RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 ASTN1O14525 1302 aa38.07■■■■□ 3.68
CSNK1E-204ENST00000403904 PRKCZQ05513 592 aa38.06■■■■□ 3.68
CSNK1E-204ENST00000403904 FGD4Q96M96 766 aa38.06■■■■□ 3.68
CSNK1E-204ENST00000403904 CYP2B6P20813 491 aa38.06■■■■□ 3.68
CSNK1E-204ENST00000403904 EARS2Q5JPH6 523 aaKnown RBP38.06■■■■□ 3.68
CSNK1E-204ENST00000403904 NPLOC4Q8TAT6 608 aa38.06■■■■□ 3.68
CSNK1E-204ENST00000403904 DDIT3P35638 169 aa38.05■■■■□ 3.68
CSNK1E-204ENST00000403904 RGS2P41220 211 aa38.05■■■■□ 3.68
CSNK1E-204ENST00000403904 CTCFP49711 727 aaPredicted RBP38.05■■■■□ 3.68
CSNK1E-204ENST00000403904 FLT3LGP49771 235 aa38.05■■■■□ 3.68
CSNK1E-204ENST00000403904 UBXN2AP68543 259 aa38.05■■■■□ 3.68
CSNK1E-204ENST00000403904 ARHGEF6Q15052 776 aa38.05■■■■□ 3.68
CSNK1E-204ENST00000403904 MCTP2Q6DN12 878 aa38.05■■■■□ 3.68
CSNK1E-204ENST00000403904 FERMT3Q86UX7 667 aa38.05■■■■□ 3.68
CSNK1E-204ENST00000403904 PXMP2Q9NR77 195 aa38.05■■■■□ 3.68
CSNK1E-204ENST00000403904 EIF2AK2P19525 551 aaKnown RBP38.04■■■■□ 3.68
CSNK1E-204ENST00000403904 U2AF2P26368 475 aaKnown RBP eCLIP38.04■■■■□ 3.683e-11■■□□□ 12.7
CSNK1E-204ENST00000403904 HOXD10P28358 340 aa38.04■■■■□ 3.68
CSNK1E-204ENST00000403904 LBX1P52954 281 aa38.04■■■■□ 3.68
CSNK1E-204ENST00000403904 ARHGEF16Q5VV41 709 aa38.04■■■■□ 3.68
CSNK1E-204ENST00000403904 PIK3AP1Q6ZUJ8 805 aa38.04■■■■□ 3.68
CSNK1E-204ENST00000403904 DNERQ8NFT8 737 aa38.04■■■■□ 3.68
CSNK1E-204ENST00000403904 NSUN6Q8TEA1 469 aaKnown RBP38.04■■■■□ 3.68
CSNK1E-204ENST00000403904 SLC5A4Q9NY91 659 aa38.04■■■■□ 3.68
CSNK1E-204ENST00000403904 ADD3Q9UEY8 706 aaKnown RBP38.04■■■■□ 3.68
CSNK1E-204ENST00000403904 SRRDQ9UH36 339 aa38.04■■■■□ 3.68
CSNK1E-204ENST00000403904 CCDC194A0A1B0GVG4 234 aa38.03■■■■□ 3.68
CSNK1E-204ENST00000403904 FAM205CA6NFA0 338 aa38.03■■■■□ 3.68
CSNK1E-204ENST00000403904 GNRH1P01148 92 aa38.03■■■■□ 3.68
CSNK1E-204ENST00000403904 KRT25Q7Z3Z0 450 aa38.03■■■■□ 3.68
CSNK1E-204ENST00000403904 DDX49Q9Y6V7 483 aaKnown RBP38.03■■■■□ 3.68
CSNK1E-204ENST00000403904 HOXC6P09630 235 aa38.02■■■■□ 3.68
CSNK1E-204ENST00000403904 PDIA4P13667 645 aaKnown RBP38.02■■■■□ 3.68
CSNK1E-204ENST00000403904 ALDH5A1P51649 535 aaPredicted RBP38.02■■■■□ 3.68
CSNK1E-204ENST00000403904 FOXD4L5Q5VV16 416 aaPredicted RBP38.02■■■■□ 3.68
CSNK1E-204ENST00000403904 NOSTRINQ8IVI9 506 aa38.02■■■■□ 3.68
CSNK1E-204ENST00000403904 FOXD4L4Q8WXT5 416 aaPredicted RBP38.02■■■■□ 3.68
CSNK1E-204ENST00000403904 MYH7BA7E2Y1 1941 aa38.02■■■■□ 3.68
CSNK1E-204ENST00000403904 MAML3Q96JK9 1138 aa38.02■■■■□ 3.68
CSNK1E-204ENST00000403904 DIS3Q9Y2L1 958 aaKnown RBP38.02■■■■□ 3.68
CSNK1E-204ENST00000403904 RPTORQ8N122 1335 aa38.01■■■■□ 3.68
CSNK1E-204ENST00000403904 NONOQ15233 471 aaKnown RBP eCLIP38.01■■■■□ 3.67
CSNK1E-204ENST00000403904 APBA2Q99767 749 aa38.01■■■■□ 3.67
CSNK1E-204ENST00000403904 PDCD2LQ9BRP1 358 aa38.01■■■■□ 3.67
CSNK1E-204ENST00000403904 TRIM17Q9Y577 477 aa38.01■■■■□ 3.67
CSNK1E-204ENST00000403904 OTOP1Q7RTM1 612 aa38■■■■□ 3.67
CSNK1E-204ENST00000403904 IL31RAQ8NI17 732 aa38■■■■□ 3.67
CSNK1E-204ENST00000403904 TBCKQ8TEA7 893 aa38■■■■□ 3.67
CSNK1E-204ENST00000403904 EHMT1Q9H9B1 1298 aa38■■■■□ 3.67
CSNK1E-204ENST00000403904 CENPFP49454 3210 aa38■■■■□ 3.67
CSNK1E-204ENST00000403904 FRMPD4Q14CM0 1322 aa38■■■■□ 3.67
CSNK1E-204ENST00000403904 HTTP42858 3142 aa37.99■■■■□ 3.67
CSNK1E-204ENST00000403904 ZSCAN22P10073 491 aaPredicted RBP37.99■■■■□ 3.67
CSNK1E-204ENST00000403904 PGM5Q15124 567 aa37.99■■■■□ 3.67
CSNK1E-204ENST00000403904 INF2Q27J81 1249 aa37.99■■■■□ 3.67
CSNK1E-204ENST00000403904 MCM3APO60318 1980 aa37.99■■■■□ 3.67
CSNK1E-204ENST00000403904 SREBF1P36956 1147 aa37.98■■■■□ 3.67
CSNK1E-204ENST00000403904 CCL14Q16627 93 aa37.98■■■■□ 3.67
CSNK1E-204ENST00000403904 ZNF467Q7Z7K2 595 aaPredicted RBP37.97■■■■□ 3.67
CSNK1E-204ENST00000403904 FLRT1Q9NZU1 646 aa37.97■■■■□ 3.67
CSNK1E-204ENST00000403904 ZDHHC9Q9Y397 364 aa37.97■■■■□ 3.67
CSNK1E-204ENST00000403904 NR3C2P08235 984 aa37.97■■■■□ 3.67
CSNK1E-204ENST00000403904 XRCC5P13010 732 aaKnown RBP37.97■■■■□ 3.67
CSNK1E-204ENST00000403904 ARHGAP4P98171 946 aa37.97■■■■□ 3.67
CSNK1E-204ENST00000403904 RESTQ13127 1097 aa37.97■■■■□ 3.67
CSNK1E-204ENST00000403904 IWS1Q96ST2 819 aa37.97■■■■□ 3.67
CSNK1E-204ENST00000403904 BRD1O95696 1058 aa37.96■■■■□ 3.67
CSNK1E-204ENST00000403904 MYCLP12524 364 aaPredicted RBP37.96■■■■□ 3.67
CSNK1E-204ENST00000403904 CRYGNQ8WXF5 182 aa37.96■■■■□ 3.67
CSNK1E-204ENST00000403904 ZFP91Q96JP5 570 aaPredicted RBP37.96■■■■□ 3.67
CSNK1E-204ENST00000403904 ASB14A6NK59 587 aa37.94■■■■□ 3.66
CSNK1E-204ENST00000403904 EDNRBP24530 442 aa37.94■■■■□ 3.66
CSNK1E-204ENST00000403904 EDIL3O43854 480 aa37.93■■■■□ 3.66
CSNK1E-204ENST00000403904 F13A1P00488 732 aa37.93■■■■□ 3.66
CSNK1E-204ENST00000403904 IRF5Q13568 498 aa37.93■■■■□ 3.66
CSNK1E-204ENST00000403904 PCNX4Q63HM2 1172 aa37.93■■■■□ 3.66
CSNK1E-204ENST00000403904 MAMDC4Q6UXC1 1216 aa37.93■■■■□ 3.66
CSNK1E-204ENST00000403904 ARMCX2Q7L311 632 aa37.93■■■■□ 3.66
CSNK1E-204ENST00000403904 VSIG10LQ86VR7 867 aa37.93■■■■□ 3.66
CSNK1E-204ENST00000403904 RAET1EQ8TD07 263 aa37.93■■■■□ 3.66
CSNK1E-204ENST00000403904 MPHOSPH6Q99547 160 aaKnown RBP37.93■■■■□ 3.66
CSNK1E-204ENST00000403904 TINF2Q9BSI4 451 aa37.93■■■■□ 3.66
CSNK1E-204ENST00000403904 PRMT2P55345 433 aa37.93■■■■□ 3.66
CSNK1E-204ENST00000403904 PDE4DQ08499 809 aa37.93■■■■□ 3.66
CSNK1E-204ENST00000403904 BRAPQ7Z569 592 aa37.93■■■■□ 3.66
CSNK1E-204ENST00000403904 ZSCAN16Q9H4T2 348 aaPredicted RBP37.93■■■■□ 3.66
CSNK1E-204ENST00000403904 LOC102724159A0A0B4J2E5 919 aa37.92■■■■□ 3.66
CSNK1E-204ENST00000403904 B4DLN1 442 aa37.92■■■■□ 3.66
CSNK1E-204ENST00000403904 CCND2P30279 289 aa37.92■■■■□ 3.66
CSNK1E-204ENST00000403904 NUCB2P80303 420 aa37.92■■■■□ 3.66
CSNK1E-204ENST00000403904 MRPS9P82933 396 aaKnown RBP37.92■■■■□ 3.66
CSNK1E-204ENST00000403904 PWP2Q15269 919 aaKnown RBP37.92■■■■□ 3.66
CSNK1E-204ENST00000403904 NEK8Q86SG6 692 aa37.92■■■■□ 3.66
CSNK1E-204ENST00000403904 LRRC37A2A6NM11 1700 aa37.91■■■■□ 3.66
CSNK1E-204ENST00000403904 ATP2B1P20020 1258 aa37.91■■■■□ 3.66
CSNK1E-204ENST00000403904 STXBP2Q15833 593 aa37.91■■■■□ 3.66
CSNK1E-204ENST00000403904 OLFML2BQ68BL8 750 aa37.91■■■■□ 3.66
CSNK1E-204ENST00000403904 MORC4Q8TE76 937 aa37.91■■■■□ 3.66
CSNK1E-204ENST00000403904 CYP3A4P08684 503 aa37.9■■■■□ 3.66
CSNK1E-204ENST00000403904 USP11P51784 963 aa37.9■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms