RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 MAP3K9P80192 1104 aa28.93■■■□□ 2.22
CPNE1-205ENST00000401607 PLCB2Q00722 1185 aa28.93■■■□□ 2.22
CPNE1-205ENST00000401607 VGLL4Q14135 290 aa28.93■■■□□ 2.22
CPNE1-205ENST00000401607 FCHSD1Q86WN1 690 aa28.93■■■□□ 2.22
CPNE1-205ENST00000401607 TRIML1Q8N9V2 468 aa28.93■■■□□ 2.22
CPNE1-205ENST00000401607 ZC3H15Q8WU90 426 aaKnown RBP28.93■■■□□ 2.22
CPNE1-205ENST00000401607 TTC12Q9H892 705 aaPredicted RBP28.93■■■□□ 2.22
CPNE1-205ENST00000401607 SRCAPQ6ZRS2 3230 aa28.92■■■□□ 2.22
CPNE1-205ENST00000401607 WDR90Q96KV7 1748 aa28.92■■■□□ 2.22
CPNE1-205ENST00000401607 GOLGA6L19H0YKK7 550 aa28.92■■■□□ 2.22
CPNE1-205ENST00000401607 GRIN3BO60391 1043 aa28.92■■■□□ 2.22
CPNE1-205ENST00000401607 SMC2O95347 1197 aa28.92■■■□□ 2.22
CPNE1-205ENST00000401607 PDIA5Q14554 519 aa28.92■■■□□ 2.22
CPNE1-205ENST00000401607 RASSF8Q8NHQ8 419 aa28.92■■■□□ 2.22
CPNE1-205ENST00000401607 LRWD1Q9UFC0 647 aa28.92■■■□□ 2.22
CPNE1-205ENST00000401607 RLFQ13129 1914 aa28.91■■■□□ 2.22
CPNE1-205ENST00000401607 BECN2A8MW95 431 aa28.91■■■□□ 2.22
CPNE1-205ENST00000401607 CYP3A4P08684 503 aa28.91■■■□□ 2.22
CPNE1-205ENST00000401607 CIITAP33076 1130 aa28.91■■■□□ 2.22
CPNE1-205ENST00000401607 GJA10Q969M2 543 aa28.91■■■□□ 2.22
CPNE1-205ENST00000401607 PLIN2Q99541 437 aa28.91■■■□□ 2.22
CPNE1-205ENST00000401607 RAVER2Q9HCJ3 691 aaKnown RBP28.91■■■□□ 2.22
CPNE1-205ENST00000401607 POTEMA6NI47 508 aa28.9■■■□□ 2.22
CPNE1-205ENST00000401607 PLCG1P19174 1290 aa28.9■■■□□ 2.22
CPNE1-205ENST00000401607 Q4G0T1 1027 aa28.9■■■□□ 2.22
CPNE1-205ENST00000401607 CLEC4DQ8WXI8 215 aa28.9■■■□□ 2.22
CPNE1-205ENST00000401607 LENG9Q96B70 501 aa28.9■■■□□ 2.22
CPNE1-205ENST00000401607 FAM86B1E9PN63 330 aa28.9■■■□□ 2.22
CPNE1-205ENST00000401607 GTPBP6O43824 516 aaPredicted RBP28.9■■■□□ 2.22
CPNE1-205ENST00000401607 PPP1R12BO60237 982 aaPredicted RBP28.9■■■□□ 2.22
CPNE1-205ENST00000401607 FAM86B2P0C5J1 330 aa28.9■■■□□ 2.22
CPNE1-205ENST00000401607 CPXCR1Q8N123 301 aa28.9■■■□□ 2.22
CPNE1-205ENST00000401607 ATG4CQ96DT6 458 aa28.9■■■□□ 2.22
CPNE1-205ENST00000401607 CDCA5Q96FF9 252 aa28.9■■■□□ 2.22
CPNE1-205ENST00000401607 RAB34Q9BZG1 259 aa28.9■■■□□ 2.22
CPNE1-205ENST00000401607 SCN4AP35499 1836 aa28.9■■■□□ 2.22
CPNE1-205ENST00000401607 CUL4BQ13620 913 aa28.89■■■□□ 2.22
CPNE1-205ENST00000401607 BLZF1Q9H2G9 400 aa28.89■■■□□ 2.22
CPNE1-205ENST00000401607 HSD17B4P51659 736 aa28.88■■■□□ 2.21
CPNE1-205ENST00000401607 NCAPHQ15003 741 aa28.88■■■□□ 2.21
CPNE1-205ENST00000401607 ETNPPLQ8TBG4 499 aa28.88■■■□□ 2.21
CPNE1-205ENST00000401607 WNK4Q96J92 1243 aa28.88■■■□□ 2.21
CPNE1-205ENST00000401607 GSDMAQ96QA5 445 aa28.88■■■□□ 2.21
CPNE1-205ENST00000401607 CUEDC2Q9H467 287 aa28.88■■■□□ 2.21
CPNE1-205ENST00000401607 TAF1DQ9H5J8 278 aaPredicted RBP28.88■■■□□ 2.21
CPNE1-205ENST00000401607 POTECB2RU33 542 aa28.88■■■□□ 2.21
CPNE1-205ENST00000401607 VWA5AO00534 786 aa28.88■■■□□ 2.21
CPNE1-205ENST00000401607 NFIBO00712 420 aa28.88■■■□□ 2.21
CPNE1-205ENST00000401607 FDX1P10109 184 aa28.88■■■□□ 2.21
CPNE1-205ENST00000401607 GHRHRQ02643 423 aa28.88■■■□□ 2.21
CPNE1-205ENST00000401607 PRR16Q569H4 304 aa28.88■■■□□ 2.21
CPNE1-205ENST00000401607 SH3D19Q5HYK7 790 aa28.88■■■□□ 2.21
CPNE1-205ENST00000401607 KBTBD4Q9NVX7 518 aa28.88■■■□□ 2.21
CPNE1-205ENST00000401607 PCDHA12Q9UN75 941 aa28.88■■■□□ 2.21
CPNE1-205ENST00000401607 MARCH6O60337 910 aa28.87■■■□□ 2.21
CPNE1-205ENST00000401607 ZBED4O75132 1171 aa28.87■■■□□ 2.21
CPNE1-205ENST00000401607 GRB10Q13322 594 aa28.87■■■□□ 2.21
CPNE1-205ENST00000401607 PNMA5Q96PV4 448 aa28.87■■■□□ 2.21
CPNE1-205ENST00000401607 TMOD4Q9NZQ9 345 aa28.87■■■□□ 2.21
CPNE1-205ENST00000401607 ALAS1P13196 640 aa28.86■■■□□ 2.21
CPNE1-205ENST00000401607 MLKLQ8NB16 471 aa28.86■■■□□ 2.21
CPNE1-205ENST00000401607 REPS2Q8NFH8 660 aa28.86■■■□□ 2.21
CPNE1-205ENST00000401607 CALML4Q96GE6 196 aa28.86■■■□□ 2.21
CPNE1-205ENST00000401607 UIMC1Q96RL1 719 aa28.86■■■□□ 2.21
CPNE1-205ENST00000401607 NUDT12Q9BQG2 462 aa28.86■■■□□ 2.21
CPNE1-205ENST00000401607 CSADQ9Y600 493 aa28.86■■■□□ 2.21
CPNE1-205ENST00000401607 IKBKBO14920 756 aa28.85■■■□□ 2.21
CPNE1-205ENST00000401607 TBX3O15119 743 aa28.85■■■□□ 2.21
CPNE1-205ENST00000401607 DSG3P32926 999 aa28.85■■■□□ 2.21
CPNE1-205ENST00000401607 IREB2P48200 963 aaKnown RBP28.85■■■□□ 2.21
CPNE1-205ENST00000401607 SARM1Q6SZW1 724 aa28.85■■■□□ 2.21
CPNE1-205ENST00000401607 SLFN12Q8IYM2 578 aa28.85■■■□□ 2.21
CPNE1-205ENST00000401607 CNKSR2Q8WXI2 1034 aa28.85■■■□□ 2.21
CPNE1-205ENST00000401607 TRIM44Q96DX7 344 aaPredicted RBP28.85■■■□□ 2.21
CPNE1-205ENST00000401607 MAGEF1Q9HAY2 307 aa28.85■■■□□ 2.21
CPNE1-205ENST00000401607 ADAMTS5Q9UNA0 930 aa28.85■■■□□ 2.21
CPNE1-205ENST00000401607 RBBP6Q7Z6E9 1792 aaKnown RBP28.85■■■□□ 2.21
CPNE1-205ENST00000401607 IGLV3-22A0A075B6J6 115 aa28.85■■■□□ 2.21
CPNE1-205ENST00000401607 MUM1L1Q5H9M0 696 aa28.85■■■□□ 2.21
CPNE1-205ENST00000401607 CATSPERGQ6ZRH7 1159 aa28.85■■■□□ 2.21
CPNE1-205ENST00000401607 CYP2W1Q8TAV3 490 aa28.85■■■□□ 2.21
CPNE1-205ENST00000401607 RBM46Q8TBY0 533 aaKnown RBP28.85■■■□□ 2.21
CPNE1-205ENST00000401607 SNX29Q8TEQ0 813 aa28.85■■■□□ 2.21
CPNE1-205ENST00000401607 PTPRFP10586 1907 aa28.85■■■□□ 2.21
CPNE1-205ENST00000401607 COL11A1P12107 1806 aaPredicted RBP28.84■■■□□ 2.21
CPNE1-205ENST00000401607 SMTNL1A8MU46 457 aa28.84■■■□□ 2.21
CPNE1-205ENST00000401607 EAPPQ56P03 285 aaPredicted RBP28.84■■■□□ 2.21
CPNE1-205ENST00000401607 EHMT1Q9H9B1 1298 aa28.84■■■□□ 2.21
CPNE1-205ENST00000401607 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.84■■■□□ 2.21
CPNE1-205ENST00000401607 COL20A1Q9P218 1284 aa28.84■■■□□ 2.21
CPNE1-205ENST00000401607 PNMA2Q9UL42 364 aa28.84■■■□□ 2.21
CPNE1-205ENST00000401607 CTDP1Q9Y5B0 961 aaPredicted RBP28.84■■■□□ 2.21
CPNE1-205ENST00000401607 IQCA1LA6NCM1 817 aa28.83■■■□□ 2.21
CPNE1-205ENST00000401607 KRT79Q5XKE5 535 aa28.83■■■□□ 2.21
CPNE1-205ENST00000401607 PLA2G4DQ86XP0 818 aa28.83■■■□□ 2.21
CPNE1-205ENST00000401607 MCF2L2Q86YR7 1114 aa28.83■■■□□ 2.21
CPNE1-205ENST00000401607 ZNF76P36508 570 aa28.83■■■□□ 2.21
CPNE1-205ENST00000401607 ZNF75DP51815 510 aa28.83■■■□□ 2.21
CPNE1-205ENST00000401607 UBXN2AP68543 259 aa28.83■■■□□ 2.21
CPNE1-205ENST00000401607 COG2Q14746 738 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms