RNA–Protein interactions for RNA: ENST00000405262.6

TNFSF11-204, Transcript of TNF superfamily member 11, humanhuman

TSL 5 BASIC

Gene TNFSF11, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-204ENST00000405262 YIPF3Q9GZM5 350 aa10.79□□□□□ -0.68
TNFSF11-204ENST00000405262 CNOT10Q9H9A5 744 aaKnown RBP10.79□□□□□ -0.68
TNFSF11-204ENST00000405262 STK36Q9NRP7 1315 aa10.79□□□□□ -0.68
TNFSF11-204ENST00000405262 TTC26A0AVF1 554 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 RASSF10A6NK89 507 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 ERVV-2B6SEH9 535 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 CNGA1P29973 690 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 CCT6AP40227 531 aaKnown RBP10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 PPP2R2AP63151 447 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 WDR59Q6PJI9 974 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 MAATS1Q7Z4T9 603 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 SPATA21Q7Z572 469 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 CCDC197Q8NCU1 140 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 SMCR8Q8TEV9 937 aaPredicted RBP10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 IQCDQ96DY2 449 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 BICD1Q96G01 975 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 KCNMB3Q9NPA1 279 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 CWC25Q9NXE8 425 aaPredicted RBP10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 TBC1D2BQ9UPU7 963 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 MAP3K2Q9Y2U5 619 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 EIF2S2P20042 333 aaKnown RBP10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 ATP4AP20648 1035 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 DRD4P21917 467 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 RBM5P52756 815 aaKnown RBP eCLIP10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 STX17P56962 302 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 MTA1Q13330 715 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 SNX1Q13596 522 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 QPCTQ16769 361 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 KLHL10Q6JEL2 608 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 TRIM74Q86UV6 250 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 TRIM73Q86UV7 250 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 NOSTRINQ8IVI9 506 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 FLAD1Q8NFF5 587 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 WASF1Q92558 559 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 GJB4Q9NTQ9 266 aa10.78□□□□□ -0.68
TNFSF11-204ENST00000405262 LGALS16A8MUM7 142 aa10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 KCNJ18B7U540 433 aa10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 ASAP2O43150 1006 aa10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 A1BGP04217 495 aa10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 CDC25AP30304 524 aa10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 KIF5BP33176 963 aa10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 MRPS35P82673 323 aaKnown RBP10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 SLC7A5Q01650 507 aa10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 UBXN1Q04323 297 aa10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 DPYDQ12882 1025 aa10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 KCNJ12Q14500 433 aa10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 LBRQ14739 615 aaKnown RBP10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 SGSM1Q2NKQ1 1148 aa10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 C1orf141Q5JVX7 400 aa10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 CHST3Q7LGC8 479 aa10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 ARHGAP22Q7Z5H3 698 aa10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 CPLX4Q7Z7G2 160 aa10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 NCOA7Q8NI08 942 aa10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 AGAP11Q8TF27 550 aa10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 RAPGEF5Q92565 580 aa10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 LRRC45Q96CN5 670 aa10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 LACRTQ9GZZ8 138 aa10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 AATFQ9NY61 560 aaKnown RBP eCLIP10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 PLAAQ9Y263 795 aa10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 CHD4Q14839 1912 aa10.77□□□□□ -0.69
TNFSF11-204ENST00000405262 ZNF831Q5JPB2 1677 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 GRID2IPA4D2P6 1211 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 SPDYE3A6NKU9 549 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 GNPATO15228 680 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 WFS1O76024 890 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 HMGB2P26583 209 aaKnown RBP10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 CABP4P57796 275 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 DYNC1I2Q13409 638 aaKnown RBP10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 SAFBQ15424 915 aaKnown RBP eCLIP10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 CFAP221Q4G0U5 840 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 MB21D1Q8N884 522 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 B4GALNT2Q8NHY0 566 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 FAM81AQ8TBF8 368 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 VPS16Q9H269 839 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 SEC31BQ9NQW1 1179 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 NFU1Q9UMS0 254 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 COL5A3P25940 1745 aaPredicted RBP10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 SCN11AQ9UI33 1791 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 ECM29Q5VYK3 1845 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 LRRD1A4D1F6 860 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 H7C1D1 291 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 DIAPH2O60879 1101 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 FLOT1O75955 427 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 GNAT1P11488 350 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 EEF1GP26641 437 aaKnown RBP10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 CARSP49589 748 aaKnown RBP10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 CTCFP49711 727 aaPredicted RBP10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 PAK1Q13153 545 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 MTMR3Q13615 1198 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 GPR162Q16538 588 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 DDX46Q7L014 1031 aaKnown RBP10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 ANKRD23Q86SG2 305 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 GRAMD1CQ8IYS0 662 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 CHMP6Q96FZ7 201 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 PAGE5Q96GU1 130 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 PYM1Q9BRP8 204 aaKnown RBP10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 FOXP1Q9H334 677 aaPredicted RBP10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 SH2D4AQ9H788 454 aa10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 SUDS3Q9H7L9 328 aaPredicted RBP10.76□□□□□ -0.69
TNFSF11-204ENST00000405262 NHEJ1Q9H9Q4 299 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms