RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 RBM43Q6ZSC3 357 aaKnown RBP23.83■■□□□ 1.41
TPM1-208ENST00000404484 CD99L2Q8TCZ2 262 aa23.83■■□□□ 1.41
TPM1-208ENST00000404484 CTDP1Q9Y5B0 961 aaPredicted RBP23.83■■□□□ 1.41
TPM1-208ENST00000404484 PIK3CDO00329 1044 aa23.82■■□□□ 1.4
TPM1-208ENST00000404484 NEMFO60524 1076 aa23.82■■□□□ 1.4
TPM1-208ENST00000404484 CCNT1O60563 726 aaKnown RBP23.82■■□□□ 1.4
TPM1-208ENST00000404484 GCFC2P16383 781 aaKnown RBP23.82■■□□□ 1.4
TPM1-208ENST00000404484 TSPY26PQ9H489 355 aa23.82■■□□□ 1.4
TPM1-208ENST00000404484 ZBED4O75132 1171 aa23.82■■□□□ 1.4
TPM1-208ENST00000404484 ZNF202O95125 648 aa23.82■■□□□ 1.4
TPM1-208ENST00000404484 SAMD1Q6SPF0 538 aaPredicted RBP23.82■■□□□ 1.4
TPM1-208ENST00000404484 C4orf32Q8N8J7 132 aa23.82■■□□□ 1.4
TPM1-208ENST00000404484 ERO1AQ96HE7 468 aa23.82■■□□□ 1.4
TPM1-208ENST00000404484 CSRNP2Q9H175 543 aa23.82■■□□□ 1.4
TPM1-208ENST00000404484 SLC38A10Q9HBR0 1119 aa23.82■■□□□ 1.4
TPM1-208ENST00000404484 KCNH3Q9ULD8 1083 aa23.82■■□□□ 1.4
TPM1-208ENST00000404484 SPDYE3A6NKU9 549 aa23.81■■□□□ 1.4
TPM1-208ENST00000404484 MEIS2O14770 477 aa23.81■■□□□ 1.4
TPM1-208ENST00000404484 LONP1P36776 959 aaKnown RBP23.81■■□□□ 1.4
TPM1-208ENST00000404484 CAMK4Q16566 473 aa23.81■■□□□ 1.4
TPM1-208ENST00000404484 PPP4R3AQ6IN85 833 aa23.81■■□□□ 1.4
TPM1-208ENST00000404484 SDF4Q9BRK5 362 aa23.81■■□□□ 1.4
TPM1-208ENST00000404484 PYM1Q9BRP8 204 aaKnown RBP23.81■■□□□ 1.4
TPM1-208ENST00000404484 ANO3Q9BYT9 981 aa23.81■■□□□ 1.4
TPM1-208ENST00000404484 CCPG1Q9ULG6 757 aa23.81■■□□□ 1.4
TPM1-208ENST00000404484 VWA3AA6NCI4 1184 aa23.8■■□□□ 1.4
TPM1-208ENST00000404484 USP17L15C9J2P7 530 aa23.8■■□□□ 1.4
TPM1-208ENST00000404484 USP17L13C9JLJ4 530 aa23.8■■□□□ 1.4
TPM1-208ENST00000404484 USP17L11C9JVI0 530 aa23.8■■□□□ 1.4
TPM1-208ENST00000404484 USP17L18D6R9N7 530 aa23.8■■□□□ 1.4
TPM1-208ENST00000404484 USP17L22D6RA61 530 aa23.8■■□□□ 1.4
TPM1-208ENST00000404484 USP17L17D6RBQ6 530 aa23.8■■□□□ 1.4
TPM1-208ENST00000404484 USP17L19D6RCP7 530 aa23.8■■□□□ 1.4
TPM1-208ENST00000404484 USP17L20D6RJB6 530 aa23.8■■□□□ 1.4
TPM1-208ENST00000404484 USP17L24Q0WX57 530 aa23.8■■□□□ 1.4
TPM1-208ENST00000404484 USP17L6PQ6QN14 398 aa23.8■■□□□ 1.4
TPM1-208ENST00000404484 DTHD1Q6ZMT9 781 aa23.8■■□□□ 1.4
TPM1-208ENST00000404484 ASCC2Q9H1I8 757 aaPredicted RBP23.8■■□□□ 1.4
TPM1-208ENST00000404484 MRVI1Q9Y6F6 885 aa23.8■■□□□ 1.4
TPM1-208ENST00000404484 MYPNQ86TC9 1320 aa23.8■■□□□ 1.4
TPM1-208ENST00000404484 OR52Z1P0C646 297 aa23.79■■□□□ 1.4
TPM1-208ENST00000404484 CCDC192P0DO97 292 aa23.79■■□□□ 1.4
TPM1-208ENST00000404484 BCRP11274 1271 aa23.79■■□□□ 1.4
TPM1-208ENST00000404484 HOXA7P31268 230 aaPredicted RBP23.79■■□□□ 1.4
TPM1-208ENST00000404484 MRE11P49959 708 aa23.79■■□□□ 1.4
TPM1-208ENST00000404484 USP11P51784 963 aa23.79■■□□□ 1.4
TPM1-208ENST00000404484 GRIN1Q05586 938 aa23.79■■□□□ 1.4
TPM1-208ENST00000404484 PABPC4Q13310 644 aaKnown RBP eCLIP23.79■■□□□ 1.41e-6■□□□□ 11.2
TPM1-208ENST00000404484 CCDC34Q96HJ3 373 aa23.79■■□□□ 1.4
TPM1-208ENST00000404484 EHMT1Q9H9B1 1298 aa23.79■■□□□ 1.4
TPM1-208ENST00000404484 TRIM17Q9Y577 477 aa23.79■■□□□ 1.4
TPM1-208ENST00000404484 GCOM1H8Y6P7 765 aaPredicted RBP23.78■■□□□ 1.4
TPM1-208ENST00000404484 POLR2MP0CAP2 368 aa23.78■■□□□ 1.4
TPM1-208ENST00000404484 TXLNAP40222 546 aa23.78■■□□□ 1.4
TPM1-208ENST00000404484 LACTBP83111 547 aaPredicted RBP23.78■■□□□ 1.4
TPM1-208ENST00000404484 MOXD1Q6UVY6 613 aa23.78■■□□□ 1.4
TPM1-208ENST00000404484 OTOP1Q7RTM1 612 aa23.78■■□□□ 1.4
TPM1-208ENST00000404484 GAS2L3Q86XJ1 694 aa23.78■■□□□ 1.4
TPM1-208ENST00000404484 SMCR8Q8TEV9 937 aaPredicted RBP23.78■■□□□ 1.4
TPM1-208ENST00000404484 ABHD8Q96I13 439 aa23.78■■□□□ 1.4
TPM1-208ENST00000404484 ARHGAP39Q9C0H5 1083 aa23.78■■□□□ 1.4
TPM1-208ENST00000404484 HOOK1Q9UJC3 728 aaKnown RBP23.78■■□□□ 1.4
TPM1-208ENST00000404484 PNMA3Q9UL41 463 aa23.78■■□□□ 1.4
TPM1-208ENST00000404484 OPLAHO14841 1288 aa23.78■■□□□ 1.4
TPM1-208ENST00000404484 OSBPP22059 807 aa23.78■■□□□ 1.4
TPM1-208ENST00000404484 COG2Q14746 738 aa23.78■■□□□ 1.4
TPM1-208ENST00000404484 MCF2L2Q86YR7 1114 aa23.78■■□□□ 1.4
TPM1-208ENST00000404484 SAMD3Q8N6K7 520 aa23.78■■□□□ 1.4
TPM1-208ENST00000404484 ZNF536O15090 1300 aa23.77■■□□□ 1.4
TPM1-208ENST00000404484 LOC285556D6RIA3 1793 aa23.77■■□□□ 1.4
TPM1-208ENST00000404484 OAZ1P54368 228 aa23.77■■□□□ 1.4
TPM1-208ENST00000404484 PKN2Q16513 984 aaKnown RBP23.77■■□□□ 1.4
TPM1-208ENST00000404484 CATSPERGQ6ZRH7 1159 aa23.77■■□□□ 1.4
TPM1-208ENST00000404484 ELOA2Q8IYF1 753 aaPredicted RBP23.77■■□□□ 1.4
TPM1-208ENST00000404484 AK8Q96MA6 479 aa23.77■■□□□ 1.4
TPM1-208ENST00000404484 P2RX7Q99572 595 aaKnown RBP23.77■■□□□ 1.4
TPM1-208ENST00000404484 TMEM60Q9H2L4 133 aa23.77■■□□□ 1.4
TPM1-208ENST00000404484 EFCC1Q9HA90 598 aa23.77■■□□□ 1.4
TPM1-208ENST00000404484 USP25Q9UHP3 1055 aa23.77■■□□□ 1.4
TPM1-208ENST00000404484 VWA5AO00534 786 aa23.76■■□□□ 1.39
TPM1-208ENST00000404484 ECM2O94769 699 aaPredicted RBP23.76■■□□□ 1.39
TPM1-208ENST00000404484 CTGFP29279 349 aa23.76■■□□□ 1.39
TPM1-208ENST00000404484 DSG3P32926 999 aa23.76■■□□□ 1.39
TPM1-208ENST00000404484 SREBF1P36956 1147 aa23.76■■□□□ 1.39
TPM1-208ENST00000404484 CALCRLQ16602 461 aa23.76■■□□□ 1.39
TPM1-208ENST00000404484 SPECC1Q5M775 1068 aa23.76■■□□□ 1.39
TPM1-208ENST00000404484 KANK3Q6NY19 840 aa23.76■■□□□ 1.39
TPM1-208ENST00000404484 SASS6Q6UVJ0 657 aa23.76■■□□□ 1.39
TPM1-208ENST00000404484 SYMPKQ92797 1274 aaKnown RBP23.76■■□□□ 1.39
TPM1-208ENST00000404484 GRPEL1Q9HAV7 217 aa23.76■■□□□ 1.39
TPM1-208ENST00000404484 HOXC10Q9NYD6 342 aa23.76■■□□□ 1.39
TPM1-208ENST00000404484 PARP14Q460N5 1801 aa23.76■■□□□ 1.39
TPM1-208ENST00000404484 HTTP42858 3142 aa23.76■■□□□ 1.39
TPM1-208ENST00000404484 CFBP00751 764 aa23.75■■□□□ 1.39
TPM1-208ENST00000404484 DEKP35659 375 aaKnown RBP23.75■■□□□ 1.39
TPM1-208ENST00000404484 IRX3P78415 501 aaPredicted RBP23.75■■□□□ 1.39
TPM1-208ENST00000404484 CKAP2LQ8IYA6 745 aa23.75■■□□□ 1.39
TPM1-208ENST00000404484 ANKRD13CQ8N6S4 541 aa23.75■■□□□ 1.39
TPM1-208ENST00000404484 FUCA2Q9BTY2 467 aa23.75■■□□□ 1.39
TPM1-208ENST00000404484 MAP3K20Q9NYL2 800 aaKnown RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 217.1 ms