RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 AXIN2Q9Y2T1 843 aa15.39■□□□□ 0.05
DUSP28-202ENST00000405954 RNF225M0QZC1 329 aaPredicted RBP15.38■□□□□ 0.05
DUSP28-202ENST00000405954 ZNF189O75820 626 aaPredicted RBP15.38■□□□□ 0.05
DUSP28-202ENST00000405954 SLC5A9Q2M3M2 681 aa15.38■□□□□ 0.05
DUSP28-202ENST00000405954 ANKRD42Q8N9B4 389 aa15.38■□□□□ 0.05
DUSP28-202ENST00000405954 PPFIBP2Q8ND30 876 aa15.38■□□□□ 0.05
DUSP28-202ENST00000405954 ARHGEF2Q92974 986 aaKnown RBP15.38■□□□□ 0.05
DUSP28-202ENST00000405954 INTUQ9ULD6 942 aa15.38■□□□□ 0.05
DUSP28-202ENST00000405954 SLC12A7Q9Y666 1083 aa15.38■□□□□ 0.05
DUSP28-202ENST00000405954 SPDYE5A6NIY4 337 aa15.38■□□□□ 0.05
DUSP28-202ENST00000405954 GRM8O00222 908 aa15.38■□□□□ 0.05
DUSP28-202ENST00000405954 DHX9Q08211 1270 aaKnown RBP15.38■□□□□ 0.05
DUSP28-202ENST00000405954 ITGB3BPQ13352 177 aaPredicted RBP15.38■□□□□ 0.05
DUSP28-202ENST00000405954 RPS6KC1Q96S38 1066 aa15.38■□□□□ 0.05
DUSP28-202ENST00000405954 ETNK1Q9HBU6 452 aa15.38■□□□□ 0.05
DUSP28-202ENST00000405954 FAM208AQ9UK61 1670 aaKnown RBP15.38■□□□□ 0.05
DUSP28-202ENST00000405954 A8MUI8 341 aa15.38■□□□□ 0.05
DUSP28-202ENST00000405954 RGS16O15492 202 aaPredicted RBP15.38■□□□□ 0.05
DUSP28-202ENST00000405954 RNF8O76064 485 aa15.38■□□□□ 0.05
DUSP28-202ENST00000405954 LINGO3P0C6S8 592 aa15.38■□□□□ 0.05
DUSP28-202ENST00000405954 HSPD1P10809 573 aaKnown RBP15.38■□□□□ 0.05
DUSP28-202ENST00000405954 XBP1P17861 261 aa15.38■□□□□ 0.05
DUSP28-202ENST00000405954 SLCO1A2P46721 670 aa15.38■□□□□ 0.05
DUSP28-202ENST00000405954 GCLCP48506 637 aaPredicted RBP15.38■□□□□ 0.05
DUSP28-202ENST00000405954 BICDL1Q6ZP65 573 aa15.38■□□□□ 0.05
DUSP28-202ENST00000405954 UBE3BQ7Z3V4 1068 aa15.38■□□□□ 0.05
DUSP28-202ENST00000405954 DDX42Q86XP3 938 aaKnown RBP eCLIP15.38■□□□□ 0.05
DUSP28-202ENST00000405954 TEX9Q8N6V9 391 aa15.38■□□□□ 0.05
DUSP28-202ENST00000405954 SNRNP27Q8WVK2 155 aaKnown RBP15.38■□□□□ 0.05
DUSP28-202ENST00000405954 EPSTI1Q96J88 318 aa15.38■□□□□ 0.05
DUSP28-202ENST00000405954 EBF2Q9HAK2 575 aa15.38■□□□□ 0.05
DUSP28-202ENST00000405954 SUN1O94901 812 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 UBOX5O94941 541 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 HERVK_113P62684 666 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 BIRC3Q13489 604 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 ZMYM1Q5SVZ6 1142 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 RNF220Q5VTB9 566 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 CNBD1Q8NA66 436 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 CABLES1Q8TDN4 633 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 WASF1Q92558 559 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 CDK5RAP3Q96JB5 506 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 GGA2Q9UJY4 613 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 PHF8Q9UPP1 1060 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.37■□□□□ 0.05
DUSP28-202ENST00000405954 TRIM75PA6NK02 468 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 PAG1Q9NWQ8 432 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 DBF4Q9UBU7 674 aaPredicted RBP15.37■□□□□ 0.05
DUSP28-202ENST00000405954 HPSEQ9Y251 543 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 CAPN6Q9Y6Q1 641 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 KCNK3O14649 394 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 SETDB1Q15047 1291 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 CDC37Q16543 378 aaPredicted RBP15.37■□□□□ 0.05
DUSP28-202ENST00000405954 TCP11X2Q5H9J9 407 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 TMEM67Q5HYA8 995 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 HOOK3Q86VS8 718 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 NOSTRINQ8IVI9 506 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 XPO6Q96QU8 1125 aaKnown RBP15.37■□□□□ 0.05
DUSP28-202ENST00000405954 PLIN2Q99541 437 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 FBXL5Q9UKA1 691 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 PNMA2Q9UL42 364 aa15.37■□□□□ 0.05
DUSP28-202ENST00000405954 PXDNQ92626 1479 aa15.36■□□□□ 0.05
DUSP28-202ENST00000405954 RGPD1P0DJD0 1748 aa15.36■□□□□ 0.05
DUSP28-202ENST00000405954 MTMR3Q13615 1198 aa15.36■□□□□ 0.05
DUSP28-202ENST00000405954 RCN2Q14257 317 aa15.36■□□□□ 0.05
DUSP28-202ENST00000405954 RILPL1Q5EBL4 403 aa15.36■□□□□ 0.05
DUSP28-202ENST00000405954 XAGE3Q8WTP9 111 aa15.36■□□□□ 0.05
DUSP28-202ENST00000405954 RAB3IPQ96QF0 476 aaPredicted RBP15.36■□□□□ 0.05
DUSP28-202ENST00000405954 NUDCD1Q96RS6 583 aa15.36■□□□□ 0.05
DUSP28-202ENST00000405954 MLXIPLQ9NP71 852 aa15.36■□□□□ 0.05
DUSP28-202ENST00000405954 AGPAT5Q9NUQ2 364 aa15.36■□□□□ 0.05
DUSP28-202ENST00000405954 PACSIN2Q9UNF0 486 aaPredicted RBP15.36■□□□□ 0.05
DUSP28-202ENST00000405954 PSMA7O14818 248 aa15.36■□□□□ 0.05
DUSP28-202ENST00000405954 CD44P16070 742 aaKnown RBP15.36■□□□□ 0.05
DUSP28-202ENST00000405954 MSH2P43246 934 aa15.36■□□□□ 0.05
DUSP28-202ENST00000405954 COPS6Q7L5N1 327 aa15.36■□□□□ 0.05
DUSP28-202ENST00000405954 GALNT15Q8N3T1 639 aa15.36■□□□□ 0.05
DUSP28-202ENST00000405954 CAVIN3Q969G5 261 aa15.36■□□□□ 0.05
DUSP28-202ENST00000405954 DTNBP1Q96EV8 351 aa15.36■□□□□ 0.05
DUSP28-202ENST00000405954 NOC4LQ9BVI4 516 aaKnown RBP15.36■□□□□ 0.05
DUSP28-202ENST00000405954 GALNT8Q9NY28 637 aa15.36■□□□□ 0.05
DUSP28-202ENST00000405954 FMN2Q9NZ56 1722 aa15.36■□□□□ 0.05
DUSP28-202ENST00000405954 PIK3C2AO00443 1686 aa15.36■□□□□ 0.05
DUSP28-202ENST00000405954 IFIT3O14879 490 aaKnown RBP15.36■□□□□ 0.05
DUSP28-202ENST00000405954 NUGGCQ68CJ6 796 aa15.36■□□□□ 0.05
DUSP28-202ENST00000405954 CCDC25Q86WR0 208 aa15.36■□□□□ 0.05
DUSP28-202ENST00000405954 OPTNQ96CV9 577 aa15.36■□□□□ 0.05
DUSP28-202ENST00000405954 TUBGCP6Q96RT7 1819 aa15.35■□□□□ 0.05
DUSP28-202ENST00000405954 FMNL1O95466 1100 aaPredicted RBP15.35■□□□□ 0.05
DUSP28-202ENST00000405954 IGKV5-2P06315 115 aa15.35■□□□□ 0.05
DUSP28-202ENST00000405954 LRRC14Q15048 493 aa15.35■□□□□ 0.05
DUSP28-202ENST00000405954 C6orf89Q6UWU4 347 aa15.35■□□□□ 0.05
DUSP28-202ENST00000405954 CREG2Q8IUH2 290 aa15.35■□□□□ 0.05
DUSP28-202ENST00000405954 IQCKQ8N0W5 287 aa15.35■□□□□ 0.05
DUSP28-202ENST00000405954 CMTR1Q8N1G2 835 aaKnown RBP15.35■□□□□ 0.05
DUSP28-202ENST00000405954 CSGALNACT2Q8N6G5 542 aa15.35■□□□□ 0.05
DUSP28-202ENST00000405954 KBTBD3Q8NAB2 608 aa15.35■□□□□ 0.05
DUSP28-202ENST00000405954 TMBIM4Q9HC24 238 aa15.35■□□□□ 0.05
DUSP28-202ENST00000405954 CHN1P15882 459 aa15.35■□□□□ 0.05
DUSP28-202ENST00000405954 HSD17B3P37058 310 aa15.35■□□□□ 0.05
DUSP28-202ENST00000405954 ZNF174Q15697 407 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms