□□□□ -1.28
HMGB1P13-201ENST00000406019 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.04□□□□□ -1.28
HMGB1P13-201ENST00000406019 ESYT3A0FGR9 886 aa7.03□□□□□ -1.28
HMGB1P13-201ENST00000406019 NPIPB6E9PJ23 425 aa7.03□□□□□ -1.28
HMGB1P13-201ENST00000406019 N4BP3O15049 544 aa7.03□□□□□ -1.28
HMGB1P13-201ENST00000406019 ADCY3O60266 1144 aa7.03□□□□□ -1.28
HMGB1P13-201ENST00000406019 DLX3O60479 287 aa7.03□□□□□ -1.28
HMGB1P13-201ENST00000406019 NPHS1O60500 1241 aa7.03□□□□□ -1.28
HMGB1P13-201ENST00000406019 CPP00450 1065 aa7.03□□□□□ -1.28
HMGB1P13-201ENST00000406019 IFRD2Q12894 506 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P13-201ENST00000406019 BICRALQ6AI39 1079 aa7.03□□□□□ -1.28
HMGB1P13-201ENST00000406019 SPOCD1Q6ZMY3 1216 aa7.03□□□□□ -1.28
HMGB1P13-201ENST00000406019 LDHDQ86WU2 507 aa7.03□□□□□ -1.28
HMGB1P13-201ENST00000406019 TMEFF1Q8IYR6 380 aa7.03□□□□□ -1.28
HMGB1P13-201ENST00000406019 ZCRB1Q8TBF4 217 aaKnown RBP7.03□□□□□ -1.28
HMGB1P13-201ENST00000406019 MZB1Q8WU39 189 aa7.03□□□□□ -1.28
HMGB1P13-201ENST00000406019 APPBP2Q92624 585 aa7.03□□□□□ -1.28
HMGB1P13-201ENST00000406019 OSBP2Q969R2 916 aa7.03□□□□□ -1.28
HMGB1P13-201ENST00000406019 TMX1Q9H3N1 280 aa7.03□□□□□ -1.28
HMGB1P13-201ENST00000406019 IFT57Q9NWB7 429 aa7.03□□□□□ -1.28
HMGB1P13-201ENST00000406019 LRP2BPQ9P2M1 347 aa7.03□□□□□ -1.28
HMGB1P13-201ENST00000406019 NOP58Q9Y2X3 529 aaKnown RBP7.03□□□□□ -1.28
HMGB1P13-201ENST00000406019 PRKAB1Q9Y478 270 aa7.03□□□□□ -1.28
HMGB1P13-201ENST00000406019 hCG_2014768A0A024R1R8 64 aa7.02□□□□□ -1.29
HMGB1P13-201ENST00000406019 ECI1P42126 302 aa7.02□□□□□ -1.29
HMGB1P13-201ENST00000406019 IGBP1P78318 339 aa7.02□□□□□ -1.29
HMGB1P13-201ENST00000406019 TMEM62Q0P6H9 643 aa7.02□□□□□ -1.29
HMGB1P13-201ENST00000406019 KCNAB2Q13303 367 aa7.02□□□□□ -1.29
HMGB1P13-201ENST00000406019 SQSTM1Q13501 440 aa7.02□□□□□ -1.29
HMGB1P13-201ENST00000406019 LCNL1Q6ZST4 164 aa7.02□□□□□ -1.29
HMGB1P13-201ENST00000406019 SPATC1Q76KD6 591 aa7.02□□□□□ -1.29
HMGB1P13-201ENST00000406019 NETO2Q8NC67 525 aa7.02□□□□□ -1.29
HMGB1P13-201ENST00000406019 RCBTB1Q8NDN9 531 aa7.02□□□□□ -1.29
HMGB1P13-201ENST00000406019 TSPAN17Q96FV3 270 aa7.02□□□□□ -1.29
HMGB1P13-201ENST00000406019 CDIP1Q9H305 208 aa7.02□□□□□ -1.29
HMGB1P13-201ENST00000406019 A0A1W2PQ27 194 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 A0A1W2PQ64 194 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 A0A1W2PQC6 194 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 A0A1W2PQD8 194 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 ZC3H12DA2A288 527 aaKnown RBP7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 TCAF2A6NFQ2 919 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 FGFR1P11362 822 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 LCP1P13796 627 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms