RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 KANSL2Q9H9L4 492 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 NHEJ1Q9H9Q4 299 aaPredicted RBP8.55□□□□□ -1.04
HDAC9-201ENST00000401921 POLD4Q9HCU8 107 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 ABCB6Q9NP58 842 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 SERPINB13Q9UIV8 391 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 CHD4Q14839 1912 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 RHOBTB3O94955 611 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 SLC1A4P43007 532 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 EP400NLQ6ZTU2 488 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 SMCR8Q8TEV9 937 aaPredicted RBP8.55□□□□□ -1.04
HDAC9-201ENST00000401921 ZMYND12Q9H0C1 365 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 PSTPIP2Q9H939 334 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 DDX25Q9UHL0 483 aaKnown RBP8.55□□□□□ -1.04
HDAC9-201ENST00000401921 DOT1LQ8TEK3 1739 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 CCDC151A5D8V7 595 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 TACC1O75410 805 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 TRIM37O94972 964 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 RNASE9P60153 205 aaKnown RBP8.55□□□□□ -1.04
HDAC9-201ENST00000401921 PPP4CP60510 307 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 BRD3Q15059 726 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 VPS72Q15906 364 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 WHAMMP3Q1A5X7 153 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 C16orf86Q6ZW13 317 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 C4orf32Q8N8J7 132 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 GIMAP8Q8ND71 665 aaPredicted RBP8.55□□□□□ -1.04
HDAC9-201ENST00000401921 EHBP1Q8NDI1 1231 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 TBC1D16Q8TBP0 767 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 SPZ1Q9BXG8 430 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 IFIH1Q9BYX4 1025 aaKnown RBP8.55□□□□□ -1.04
HDAC9-201ENST00000401921 DBNDD1Q9H9R9 158 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 POLLQ9UGP5 575 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 USP17L15C9J2P7 530 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 USP17L13C9JLJ4 530 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 USP17L11C9JVI0 530 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 USP17L18D6R9N7 530 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 USP17L22D6RA61 530 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 USP17L17D6RBQ6 530 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 USP17L19D6RCP7 530 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 USP17L20D6RJB6 530 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 BBOX1O75936 387 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 CXCR5P32302 372 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 MAGEA1P43355 309 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 USP17L24Q0WX57 530 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 KCNB1Q14721 858 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 USP17L6PQ6QN14 398 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 LEKR1Q6ZMV7 388 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 DDX12PQ92771 950 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 CUL5Q93034 780 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 CUEDC2Q9H467 287 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 KBTBD4Q9NVX7 518 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 KIAA1024Q9UPX6 916 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 DAGLAQ9Y4D2 1042 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 ITIH6Q6UXX5 1313 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 GPR75-ASB3A0A0A6YYF3 556 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 USP17L10C9JJH3 530 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 BUB1O43683 1085 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 TBC1D8O95759 1140 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 ATP1A1P05023 1023 aaKnown RBP8.54□□□□□ -1.04
HDAC9-201ENST00000401921 PDHBP11177 359 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 PAPPAQ13219 1627 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 SLC35G1Q2M3R5 365 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 C10orf67Q8IYJ2 551 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 NOA1Q8NC60 698 aaKnown RBP8.54□□□□□ -1.04
HDAC9-201ENST00000401921 DUSP10Q9Y6W6 482 aa8.54□□□□□ -1.04
HDAC9-201ENST00000401921 COL14A1Q05707 1796 aaKnown RBP8.53□□□□□ -1.04
HDAC9-201ENST00000401921 SHANK3Q9BYB0 1731 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 MYMKA6NI61 221 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 SLC37A4O43826 429 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 SASH3O75995 380 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 TTLL1O95922 423 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 MYL1P05976 194 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 PBX1P40424 430 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 PAFAH1B1P43034 410 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 VSNL1P62760 191 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 ZBED6P86452 979 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 TUBB2AQ13885 445 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 MSL1Q68DK7 614 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 TTI2Q6NXR4 508 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 TMED8Q6PL24 325 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-201ENST00000401921 IRF2BP1Q8IU81 584 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 ALS2CR12Q96Q35 445 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 RUFY1Q96T51 708 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 TUBB2BQ9BVA1 445 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 NDST4Q9H3R1 872 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 MTMR4Q9NYA4 1195 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 CAPN11Q9UMQ6 739 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 XIRP1Q702N8 1843 aaKnown RBP8.53□□□□□ -1.04
HDAC9-201ENST00000401921 LRRC10BA6NIK2 292 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 PPEF1O14829 653 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-201ENST00000401921 PLEKP08567 350 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-201ENST00000401921 PRPHP41219 470 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 CKAP4Q07065 602 aaKnown RBP8.53□□□□□ -1.04
HDAC9-201ENST00000401921 RAPGEF1Q13905 1077 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 PTPROQ16827 1216 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 MAP9Q49MG5 647 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 ASPRV1Q53RT3 343 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 SEPT12Q8IYM1 358 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 ADGRF4Q8IZF3 695 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 MYOCDQ8IZQ8 938 aa8.53□□□□□ -1.04
HDAC9-201ENST00000401921 PNKPQ96T60 521 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms